RNA–Protein interactions for RNA: ENST00000530209.5

GATD1-212, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 4

Gene GATD1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-212ENST00000530209 NISCHQ9Y2I1 1504 aa34.54■■■■□ 3.12
GATD1-212ENST00000530209 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
GATD1-212ENST00000530209 ABCC9O60706 1549 aa30.98■■■□□ 2.55
GATD1-212ENST00000530209 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
GATD1-212ENST00000530209 NACADO15069 1562 aa29.36■■■□□ 2.29
GATD1-212ENST00000530209 DCAF8L2P0C7V8 631 aa29.13■■■□□ 2.25
GATD1-212ENST00000530209 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
GATD1-212ENST00000530209 MYO15BQ96JP2 1530 aa28.98■■■□□ 2.23
GATD1-212ENST00000530209 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.22
GATD1-212ENST00000530209 PABPN1Q86U42 306 aaKnown RBP eCLIP28.84■■■□□ 2.21
GATD1-212ENST00000530209 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
GATD1-212ENST00000530209 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
GATD1-212ENST00000530209 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
GATD1-212ENST00000530209 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
GATD1-212ENST00000530209 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
GATD1-212ENST00000530209 CC2D2AQ9P2K1 1620 aa28.03■■■□□ 2.08
GATD1-212ENST00000530209 EIF4G1Q04637 1599 aaKnown RBP27.96■■■□□ 2.07
GATD1-212ENST00000530209 CECR2Q9BXF3 1484 aa27.95■■■□□ 2.06
GATD1-212ENST00000530209 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
GATD1-212ENST00000530209 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
GATD1-212ENST00000530209 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
GATD1-212ENST00000530209 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
GATD1-212ENST00000530209 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
GATD1-212ENST00000530209 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
GATD1-212ENST00000530209 BAZ1AQ9NRL2 1556 aaPredicted RBP26.81■■□□□ 1.88
GATD1-212ENST00000530209 CUX2O14529 1486 aa26.79■■□□□ 1.88
GATD1-212ENST00000530209 ERCC6Q03468 1493 aa26.78■■□□□ 1.88
GATD1-212ENST00000530209 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
GATD1-212ENST00000530209 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.87
GATD1-212ENST00000530209 NESP48681 1621 aa26.6■■□□□ 1.85
GATD1-212ENST00000530209 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
GATD1-212ENST00000530209 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
GATD1-212ENST00000530209 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
GATD1-212ENST00000530209 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
GATD1-212ENST00000530209 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
GATD1-212ENST00000530209 WIZO95785 1651 aa26.26■■□□□ 1.79
GATD1-212ENST00000530209 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
GATD1-212ENST00000530209 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
GATD1-212ENST00000530209 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
GATD1-212ENST00000530209 WDR62O43379 1518 aa26.02■■□□□ 1.76
GATD1-212ENST00000530209 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
GATD1-212ENST00000530209 CFTRP13569 1480 aa25.95■■□□□ 1.74
GATD1-212ENST00000530209 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
GATD1-212ENST00000530209 FANCD2Q9BXW9 1451 aa25.93■■□□□ 1.74
GATD1-212ENST00000530209 PRDM2Q13029 1718 aa25.73■■□□□ 1.71
GATD1-212ENST00000530209 URB2Q14146 1524 aaKnown RBP25.71■■□□□ 1.71
GATD1-212ENST00000530209 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
GATD1-212ENST00000530209 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
GATD1-212ENST00000530209 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
GATD1-212ENST00000530209 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
GATD1-212ENST00000530209 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
GATD1-212ENST00000530209 TOPBP1Q92547 1522 aa25.44■■□□□ 1.66
GATD1-212ENST00000530209 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
GATD1-212ENST00000530209 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
GATD1-212ENST00000530209 EIF4G3O43432 1585 aaKnown RBP25.25■■□□□ 1.63
GATD1-212ENST00000530209 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
GATD1-212ENST00000530209 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
GATD1-212ENST00000530209 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
GATD1-212ENST00000530209 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
GATD1-212ENST00000530209 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
GATD1-212ENST00000530209 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.621e-7■■■■■ 31.9
GATD1-212ENST00000530209 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
GATD1-212ENST00000530209 CHD1O14646 1710 aa25.1■■□□□ 1.61
GATD1-212ENST00000530209 SOGA1O94964 1423 aa25.08■■□□□ 1.61
GATD1-212ENST00000530209 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
GATD1-212ENST00000530209 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
GATD1-212ENST00000530209 FBLN2P98095 1184 aa25.01■■□□□ 1.59
GATD1-212ENST00000530209 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
GATD1-212ENST00000530209 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
GATD1-212ENST00000530209 CUX1P39880 1505 aa24.97■■□□□ 1.59
GATD1-212ENST00000530209 CYB5RLQ6IPT4 315 aa24.95■■□□□ 1.58
GATD1-212ENST00000530209 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.58
GATD1-212ENST00000530209 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.57
GATD1-212ENST00000530209 GRIN2BQ13224 1484 aa24.87■■□□□ 1.57
GATD1-212ENST00000530209 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
GATD1-212ENST00000530209 ARAP1Q96P48 1450 aa24.85■■□□□ 1.57
GATD1-212ENST00000530209 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
GATD1-212ENST00000530209 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
GATD1-212ENST00000530209 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
GATD1-212ENST00000530209 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
GATD1-212ENST00000530209 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
GATD1-212ENST00000530209 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
GATD1-212ENST00000530209 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
GATD1-212ENST00000530209 ABCA5Q8WWZ7 1642 aa24.69■■□□□ 1.54
GATD1-212ENST00000530209 TRHP20396 242 aaPredicted RBP24.67■■□□□ 1.54
GATD1-212ENST00000530209 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
GATD1-212ENST00000530209 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
GATD1-212ENST00000530209 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
GATD1-212ENST00000530209 GRIN2AQ12879 1464 aa24.53■■□□□ 1.52
GATD1-212ENST00000530209 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
GATD1-212ENST00000530209 NUP160Q12769 1436 aa24.47■■□□□ 1.51
GATD1-212ENST00000530209 FHAD1B1AJZ9 1412 aa24.46■■□□□ 1.51
GATD1-212ENST00000530209 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.5
GATD1-212ENST00000530209 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
GATD1-212ENST00000530209 SHROOM2Q13796 1616 aa24.37■■□□□ 1.49
GATD1-212ENST00000530209 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
GATD1-212ENST00000530209 JPH4Q96JJ6 628 aa24.25■■□□□ 1.47
GATD1-212ENST00000530209 PRG4Q92954 1404 aaPredicted RBP24.22■■□□□ 1.47
GATD1-212ENST00000530209 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
GATD1-212ENST00000530209 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms