RNA–Protein interactions for RNA: ENST00000600480.1

KHSRP-212, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-212ENST00000600480 NISCHQ9Y2I1 1504 aa39.03■■■■□ 3.84
KHSRP-212ENST00000600480 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
KHSRP-212ENST00000600480 ABCC9O60706 1549 aa34.29■■■■□ 3.08
KHSRP-212ENST00000600480 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
KHSRP-212ENST00000600480 NACADO15069 1562 aa32.77■■■□□ 2.84
KHSRP-212ENST00000600480 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
KHSRP-212ENST00000600480 MYO15BQ96JP2 1530 aa32.47■■■□□ 2.79
KHSRP-212ENST00000600480 ZCCHC6Q5VYS8 1495 aaKnown RBP32.45■■■□□ 2.79
KHSRP-212ENST00000600480 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
KHSRP-212ENST00000600480 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
KHSRP-212ENST00000600480 PABPN1Q86U42 306 aaKnown RBP eCLIP31.99■■■□□ 2.71
KHSRP-212ENST00000600480 BICRAQ9NZM4 1560 aa31.94■■■□□ 2.7
KHSRP-212ENST00000600480 SCRIBQ14160 1630 aa31.77■■■□□ 2.68
KHSRP-212ENST00000600480 DNAJC5BQ9UF47 199 aa31.73■■■□□ 2.67
KHSRP-212ENST00000600480 SHROOM4Q9ULL8 1493 aa31.47■■■□□ 2.63
KHSRP-212ENST00000600480 EIF4G1Q04637 1599 aaKnown RBP31.08■■■□□ 2.57
KHSRP-212ENST00000600480 CC2D2AQ9P2K1 1620 aa31.04■■■□□ 2.56
KHSRP-212ENST00000600480 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.52
KHSRP-212ENST00000600480 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
KHSRP-212ENST00000600480 BAZ1AQ9NRL2 1556 aaPredicted RBP30.24■■■□□ 2.43
KHSRP-212ENST00000600480 NCAPD3P42695 1498 aa30.23■■■□□ 2.43
KHSRP-212ENST00000600480 ATAD2BQ9ULI0 1458 aa30.22■■■□□ 2.43
KHSRP-212ENST00000600480 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
KHSRP-212ENST00000600480 MROH2BQ7Z745 1585 aa30.1■■■□□ 2.41
KHSRP-212ENST00000600480 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
KHSRP-212ENST00000600480 PEG3Q9GZU2 1588 aa30.05■■■□□ 2.4
KHSRP-212ENST00000600480 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
KHSRP-212ENST00000600480 WIZO95785 1651 aa29.8■■■□□ 2.36
KHSRP-212ENST00000600480 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
KHSRP-212ENST00000600480 NESP48681 1621 aa29.63■■■□□ 2.33
KHSRP-212ENST00000600480 ERCC6Q03468 1493 aa29.53■■■□□ 2.32
KHSRP-212ENST00000600480 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
KHSRP-212ENST00000600480 TOP2AP11388 1531 aaKnown RBP29.4■■■□□ 2.3
KHSRP-212ENST00000600480 KIF21AQ7Z4S6 1674 aa29.33■■■□□ 2.29
KHSRP-212ENST00000600480 CADPSQ9ULU8 1353 aa29.32■■■□□ 2.28
KHSRP-212ENST00000600480 CUX2O14529 1486 aa29.31■■■□□ 2.28
KHSRP-212ENST00000600480 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
KHSRP-212ENST00000600480 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
KHSRP-212ENST00000600480 CFTRP13569 1480 aa29.11■■■□□ 2.25
KHSRP-212ENST00000600480 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
KHSRP-212ENST00000600480 PRDM2Q13029 1718 aa29■■■□□ 2.23
KHSRP-212ENST00000600480 FANCD2Q9BXW9 1451 aa29■■■□□ 2.23
KHSRP-212ENST00000600480 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
KHSRP-212ENST00000600480 CEP164Q9UPV0 1460 aa28.97■■■□□ 2.23
KHSRP-212ENST00000600480 WDR62O43379 1518 aa28.93■■■□□ 2.22
KHSRP-212ENST00000600480 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
KHSRP-212ENST00000600480 DNAJC5Q9H3Z4 198 aa28.71■■■□□ 2.19
KHSRP-212ENST00000600480 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
KHSRP-212ENST00000600480 TOPBP1Q92547 1522 aa28.53■■■□□ 2.16
KHSRP-212ENST00000600480 DNMBPQ6XZF7 1577 aa28.48■■■□□ 2.15
KHSRP-212ENST00000600480 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
KHSRP-212ENST00000600480 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
KHSRP-212ENST00000600480 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
KHSRP-212ENST00000600480 TARBP1Q13395 1621 aaKnown RBP28.28■■■□□ 2.12
KHSRP-212ENST00000600480 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
KHSRP-212ENST00000600480 CUX1P39880 1505 aa28.24■■■□□ 2.11
KHSRP-212ENST00000600480 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.11
KHSRP-212ENST00000600480 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
KHSRP-212ENST00000600480 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
KHSRP-212ENST00000600480 SOGA1O94964 1423 aa28.12■■■□□ 2.09
KHSRP-212ENST00000600480 AQRO60306 1485 aaKnown RBP eCLIP28.11■■■□□ 2.092e-6■□□□□ 10.2
KHSRP-212ENST00000600480 OSCARQ8IYS5 282 aa28.04■■■□□ 2.08
KHSRP-212ENST00000600480 WDR97A6NE52 1622 aa28.01■■■□□ 2.07
KHSRP-212ENST00000600480 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
KHSRP-212ENST00000600480 CHD1O14646 1710 aa27.96■■■□□ 2.07
KHSRP-212ENST00000600480 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
KHSRP-212ENST00000600480 TOP2BQ02880 1626 aa27.94■■■□□ 2.06
KHSRP-212ENST00000600480 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
KHSRP-212ENST00000600480 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
KHSRP-212ENST00000600480 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
KHSRP-212ENST00000600480 PBRM1Q86U86 1689 aa27.85■■■□□ 2.05
KHSRP-212ENST00000600480 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
KHSRP-212ENST00000600480 ABCA5Q8WWZ7 1642 aa27.82■■■□□ 2.04
KHSRP-212ENST00000600480 GRIN2BQ13224 1484 aa27.82■■■□□ 2.04
KHSRP-212ENST00000600480 GAPVD1Q14C86 1478 aa27.8■■■□□ 2.04
KHSRP-212ENST00000600480 FBLN2P98095 1184 aa27.78■■■□□ 2.04
KHSRP-212ENST00000600480 MAGI1Q96QZ7 1491 aaPredicted RBP27.77■■■□□ 2.04
KHSRP-212ENST00000600480 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.03
KHSRP-212ENST00000600480 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.03
KHSRP-212ENST00000600480 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.03
KHSRP-212ENST00000600480 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
KHSRP-212ENST00000600480 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
KHSRP-212ENST00000600480 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
KHSRP-212ENST00000600480 ARHGEF11O15085 1522 aa27.63■■■□□ 2.01
KHSRP-212ENST00000600480 CLASP1Q7Z460 1538 aa27.58■■■□□ 2.01
KHSRP-212ENST00000600480 ADAMTS12P58397 1594 aa27.56■■■□□ 2
KHSRP-212ENST00000600480 ERICH3Q5RHP9 1530 aa27.53■■■□□ 2
KHSRP-212ENST00000600480 GRIN2AQ12879 1464 aa27.48■■□□□ 1.99
KHSRP-212ENST00000600480 FHAD1B1AJZ9 1412 aa27.45■■□□□ 1.98
KHSRP-212ENST00000600480 ARAP1Q96P48 1450 aa27.4■■□□□ 1.98
KHSRP-212ENST00000600480 CEP170Q5SW79 1584 aa27.39■■□□□ 1.98
KHSRP-212ENST00000600480 NUP160Q12769 1436 aa27.36■■□□□ 1.97
KHSRP-212ENST00000600480 CYB5RLQ6IPT4 315 aa27.36■■□□□ 1.97
KHSRP-212ENST00000600480 KIF27Q86VH2 1401 aa27.34■■□□□ 1.97
KHSRP-212ENST00000600480 IGF1RP08069 1367 aa27.29■■□□□ 1.96
KHSRP-212ENST00000600480 CUL7Q14999 1698 aa27.27■■□□□ 1.96
KHSRP-212ENST00000600480 SHROOM2Q13796 1616 aa27.24■■□□□ 1.95
KHSRP-212ENST00000600480 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
KHSRP-212ENST00000600480 RUSC2Q8N2Y8 1516 aa27.16■■□□□ 1.94
KHSRP-212ENST00000600480 CARMIL1Q5VZK9 1371 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms