RNA–Protein interactions for RNA: ENST00000402437.2

MVB12B-202, Transcript of multivesicular body subunit 12B, humanhuman

TSL 3

Gene MVB12B, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-202ENST00000402437 NISCHQ9Y2I1 1504 aa26.06■■□□□ 1.76
MVB12B-202ENST00000402437 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
MVB12B-202ENST00000402437 ABCC9O60706 1549 aa22.52■■□□□ 1.2
MVB12B-202ENST00000402437 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.07
MVB12B-202ENST00000402437 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
MVB12B-202ENST00000402437 NACADO15069 1562 aa21.67■■□□□ 1.06
MVB12B-202ENST00000402437 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
MVB12B-202ENST00000402437 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
MVB12B-202ENST00000402437 DCAF1Q9Y4B6 1507 aa21.54■■□□□ 1.04
MVB12B-202ENST00000402437 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
MVB12B-202ENST00000402437 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
MVB12B-202ENST00000402437 BICRAQ9NZM4 1560 aa21.17■□□□□ 0.98
MVB12B-202ENST00000402437 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
MVB12B-202ENST00000402437 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
MVB12B-202ENST00000402437 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
MVB12B-202ENST00000402437 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
MVB12B-202ENST00000402437 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
MVB12B-202ENST00000402437 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
MVB12B-202ENST00000402437 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
MVB12B-202ENST00000402437 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
MVB12B-202ENST00000402437 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
MVB12B-202ENST00000402437 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
MVB12B-202ENST00000402437 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
MVB12B-202ENST00000402437 SMARCA2P51531 1590 aa20■□□□□ 0.79
MVB12B-202ENST00000402437 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
MVB12B-202ENST00000402437 WIZO95785 1651 aa19.97■□□□□ 0.79
MVB12B-202ENST00000402437 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
MVB12B-202ENST00000402437 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
MVB12B-202ENST00000402437 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
MVB12B-202ENST00000402437 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
MVB12B-202ENST00000402437 NESP48681 1621 aa19.58■□□□□ 0.73
MVB12B-202ENST00000402437 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
MVB12B-202ENST00000402437 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
MVB12B-202ENST00000402437 KIF21AQ7Z4S6 1674 aa19.43■□□□□ 0.7
MVB12B-202ENST00000402437 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
MVB12B-202ENST00000402437 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
MVB12B-202ENST00000402437 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
MVB12B-202ENST00000402437 CFTRP13569 1480 aa19.33■□□□□ 0.68
MVB12B-202ENST00000402437 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
MVB12B-202ENST00000402437 ERCC6Q03468 1493 aa19.3■□□□□ 0.68
MVB12B-202ENST00000402437 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
MVB12B-202ENST00000402437 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
MVB12B-202ENST00000402437 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
MVB12B-202ENST00000402437 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
MVB12B-202ENST00000402437 WDR62O43379 1518 aa19.1■□□□□ 0.65
MVB12B-202ENST00000402437 CUX2O14529 1486 aa19.09■□□□□ 0.65
MVB12B-202ENST00000402437 URB2Q14146 1524 aaKnown RBP19.08■□□□□ 0.64
MVB12B-202ENST00000402437 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
MVB12B-202ENST00000402437 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
MVB12B-202ENST00000402437 CUX1P39880 1505 aa18.89■□□□□ 0.61
MVB12B-202ENST00000402437 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
MVB12B-202ENST00000402437 TARBP1Q13395 1621 aaKnown RBP18.8■□□□□ 0.6
MVB12B-202ENST00000402437 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
MVB12B-202ENST00000402437 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
MVB12B-202ENST00000402437 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
MVB12B-202ENST00000402437 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
MVB12B-202ENST00000402437 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
MVB12B-202ENST00000402437 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
MVB12B-202ENST00000402437 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
MVB12B-202ENST00000402437 IFT140Q96RY7 1462 aa18.72■□□□□ 0.59
MVB12B-202ENST00000402437 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
MVB12B-202ENST00000402437 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
MVB12B-202ENST00000402437 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
MVB12B-202ENST00000402437 SOGA1O94964 1423 aa18.62■□□□□ 0.57
MVB12B-202ENST00000402437 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.571e-9■■■□□ 15
MVB12B-202ENST00000402437 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
MVB12B-202ENST00000402437 ABCA10Q8WWZ4 1543 aa18.56■□□□□ 0.56
MVB12B-202ENST00000402437 PBRM1Q86U86 1689 aa18.56■□□□□ 0.56
MVB12B-202ENST00000402437 TDRD9Q8NDG6 1382 aaKnown RBP18.54■□□□□ 0.56
MVB12B-202ENST00000402437 CHD1O14646 1710 aa18.5■□□□□ 0.55
MVB12B-202ENST00000402437 GAPVD1Q14C86 1478 aa18.45■□□□□ 0.54
MVB12B-202ENST00000402437 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
MVB12B-202ENST00000402437 GRIN2BQ13224 1484 aa18.41■□□□□ 0.54
MVB12B-202ENST00000402437 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
MVB12B-202ENST00000402437 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
MVB12B-202ENST00000402437 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.52
MVB12B-202ENST00000402437 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
MVB12B-202ENST00000402437 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
MVB12B-202ENST00000402437 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
MVB12B-202ENST00000402437 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
MVB12B-202ENST00000402437 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
MVB12B-202ENST00000402437 CUL7Q14999 1698 aa18.22■□□□□ 0.51
MVB12B-202ENST00000402437 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
MVB12B-202ENST00000402437 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
MVB12B-202ENST00000402437 FBLN2P98095 1184 aa18.21■□□□□ 0.51
MVB12B-202ENST00000402437 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
MVB12B-202ENST00000402437 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
MVB12B-202ENST00000402437 IGF1RP08069 1367 aa18.2■□□□□ 0.5
MVB12B-202ENST00000402437 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
MVB12B-202ENST00000402437 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
MVB12B-202ENST00000402437 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
MVB12B-202ENST00000402437 RIMBP3CA6NJZ7 1639 aa18.14■□□□□ 0.49
MVB12B-202ENST00000402437 RIMBP3BA6NNM3 1639 aa18.14■□□□□ 0.49
MVB12B-202ENST00000402437 RIMBP3Q9UFD9 1639 aa18.14■□□□□ 0.49
MVB12B-202ENST00000402437 NUP160Q12769 1436 aa18.14■□□□□ 0.49
MVB12B-202ENST00000402437 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
MVB12B-202ENST00000402437 SHROOM2Q13796 1616 aa18.08■□□□□ 0.48
MVB12B-202ENST00000402437 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
MVB12B-202ENST00000402437 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
MVB12B-202ENST00000402437 PRXQ9BXM0 1461 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms