RNA–Protein interactions for RNA: ENST00000542142.1

MMP17-208, Transcript of matrix metallopeptidase 17, humanhuman

TSL 4

Gene MMP17, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-208ENST00000542142 NISCHQ9Y2I1 1504 aa38.01■■■■□ 3.67
MMP17-208ENST00000542142 CCDC180Q9P1Z9 1646 aa33.76■■■■□ 3
MMP17-208ENST00000542142 ABCC9O60706 1549 aa33.09■■■□□ 2.89
MMP17-208ENST00000542142 RB1CC1Q8TDY2 1594 aa31.82■■■□□ 2.68
MMP17-208ENST00000542142 NACADO15069 1562 aa31.79■■■□□ 2.68
MMP17-208ENST00000542142 DCAF8L2P0C7V8 631 aa31.78■■■□□ 2.68
MMP17-208ENST00000542142 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
MMP17-208ENST00000542142 MYO15BQ96JP2 1530 aa31.61■■■□□ 2.65
MMP17-208ENST00000542142 DCAF1Q9Y4B6 1507 aa31.46■■■□□ 2.63
MMP17-208ENST00000542142 UNC13AQ9UPW8 1703 aa31.01■■■□□ 2.55
MMP17-208ENST00000542142 PABPN1Q86U42 306 aaKnown RBP eCLIP30.94■■■□□ 2.54
MMP17-208ENST00000542142 BICRAQ9NZM4 1560 aa30.84■■■□□ 2.53
MMP17-208ENST00000542142 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
MMP17-208ENST00000542142 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
MMP17-208ENST00000542142 DNAJC5BQ9UF47 199 aa30.42■■■□□ 2.46
MMP17-208ENST00000542142 EIF4G1Q04637 1599 aaKnown RBP30.04■■■□□ 2.4
MMP17-208ENST00000542142 CC2D2AQ9P2K1 1620 aa29.92■■■□□ 2.38
MMP17-208ENST00000542142 CECR2Q9BXF3 1484 aa29.75■■■□□ 2.35
MMP17-208ENST00000542142 SMARCA4P51532 1647 aa29.47■■■□□ 2.31
MMP17-208ENST00000542142 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
MMP17-208ENST00000542142 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
MMP17-208ENST00000542142 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
MMP17-208ENST00000542142 SMARCA2P51531 1590 aa29.31■■■□□ 2.28
MMP17-208ENST00000542142 MROH2BQ7Z745 1585 aa29.28■■■□□ 2.28
MMP17-208ENST00000542142 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
MMP17-208ENST00000542142 HMGXB3Q12766 1538 aa29.19■■■□□ 2.26
MMP17-208ENST00000542142 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
MMP17-208ENST00000542142 RSF1Q96T23 1441 aaPredicted RBP28.96■■■□□ 2.23
MMP17-208ENST00000542142 WIZO95785 1651 aa28.93■■■□□ 2.22
MMP17-208ENST00000542142 TOP2AP11388 1531 aaKnown RBP28.66■■■□□ 2.18
MMP17-208ENST00000542142 NESP48681 1621 aa28.62■■■□□ 2.17
MMP17-208ENST00000542142 LAMC3Q9Y6N6 1575 aa28.55■■■□□ 2.16
MMP17-208ENST00000542142 ERCC6Q03468 1493 aa28.53■■■□□ 2.16
MMP17-208ENST00000542142 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
MMP17-208ENST00000542142 PDS5BQ9NTI5 1447 aa28.4■■■□□ 2.14
MMP17-208ENST00000542142 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
MMP17-208ENST00000542142 CFTRP13569 1480 aa28.32■■■□□ 2.12
MMP17-208ENST00000542142 CUX2O14529 1486 aa28.25■■■□□ 2.11
MMP17-208ENST00000542142 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
MMP17-208ENST00000542142 SUPT5HO00267 1087 aaKnown RBP28.2■■■□□ 2.1
MMP17-208ENST00000542142 THOC2Q8NI27 1593 aaKnown RBP28.17■■■□□ 2.1
MMP17-208ENST00000542142 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
MMP17-208ENST00000542142 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
MMP17-208ENST00000542142 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
MMP17-208ENST00000542142 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
MMP17-208ENST00000542142 WDR62O43379 1518 aa27.98■■■□□ 2.07
MMP17-208ENST00000542142 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
MMP17-208ENST00000542142 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
MMP17-208ENST00000542142 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
MMP17-208ENST00000542142 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
MMP17-208ENST00000542142 IFT140Q96RY7 1462 aa27.54■■■□□ 2
MMP17-208ENST00000542142 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
MMP17-208ENST00000542142 CUX1P39880 1505 aa27.47■■□□□ 1.99
MMP17-208ENST00000542142 POLA1P09884 1462 aaPredicted RBP27.46■■□□□ 1.99
MMP17-208ENST00000542142 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
MMP17-208ENST00000542142 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
MMP17-208ENST00000542142 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
MMP17-208ENST00000542142 SOGA1O94964 1423 aa27.36■■□□□ 1.97
MMP17-208ENST00000542142 RAD54L2Q9Y4B4 1467 aa27.33■■□□□ 1.97
MMP17-208ENST00000542142 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
MMP17-208ENST00000542142 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
MMP17-208ENST00000542142 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.953e-7■■■■■ 27.5
MMP17-208ENST00000542142 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
MMP17-208ENST00000542142 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
MMP17-208ENST00000542142 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
MMP17-208ENST00000542142 BIVM-ERCC5R4GMW8 1640 aa27.2■■□□□ 1.95
MMP17-208ENST00000542142 WDR97A6NE52 1622 aa27.17■■□□□ 1.94
MMP17-208ENST00000542142 ABCA10Q8WWZ4 1543 aa27.13■■□□□ 1.93
MMP17-208ENST00000542142 OSCARQ8IYS5 282 aa27.1■■□□□ 1.93
MMP17-208ENST00000542142 GRIN2BQ13224 1484 aa27.05■■□□□ 1.92
MMP17-208ENST00000542142 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
MMP17-208ENST00000542142 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
MMP17-208ENST00000542142 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
MMP17-208ENST00000542142 MAGI1Q96QZ7 1491 aaPredicted RBP26.97■■□□□ 1.91
MMP17-208ENST00000542142 FBLN2P98095 1184 aa26.95■■□□□ 1.9
MMP17-208ENST00000542142 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
MMP17-208ENST00000542142 CHD1O14646 1710 aa26.89■■□□□ 1.9
MMP17-208ENST00000542142 CHMP7Q8WUX9 453 aaPredicted RBP26.88■■□□□ 1.89
MMP17-208ENST00000542142 SYNJ2O15056 1496 aa26.87■■□□□ 1.89
MMP17-208ENST00000542142 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
MMP17-208ENST00000542142 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
MMP17-208ENST00000542142 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
MMP17-208ENST00000542142 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
MMP17-208ENST00000542142 GRIN2AQ12879 1464 aa26.68■■□□□ 1.86
MMP17-208ENST00000542142 CLASP1Q7Z460 1538 aa26.66■■□□□ 1.86
MMP17-208ENST00000542142 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
MMP17-208ENST00000542142 IGF1RP08069 1367 aa26.65■■□□□ 1.86
MMP17-208ENST00000542142 ARHGEF11O15085 1522 aa26.63■■□□□ 1.85
MMP17-208ENST00000542142 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
MMP17-208ENST00000542142 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
MMP17-208ENST00000542142 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
MMP17-208ENST00000542142 NUP160Q12769 1436 aa26.58■■□□□ 1.85
MMP17-208ENST00000542142 CEP170Q5SW79 1584 aa26.53■■□□□ 1.84
MMP17-208ENST00000542142 CUL7Q14999 1698 aa26.53■■□□□ 1.84
MMP17-208ENST00000542142 CARMIL1Q5VZK9 1371 aa26.48■■□□□ 1.83
MMP17-208ENST00000542142 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
MMP17-208ENST00000542142 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
MMP17-208ENST00000542142 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
MMP17-208ENST00000542142 SHROOM2Q13796 1616 aa26.35■■□□□ 1.81
MMP17-208ENST00000542142 KIAA0586Q9BVV6 1533 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms