Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP11P51784 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.68■■□□□ 1.22
USP11P51784 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP11P51784 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
USP11P51784 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP11P51784 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP11P51784 KRT17P3-201ENST00000420566 1262 ntBASIC22.68■■□□□ 1.22
USP11P51784 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP11P51784 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.68■■□□□ 1.22
USP11P51784 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.68■■□□□ 1.22
USP11P51784 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
USP11P51784 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
USP11P51784 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP11P51784 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.68■■□□□ 1.22
USP11P51784 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
USP11P51784 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP11P51784 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.67■■□□□ 1.22
USP11P51784 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.67■■□□□ 1.22
USP11P51784 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.67■■□□□ 1.22
USP11P51784 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.67■■□□□ 1.22
USP11P51784 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 ITM2C-210ENST00000620962 501 ntBASIC22.67■■□□□ 1.22
USP11P51784 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.67■■□□□ 1.22
USP11P51784 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.67■■□□□ 1.22
USP11P51784 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP11P51784 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
USP11P51784 LINC01521-201ENST00000504184 1943 ntBASIC22.67■■□□□ 1.22
USP11P51784 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP11P51784 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.66■■□□□ 1.22
USP11P51784 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP11P51784 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.66■■□□□ 1.22
USP11P51784 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP11P51784 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP11P51784 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP11P51784 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP11P51784 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.66■■□□□ 1.22
USP11P51784 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.66■■□□□ 1.22
USP11P51784 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP11P51784 AC006058.3-201ENST00000606217 1069 ntBASIC22.66■■□□□ 1.22
USP11P51784 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP11P51784 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.66■■□□□ 1.22
USP11P51784 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
USP11P51784 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP11P51784 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
USP11P51784 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP11P51784 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.65■■□□□ 1.22
USP11P51784 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
USP11P51784 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP11P51784 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
USP11P51784 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.65■■□□□ 1.22
USP11P51784 RPS2P52-201ENST00000469610 820 ntBASIC22.65■■□□□ 1.22
USP11P51784 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.65■■□□□ 1.22
USP11P51784 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.65■■□□□ 1.22
USP11P51784 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP11P51784 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.65■■□□□ 1.22
USP11P51784 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.65■■□□□ 1.22
USP11P51784 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP11P51784 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
USP11P51784 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
USP11P51784 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
USP11P51784 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
USP11P51784 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
USP11P51784 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.64■■□□□ 1.22
USP11P51784 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.64■■□□□ 1.22
USP11P51784 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
USP11P51784 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.64■■□□□ 1.21
USP11P51784 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.64■■□□□ 1.21
USP11P51784 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
USP11P51784 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.64■■□□□ 1.21
USP11P51784 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.64■■□□□ 1.21
USP11P51784 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP11P51784 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.63■■□□□ 1.21
USP11P51784 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP11P51784 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP11P51784 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP11P51784 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP11P51784 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP11P51784 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USP11P51784 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USP11P51784 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP11P51784 AC128676.1-201ENST00000454392 318 ntBASIC22.63■■□□□ 1.21
USP11P51784 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.63■■□□□ 1.21
USP11P51784 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms