Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YLR232WYLR232W 348 nt2.15□□□□□ -2.07
PUB1P32588 SGS1YMR190C 4344 nt2.15□□□□□ -2.07
PUB1P32588 UBR1YGR184C 5853 nt2.14□□□□□ -2.07 RIP-Chip
PUB1P32588 YEF3YLR249W 3135 nt2.14□□□□□ -2.07 RIP-Chip
PUB1P32588 YOL098CYOL098C 3114 nt2.14□□□□□ -2.07
PUB1P32588 MSB1YOR188W 3414 nt2.14□□□□□ -2.07
PUB1P32588 AMS1YGL156W 3252 nt2.13□□□□□ -2.07
PUB1P32588 BPH1YCR032W 6504 nt2.13□□□□□ -2.07
PUB1P32588 RTT107YHR154W 3213 nt2.13□□□□□ -2.07
PUB1P32588 NUP100YKL068W 2880 nt2.12□□□□□ -2.07
PUB1P32588 AGC1YPR021C 2709 nt2.11□□□□□ -2.07
PUB1P32588 snR64snR64 101 nt2.11□□□□□ -2.07
PUB1P32588 YKL100W-AYKL100W-A 90 nt2.11□□□□□ -2.07
PUB1P32588 ORC3YLL004W 1851 nt2.1□□□□□ -2.07
PUB1P32588 YER172C-AYER172C-A 381 nt2.1□□□□□ -2.07
PUB1P32588 snR47snR47 99 nt2.1□□□□□ -2.07
PUB1P32588 BUD2YKL092C 3315 nt2.1□□□□□ -2.07
PUB1P32588 SSD1YDR293C 3753 nt2.1□□□□□ -2.07 RIP-Chip
PUB1P32588 ADR1YDR216W 3972 nt2.09□□□□□ -2.07
PUB1P32588 SEC16YPL085W 6588 nt2.09□□□□□ -2.07
PUB1P32588 PSD2YGR170W 3417 nt2.09□□□□□ -2.07
PUB1P32588 SSN2YDR443C 4263 nt2.09□□□□□ -2.07 RIP-Chip
PUB1P32588 DNF1YER166W 4716 nt2.09□□□□□ -2.08
PUB1P32588 YGR146C-AYGR146C-A 162 nt2.08□□□□□ -2.08
PUB1P32588 RTP1YMR185W 2946 nt2.08□□□□□ -2.08
PUB1P32588 POL5YEL055C 3069 nt2.08□□□□□ -2.08
PUB1P32588 TBS1YBR150C 3285 nt2.07□□□□□ -2.08 RIP-Chip
PUB1P32588 COA6YMR244C-A 315 nt2.07□□□□□ -2.08 RIP-Chip
PUB1P32588 YBR196C-AYBR196C-A 150 nt2.07□□□□□ -2.08
PUB1P32588 snR50snR50 90 nt2.07□□□□□ -2.08
PUB1P32588 GEA1YJR031C 4227 nt2.07□□□□□ -2.08
PUB1P32588 SEC21YNL287W 2808 nt2.07□□□□□ -2.08
PUB1P32588 VPS8YAL002W 3825 nt2.06□□□□□ -2.08
PUB1P32588 RSM22YKL155C 1887 nt2.06□□□□□ -2.08
PUB1P32588 ASE1YOR058C 2658 nt2.06□□□□□ -2.08 RIP-Chip
PUB1P32588 GIP3YPL137C 3831 nt2.05□□□□□ -2.08
PUB1P32588 FRK1YPL141C 2598 nt2.05□□□□□ -2.08
PUB1P32588 MET18YIL128W 3099 nt2.05□□□□□ -2.08
PUB1P32588 SCP160YJL080C 3669 nt2.05□□□□□ -2.08
PUB1P32588 TFC3YAL001C 3483 nt2.04□□□□□ -2.08
PUB1P32588 TIM9YEL020W-A 264 nt2.04□□□□□ -2.08
PUB1P32588 BNI1YNL271C 5862 nt2.04□□□□□ -2.08
PUB1P32588 YML002WYML002W 2214 nt2.03□□□□□ -2.08
PUB1P32588 YBR109W-AYBR109W-A 225 nt2.03□□□□□ -2.08
PUB1P32588 SEY1YOR165W 2331 nt2.03□□□□□ -2.08
PUB1P32588 YJR039WYJR039W 3366 nt2.03□□□□□ -2.08
PUB1P32588 UFD4YKL010C 4452 nt2.02□□□□□ -2.09
PUB1P32588 YER078W-AYER078W-A 165 nt2.02□□□□□ -2.09
PUB1P32588 YLR286W-AYLR286W-A 135 nt2.02□□□□□ -2.09
PUB1P32588 CTR9YOL145C 3234 nt2.02□□□□□ -2.09
PUB1P32588 RAV1YJR033C 4074 nt2.01□□□□□ -2.09
PUB1P32588 TRL1YJL087C 2484 nt2.01□□□□□ -2.09
PUB1P32588 YLR419WYLR419W 4308 nt2□□□□□ -2.09
PUB1P32588 FAR11YNL127W 2862 nt2□□□□□ -2.09
PUB1P32588 TOP2YNL088W 4287 nt2□□□□□ -2.09
PUB1P32588 CSF1YLR087C 8877 nt2□□□□□ -2.09
PUB1P32588 NOP9YJL010C 2001 nt2□□□□□ -2.09
PUB1P32588 KOG1YHR186C 4674 nt2□□□□□ -2.09
PUB1P32588 CDC60YPL160W 3273 nt2□□□□□ -2.09
PUB1P32588 NUP170YBL079W 4509 nt2□□□□□ -2.09
PUB1P32588 YJL052C-AYJL052C-A 120 nt2□□□□□ -2.09
PUB1P32588 HIR3YJR140C 4947 nt1.99□□□□□ -2.09
PUB1P32588 TOR2YKL203C 7425 nt1.99□□□□□ -2.09
PUB1P32588 IRE1YHR079C 3348 nt1.98□□□□□ -2.09
PUB1P32588 SYH1YPL105C 2550 nt1.98□□□□□ -2.09
PUB1P32588 YLR041WYLR041W 321 nt1.97□□□□□ -2.09
PUB1P32588 DGR1YNL130C-A 147 nt1.97□□□□□ -2.09
PUB1P32588 SPO24YPR036W-A 204 nt1.97□□□□□ -2.09 RIP-Chip
PUB1P32588 BRE1YDL074C 2103 nt1.96□□□□□ -2.1
PUB1P32588 STH1YIL126W 4080 nt1.95□□□□□ -2.1 RIP-Chip
PUB1P32588 SPP41YDR464W 4308 nt1.95□□□□□ -2.1
PUB1P32588 TOF1YNL273W 3717 nt1.95□□□□□ -2.1
PUB1P32588 PET309YLR067C 2898 nt1.94□□□□□ -2.1
PUB1P32588 RGA1YOR127W 3024 nt1.93□□□□□ -2.1
PUB1P32588 UTP22YGR090W 3714 nt1.93□□□□□ -2.1
PUB1P32588 PIK1YNL267W 3201 nt1.93□□□□□ -2.1
PUB1P32588 ALY2YJL084C 3141 nt1.93□□□□□ -2.1
PUB1P32588 YMR045CYMR045C 5268 nt1.93□□□□□ -2.1
PUB1P32588 TRS130YMR218C 3309 nt1.92□□□□□ -2.1
PUB1P32588 SEC10YLR166C 2616 nt1.92□□□□□ -2.1
PUB1P32588 RPL26BYGR034W 384 nt1.92□□□□□ -2.1
PUB1P32588 RPS29AYLR388W 171 nt1.92□□□□□ -2.1
PUB1P32588 UBP2YOR124C 3819 nt1.92□□□□□ -2.1
PUB1P32588 SMC1YFL008W 3678 nt1.92□□□□□ -2.1
PUB1P32588 AZF1YOR113W 2745 nt1.91□□□□□ -2.1 RIP-Chip
PUB1P32588 MMS4YBR098W 2076 nt1.9□□□□□ -2.1
PUB1P32588 SFB2YNL049C 2631 nt1.9□□□□□ -2.1
PUB1P32588 KRE33YNL132W 3171 nt1.9□□□□□ -2.1
PUB1P32588 INO80YGL150C 4470 nt1.9□□□□□ -2.1 RIP-Chip
PUB1P32588 FKS1YLR342W 5631 nt1.9□□□□□ -2.11 RIP-Chip
PUB1P32588 GCN2YDR283C 4980 nt1.89□□□□□ -2.11
PUB1P32588 snR75snR75 89 nt1.89□□□□□ -2.11
PUB1P32588 YAR009CYAR009C 3591 nt1.88□□□□□ -2.11
PUB1P32588 GYP5YPL249C 2685 nt1.88□□□□□ -2.11
PUB1P32588 MSH6YDR097C 3729 nt1.88□□□□□ -2.11
PUB1P32588 UBP3YER151C 2739 nt1.88□□□□□ -2.11
PUB1P32588 YKL225WYKL225W 348 nt1.88□□□□□ -2.11
PUB1P32588 WAR1YML076C 2835 nt1.88□□□□□ -2.11
PUB1P32588 TRM3YDL112W 4311 nt1.87□□□□□ -2.11
PUB1P32588 SIR4YDR227W 4077 nt1.87□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms