RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C DRS1P32892 752 aaKnown RBP4.44□□□□□ -1.7
HIR3YJR140C MTC1P47018 478 aaKnown RBP4.25□□□□□ -1.73
HIR3YJR140C BFR2Q06631 534 aaKnown RBP3.97□□□□□ -1.77
HIR3YJR140C TFA1P36100 482 aa3.88□□□□□ -1.79
HIR3YJR140C RQC2Q12532 1038 aaKnown RBP3.76□□□□□ -1.81
HIR3YJR140C DIP2Q12220 943 aaPredicted RBP3.71□□□□□ -1.82
HIR3YJR140C AVT3P36062 692 aa3.69□□□□□ -1.82
HIR3YJR140C RSE1Q04693 1361 aaKnown RBP3.52□□□□□ -1.85
HIR3YJR140C ISW2Q08773 1120 aa3.49□□□□□ -1.85
HIR3YJR140C RPG1P38249 964 aaKnown RBP3.33□□□□□ -1.88
HIR3YJR140C RPL17AP05740 184 aaKnown RBP3.32□□□□□ -1.88
HIR3YJR140C RPL17BP46990 184 aaKnown RBP3.32□□□□□ -1.88
HIR3YJR140C REB1P21538 810 aa3.31□□□□□ -1.88
HIR3YJR140C PRI1P10363 409 aa3.28□□□□□ -1.88
HIR3YJR140C AAD16Q02895 342 aa3.25□□□□□ -1.89
HIR3YJR140C FAP1P53971 965 aa3.25□□□□□ -1.89
HIR3YJR140C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
HIR3YJR140C TAF7Q05021 590 aa3.22□□□□□ -1.89
HIR3YJR140C RIM101P33400 625 aa3.21□□□□□ -1.9
HIR3YJR140C DMA1P38823 416 aa3.19□□□□□ -1.9
HIR3YJR140C SSP1P38871 571 aa3.19□□□□□ -1.9
HIR3YJR140C SPT21P35209 758 aa3.17□□□□□ -1.9
HIR3YJR140C PTP3P40048 928 aa3.17□□□□□ -1.9
HIR3YJR140C LEO1P38439 464 aa3.16□□□□□ -1.9
HIR3YJR140C YIL055CP40523 627 aaKnown RBP3.15□□□□□ -1.91
HIR3YJR140C MRPL32P25348 183 aa3.09□□□□□ -1.91
HIR3YJR140C LEU3P08638 886 aa3.08□□□□□ -1.92
HIR3YJR140C TSR3Q12094 313 aaKnown RBP3.08□□□□□ -1.92
HIR3YJR140C MGA2P40578 1113 aa3.07□□□□□ -1.92
HIR3YJR140C RSM7P47150 247 aa3.06□□□□□ -1.92
HIR3YJR140C IFH1P39520 1085 aa3.05□□□□□ -1.92
HIR3YJR140C YAH1Q12184 172 aaKnown RBP3.05□□□□□ -1.92
HIR3YJR140C OXP1P28273 1286 aa3.04□□□□□ -1.92
HIR3YJR140C SAS10Q12136 610 aaPredicted RBP3.04□□□□□ -1.92
HIR3YJR140C BBC1P47068 1157 aa3.03□□□□□ -1.92
HIR3YJR140C CKB1P43639 278 aa3.02□□□□□ -1.93
HIR3YJR140C YLR271WQ06152 274 aa3.01□□□□□ -1.93
HIR3YJR140C RPN1P38764 993 aaKnown RBP3.01□□□□□ -1.93
HIR3YJR140C PRY3P47033 881 aa3□□□□□ -1.93
HIR3YJR140C HGH1P48362 394 aaKnown RBP3□□□□□ -1.93
HIR3YJR140C YKR023WP36119 530 aaKnown RBP2.99□□□□□ -1.93
HIR3YJR140C TFC8Q12308 588 aa2.98□□□□□ -1.93
HIR3YJR140C HAA1Q12753 694 aaKnown RBP2.97□□□□□ -1.93
HIR3YJR140C NOP53Q12080 455 aaKnown RBP2.96□□□□□ -1.94
HIR3YJR140C AI2P03876 854 aa2.96□□□□□ -1.94
HIR3YJR140C PSD2P53037 1138 aaKnown RBP2.95□□□□□ -1.94
HIR3YJR140C YPR148CQ06523 435 aa2.93□□□□□ -1.94
HIR3YJR140C SPB4P25808 606 aaPredicted RBP2.92□□□□□ -1.94
HIR3YJR140C HOP09932 586 aa2.92□□□□□ -1.94
HIR3YJR140C SET1P38827 1080 aaKnown RBP2.91□□□□□ -1.94
HIR3YJR140C RTG3P38165 486 aa2.9□□□□□ -1.94
HIR3YJR140C UBP10P53874 792 aaPredicted RBP2.9□□□□□ -1.95
HIR3YJR140C MAK11P20484 414 aaKnown RBP2.9□□□□□ -1.95
HIR3YJR140C CST9Q06032 482 aa2.9□□□□□ -1.95
HIR3YJR140C MAK21Q12176 1025 aaKnown RBP2.9□□□□□ -1.95
HIR3YJR140C YNR021WP53723 404 aaKnown RBP2.88□□□□□ -1.95
HIR3YJR140C VPS70P47161 811 aa2.88□□□□□ -1.95
HIR3YJR140C EPS1P40557 701 aa2.87□□□□□ -1.95
HIR3YJR140C RLF2Q12495 606 aa2.87□□□□□ -1.95
HIR3YJR140C RAM2P29703 316 aa2.87□□□□□ -1.95
HIR3YJR140C BCH2P36122 765 aa2.87□□□□□ -1.95
HIR3YJR140C CDC27P38042 758 aa2.87□□□□□ -1.95
HIR3YJR140C DSF2P38213 736 aa2.86□□□□□ -1.95
HIR3YJR140C AIM7Q12156 149 aa2.86□□□□□ -1.95
HIR3YJR140C MRM1P25270 412 aa2.86□□□□□ -1.95
HIR3YJR140C REF2P42073 533 aaPredicted RBP2.85□□□□□ -1.95
HIR3YJR140C PBS2P08018 668 aa2.84□□□□□ -1.95
HIR3YJR140C YGL015CP33199 130 aa2.84□□□□□ -1.95
HIR3YJR140C MAM3Q12296 706 aa2.84□□□□□ -1.95
HIR3YJR140C YMR1P47147 688 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
HIR3YJR140C SLX5P32828 619 aaKnown RBP2.83□□□□□ -1.96
HIR3YJR140C BDF1P35817 686 aa2.83□□□□□ -1.96
HIR3YJR140C NSR1P27476 414 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
HIR3YJR140C TIF4632P39936 914 aaKnown RBP2.82□□□□□ -1.96
HIR3YJR140C DCD1P06773 312 aa2.81□□□□□ -1.96
HIR3YJR140C COQ8P27697 501 aa2.81□□□□□ -1.96
HIR3YJR140C SCY1P53009 804 aa2.81□□□□□ -1.96
HIR3YJR140C RPP1BP10622 106 aaKnown RBP2.8□□□□□ -1.96
HIR3YJR140C KIN1P13185 1064 aa2.8□□□□□ -1.96
HIR3YJR140C ABP1P15891 592 aaKnown RBP2.8□□□□□ -1.96
HIR3YJR140C ATF2P53296 535 aa2.8□□□□□ -1.96
HIR3YJR140C DMA2P53924 522 aa2.8□□□□□ -1.96
HIR3YJR140C KIC1P38692 1080 aa2.79□□□□□ -1.96
HIR3YJR140C SSA2P10592 639 aaKnown RBP2.79□□□□□ -1.96
HIR3YJR140C HPC2Q01448 625 aa2.79□□□□□ -1.96
HIR3YJR140C MIF2P35201 549 aa2.78□□□□□ -1.96
HIR3YJR140C COX6P00427 148 aa2.78□□□□□ -1.96
HIR3YJR140C IES2P40154 320 aa2.78□□□□□ -1.96
HIR3YJR140C YAP5P40574 245 aa2.78□□□□□ -1.97
HIR3YJR140C CLB5P30283 435 aa2.77□□□□□ -1.97
HIR3YJR140C VPS29P38759 282 aa2.77□□□□□ -1.97
HIR3YJR140C BRL1P38770 471 aa2.77□□□□□ -1.97
HIR3YJR140C YOR238WQ08634 303 aa2.76□□□□□ -1.97
HIR3YJR140C MAP2P38174 421 aaKnown RBP2.76□□□□□ -1.97
HIR3YJR140C ATH1P48016 1211 aa2.76□□□□□ -1.97
HIR3YJR140C TGL3P40308 642 aa2.75□□□□□ -1.97
HIR3YJR140C GRE2Q12068 342 aaKnown RBP2.75□□□□□ -1.97
HIR3YJR140C GUT1P32190 709 aa2.75□□□□□ -1.97
HIR3YJR140C PSE1P32337 1089 aaKnown RBP2.75□□□□□ -1.97
HIR3YJR140C DBP1P24784 617 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms