RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W DRS1P32892 752 aaKnown RBP4.56□□□□□ -1.68
SIR4YDR227W INO80P53115 1489 aa4.48□□□□□ -1.69
SIR4YDR227W MON2P48563 1636 aaPredicted RBP4.48□□□□□ -1.69
SIR4YDR227W RSE1Q04693 1361 aaKnown RBP4.44□□□□□ -1.7
SIR4YDR227W MIF2P35201 549 aa4.38□□□□□ -1.71
SIR4YDR227W RQC2Q12532 1038 aaKnown RBP4.37□□□□□ -1.71
SIR4YDR227W KOG1P38873 1557 aa4.35□□□□□ -1.71
SIR4YDR227W SWR1Q05471 1514 aa4.27□□□□□ -1.73
SIR4YDR227W MTC1P47018 478 aaKnown RBP4.27□□□□□ -1.73
SIR4YDR227W BFR2Q06631 534 aaKnown RBP4.27□□□□□ -1.73
SIR4YDR227W SPA2P23201 1466 aaKnown RBP4.18□□□□□ -1.74
SIR4YDR227W DNA2P38859 1522 aa4.1□□□□□ -1.75
SIR4YDR227W TAF7Q05021 590 aa4.09□□□□□ -1.76
SIR4YDR227W TCB3Q03640 1545 aaKnown RBP4.03□□□□□ -1.76
SIR4YDR227W TFA1P36100 482 aa3.98□□□□□ -1.77
SIR4YDR227W DMA1P38823 416 aa3.92□□□□□ -1.78
SIR4YDR227W YFR006WP43590 535 aa3.9□□□□□ -1.78
SIR4YDR227W LTE1P07866 1435 aa3.89□□□□□ -1.79
SIR4YDR227W FAP1P53971 965 aa3.88□□□□□ -1.79
SIR4YDR227W THO2P53552 1597 aaKnown RBP3.88□□□□□ -1.79
SIR4YDR227W SSK2P53599 1579 aa3.87□□□□□ -1.79
SIR4YDR227W DNF1P32660 1571 aa3.84□□□□□ -1.79
SIR4YDR227W REV3P14284 1504 aa3.82□□□□□ -1.8
SIR4YDR227W MET5P47169 1442 aa3.78□□□□□ -1.8
SIR4YDR227W SGS1P35187 1447 aa3.78□□□□□ -1.8
SIR4YDR227W MDS3P53094 1487 aa3.77□□□□□ -1.81
SIR4YDR227W GEA2P39993 1459 aaKnown RBP3.75□□□□□ -1.81
SIR4YDR227W ESC1Q03661 1658 aaKnown RBP3.75□□□□□ -1.81
SIR4YDR227W BUD4P47136 1447 aa3.75□□□□□ -1.81
SIR4YDR227W MYO2P19524 1574 aaKnown RBP3.74□□□□□ -1.81
SIR4YDR227W ABP1P15891 592 aaKnown RBP3.73□□□□□ -1.81
SIR4YDR227W TY1B-DR4Q07793 1604 aa3.73□□□□□ -1.81
SIR4YDR227W PTP3P40048 928 aa3.7□□□□□ -1.82
SIR4YDR227W HAA1Q12753 694 aaKnown RBP3.7□□□□□ -1.82
SIR4YDR227W IRC20Q06554 1556 aa3.69□□□□□ -1.82
SIR4YDR227W BPT1P14772 1559 aa3.67□□□□□ -1.82
SIR4YDR227W SPT6P23615 1451 aaKnown RBP3.67□□□□□ -1.82
SIR4YDR227W AAD16Q02895 342 aa3.67□□□□□ -1.82
SIR4YDR227W PEP1P32319 1579 aa3.66□□□□□ -1.82
SIR4YDR227W YCF1P39109 1515 aaKnown RBP3.63□□□□□ -1.83
SIR4YDR227W MMS1Q06211 1407 aa3.62□□□□□ -1.83
SIR4YDR227W DRS2P39524 1355 aa3.62□□□□□ -1.83
SIR4YDR227W PRY3P47033 881 aa3.61□□□□□ -1.83
SIR4YDR227W ISW2Q08773 1120 aa3.61□□□□□ -1.83
SIR4YDR227W EDE1P34216 1381 aa3.6□□□□□ -1.83
SIR4YDR227W ECM5Q03214 1411 aa3.6□□□□□ -1.83
SIR4YDR227W PRI1P10363 409 aa3.59□□□□□ -1.84
SIR4YDR227W YOR093CQ12275 1648 aa3.58□□□□□ -1.84
SIR4YDR227W RPA190P10964 1664 aaKnown RBP3.58□□□□□ -1.84
SIR4YDR227W DIP2Q12220 943 aaPredicted RBP3.58□□□□□ -1.84
SIR4YDR227W TRM3Q07527 1436 aa3.54□□□□□ -1.84
SIR4YDR227W DMA2P53924 522 aa3.53□□□□□ -1.84
SIR4YDR227W SIN3P22579 1536 aa3.53□□□□□ -1.84
SIR4YDR227W CDC25P04821 1589 aa3.52□□□□□ -1.85
SIR4YDR227W TAF2P23255 1407 aa3.5□□□□□ -1.85
SIR4YDR227W HIR3P47171 1648 aa3.5□□□□□ -1.85
SIR4YDR227W RKR1Q04781 1562 aa3.49□□□□□ -1.85
SIR4YDR227W URN1Q06525 465 aaKnown RBP3.49□□□□□ -1.85
SIR4YDR227W YTA7P40340 1379 aa3.49□□□□□ -1.85
SIR4YDR227W RPO31P04051 1460 aa3.48□□□□□ -1.85
SIR4YDR227W HSL1P34244 1518 aa3.48□□□□□ -1.85
SIR4YDR227W AIM44Q99299 758 aa3.44□□□□□ -1.86
SIR4YDR227W LEO1P38439 464 aa3.43□□□□□ -1.86
SIR4YDR227W TY1B-DR3Q99231 1755 aa3.43□□□□□ -1.86
SIR4YDR227W YMR196WQ04336 1088 aa3.41□□□□□ -1.86
SIR4YDR227W YGL015CP33199 130 aa3.4□□□□□ -1.86
SIR4YDR227W TRM732Q03496 1420 aa3.4□□□□□ -1.86
SIR4YDR227W NTE1Q04958 1679 aa3.4□□□□□ -1.86
SIR4YDR227W BNR1P40450 1375 aa3.4□□□□□ -1.87
SIR4YDR227W YPK9Q12697 1472 aa3.39□□□□□ -1.87
SIR4YDR227W ESP1Q03018 1630 aa3.39□□□□□ -1.87
SIR4YDR227W GTT3P39996 337 aa3.39□□□□□ -1.87
SIR4YDR227W BUD3P25558 1636 aa3.38□□□□□ -1.87
SIR4YDR227W DNF2Q12675 1612 aa3.38□□□□□ -1.87
SIR4YDR227W PDR15Q04182 1529 aaKnown RBP3.38□□□□□ -1.87
SIR4YDR227W MRPL32P25348 183 aa3.37□□□□□ -1.87
SIR4YDR227W YAH1Q12184 172 aaKnown RBP3.37□□□□□ -1.87
SIR4YDR227W TY2B-LR1P0C2J3 1770 aa3.37□□□□□ -1.87
SIR4YDR227W TY2B-FP0CX63 1770 aa3.37□□□□□ -1.87
SIR4YDR227W TY2B-GR2P0CX64 1770 aa3.37□□□□□ -1.87
SIR4YDR227W TY2B-CP25384 1770 aa3.37□□□□□ -1.87
SIR4YDR227W TY2B-DR2Q03494 1770 aa3.37□□□□□ -1.87
SIR4YDR227W TY1B-DR1Q03855 1755 aa3.37□□□□□ -1.87
SIR4YDR227W TY2B-DR3Q07791 1770 aaKnown RBP3.37□□□□□ -1.87
SIR4YDR227W TY2B-OR1Q12113 1770 aa3.37□□□□□ -1.87
SIR4YDR227W TY2B-DR1Q12472 1770 aa3.37□□□□□ -1.87
SIR4YDR227W TY2B-OR2Q12501 1770 aa3.37□□□□□ -1.87
SIR4YDR227W AVT3P36062 692 aa3.37□□□□□ -1.87
SIR4YDR227W TOP2P06786 1428 aaKnown RBP3.36□□□□□ -1.87
SIR4YDR227W UBP1P25037 809 aa3.35□□□□□ -1.87
SIR4YDR227W TY1B-BRQ12193 1756 aa3.35□□□□□ -1.87
SIR4YDR227W TY1B-GR3Q12316 1755 aa3.35□□□□□ -1.87
SIR4YDR227W TY1B-ORQ92393 1755 aa3.35□□□□□ -1.87
SIR4YDR227W VPS15P22219 1454 aa3.35□□□□□ -1.87
SIR4YDR227W NUP170P38181 1502 aa3.34□□□□□ -1.87
SIR4YDR227W SPB4P25808 606 aaPredicted RBP3.34□□□□□ -1.87
SIR4YDR227W TY2B-BQ12491 1770 aa3.34□□□□□ -1.87
SIR4YDR227W IOC4Q04213 475 aa3.34□□□□□ -1.88
SIR4YDR227W TY1B-HO13535 1793 aa3.34□□□□□ -1.88
SIR4YDR227W TY1B-DR5P0C2I2 1755 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms