RNA–Protein interactions for RNA: YLR388W

RPS29A, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS29A, Length 171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS29A	YLR388W	FAP1	P53971	965 aa		5.42	□□□□□ -1.54
RPS29A	YLR388W	MTC1	P47018	478 aa	Known RBP	5.3	□□□□□ -1.56
RPS29A	YLR388W	PRY3	P47033	881 aa		5.12	□□□□□ -1.59
RPS29A	YLR388W	AAD16	Q02895	342 aa		4.84	□□□□□ -1.63
RPS29A	YLR388W	PRI1	P10363	409 aa		4.79	□□□□□ -1.64
RPS29A	YLR388W	YCK3	P39962	524 aa		4.79	□□□□□ -1.64
RPS29A	YLR388W	HAA1	Q12753	694 aa	Known RBP	4.77	□□□□□ -1.65
RPS29A	YLR388W	DRS1	P32892	752 aa	Known RBP	4.75	□□□□□ -1.65
RPS29A	YLR388W	ISW2	Q08773	1120 aa		4.53	□□□□□ -1.68
RPS29A	YLR388W	TFA1	P36100	482 aa		4.52	□□□□□ -1.69
RPS29A	YLR388W	RPG1	P38249	964 aa	Known RBP	4.5	□□□□□ -1.69
RPS29A	YLR388W	TSR3	Q12094	313 aa	Known RBP	4.5	□□□□□ -1.69
RPS29A	YLR388W	RQC2	Q12532	1038 aa	Known RBP	4.48	□□□□□ -1.69
RPS29A	YLR388W	TAF7	Q05021	590 aa		4.41	□□□□□ -1.7
RPS29A	YLR388W	BFR2	Q06631	534 aa	Known RBP	4.39	□□□□□ -1.71
RPS29A	YLR388W	MRPL32	P25348	183 aa		4.33	□□□□□ -1.72
RPS29A	YLR388W	YGL015C	P33199	130 aa		4.32	□□□□□ -1.72
RPS29A	YLR388W	BUD31	P25337	157 aa	Predicted RBP	4.2	□□□□□ -1.74
RPS29A	YLR388W	RSE1	Q04693	1361 aa	Known RBP	4.09	□□□□□ -1.75
RPS29A	YLR388W	DIP2	Q12220	943 aa	Predicted RBP	4.06	□□□□□ -1.76
RPS29A	YLR388W	REB1	P21538	810 aa		4.02	□□□□□ -1.77
RPS29A	YLR388W	DMA1	P38823	416 aa		4.02	□□□□□ -1.77
RPS29A	YLR388W	CDC27	P38042	758 aa		4.01	□□□□□ -1.77
RPS29A	YLR388W	RPL17A	P05740	184 aa	Known RBP	3.99	□□□□□ -1.77
RPS29A	YLR388W	RPL17B	P46990	184 aa	Known RBP	3.99	□□□□□ -1.77
RPS29A	YLR388W	SIS1	P25294	352 aa	Known RBP	3.96	□□□□□ -1.78
RPS29A	YLR388W	UBP10	P53874	792 aa	Predicted RBP	3.96	□□□□□ -1.78
RPS29A	YLR388W	MAP2	P38174	421 aa	Known RBP	3.94	□□□□□ -1.78
RPS29A	YLR388W	LEO1	P38439	464 aa		3.94	□□□□□ -1.78
RPS29A	YLR388W	AVT3	P36062	692 aa		3.91	□□□□□ -1.78
RPS29A	YLR388W	UBP9	P39967	754 aa		3.88	□□□□□ -1.79
RPS29A	YLR388W	YKR023W	P36119	530 aa	Known RBP	3.86	□□□□□ -1.79
RPS29A	YLR388W	TIF4632	P39936	914 aa	Known RBP	3.83	□□□□□ -1.8
RPS29A	YLR388W	TGL3	P40308	642 aa		3.82	□□□□□ -1.8
RPS29A	YLR388W	HO	P09932	586 aa		3.78	□□□□□ -1.8
RPS29A	YLR388W	TFC8	Q12308	588 aa		3.78	□□□□□ -1.8
RPS29A	YLR388W	DCD1	P06773	312 aa		3.77	□□□□□ -1.81
RPS29A	YLR388W	SCY1	P53009	804 aa		3.77	□□□□□ -1.81
RPS29A	YLR388W	SPT21	P35209	758 aa		3.76	□□□□□ -1.81
RPS29A	YLR388W	SLX5	P32828	619 aa	Known RBP	3.75	□□□□□ -1.81
RPS29A	YLR388W	URN1	Q06525	465 aa	Known RBP	3.75	□□□□□ -1.81
RPS29A	YLR388W	NAP1	P25293	417 aa	Known RBP	3.69	□□□□□ -1.82
RPS29A	YLR388W	IOC4	Q04213	475 aa		3.69	□□□□□ -1.82
RPS29A	YLR388W	AIM44	Q99299	758 aa		3.68	□□□□□ -1.82
RPS29A	YLR388W	DMA2	P53924	522 aa		3.66	□□□□□ -1.82
RPS29A	YLR388W	LEU3	P08638	886 aa		3.65	□□□□□ -1.83
RPS29A	YLR388W	BCH2	P36122	765 aa		3.64	□□□□□ -1.83
RPS29A	YLR388W	IFH1	P39520	1085 aa		3.64	□□□□□ -1.83
RPS29A	YLR388W	PTP3	P40048	928 aa		3.61	□□□□□ -1.83
RPS29A	YLR388W	YBL029C-A	Q3E756	94 aa		3.61	□□□□□ -1.83
RPS29A	YLR388W	ABP1	P15891	592 aa	Known RBP	3.6	□□□□□ -1.83
RPS29A	YLR388W	MST1	P07236	462 aa		3.59	□□□□□ -1.83
RPS29A	YLR388W	RLF2	Q12495	606 aa		3.57	□□□□□ -1.84
RPS29A	YLR388W	VNX1	P42839	908 aa		3.55	□□□□□ -1.84
RPS29A	YLR388W	ORC1	P54784	914 aa	Predicted RBP	3.54	□□□□□ -1.84
RPS29A	YLR388W	YOR238W	Q08634	303 aa		3.54	□□□□□ -1.84
RPS29A	YLR388W	YJL171C	P46992	396 aa		3.52	□□□□□ -1.85
RPS29A	YLR388W	YRB30	P53107	440 aa	Predicted RBP	3.52	□□□□□ -1.85
RPS29A	YLR388W	SPP1	Q03012	353 aa		3.52	□□□□□ -1.85
RPS29A	YLR388W	SAS10	Q12136	610 aa	Predicted RBP	3.52	□□□□□ -1.85
RPS29A	YLR388W	RIM101	P33400	625 aa		3.51	□□□□□ -1.85
RPS29A	YLR388W	BDF1	P35817	686 aa		3.5	□□□□□ -1.85
RPS29A	YLR388W	RPN1	P38764	993 aa	Known RBP	3.5	□□□□□ -1.85
RPS29A	YLR388W	EPS1	P40557	701 aa		3.5	□□□□□ -1.85
RPS29A	YLR388W	AIR2	Q12476	344 aa	Known RBP	3.5	□□□□□ -1.85
RPS29A	YLR388W	WSC3	Q12215	556 aa		3.48	□□□□□ -1.85
RPS29A	YLR388W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	RIP-Chip
RPS29A	YLR388W	FKH1	P40466	484 aa		3.47	□□□□□ -1.85
RPS29A	YLR388W	SNU71	P53207	620 aa	Known RBP	3.46	□□□□□ -1.86
RPS29A	YLR388W	TOP1	P04786	769 aa		3.45	□□□□□ -1.86
RPS29A	YLR388W	YAP5	P40574	245 aa		3.45	□□□□□ -1.86
RPS29A	YLR388W	TIF11	P38912	153 aa	Known RBP	3.44	□□□□□ -1.86
RPS29A	YLR388W	YML020W	Q03722	664 aa		3.44	□□□□□ -1.86
RPS29A	YLR388W	BMT6	Q12291	365 aa		3.42	□□□□□ -1.86
RPS29A	YLR388W	CKB1	P43639	278 aa		3.41	□□□□□ -1.86
RPS29A	YLR388W	BRL1	P38770	471 aa		3.4	□□□□□ -1.87
RPS29A	YLR388W	SSP1	P38871	571 aa		3.4	□□□□□ -1.87
RPS29A	YLR388W	OXP1	P28273	1286 aa		3.39	□□□□□ -1.87
RPS29A	YLR388W	LDB19	Q12502	818 aa		3.39	□□□□□ -1.87
RPS29A	YLR388W	GTT3	P39996	337 aa		3.38	□□□□□ -1.87
RPS29A	YLR388W	SLX8	P40072	274 aa		3.37	□□□□□ -1.87
RPS29A	YLR388W	ULI1	P43604	169 aa		3.37	□□□□□ -1.87
RPS29A	YLR388W	NOP7	P53261	605 aa	Known RBP	3.37	□□□□□ -1.87
RPS29A	YLR388W	NOP8	Q08287	484 aa	Predicted RBP	3.37	□□□□□ -1.87
RPS29A	YLR388W	SPB4	P25808	606 aa	Predicted RBP	3.36	□□□□□ -1.87
RPS29A	YLR388W	BBC1	P47068	1157 aa		3.36	□□□□□ -1.87
RPS29A	YLR388W	IOC2	Q12072	812 aa		3.36	□□□□□ -1.87
RPS29A	YLR388W	YIL055C	P40523	627 aa	Known RBP	3.35	□□□□□ -1.87
RPS29A	YLR388W	NUG1	P40010	520 aa	Known RBP	3.34	□□□□□ -1.87
RPS29A	YLR388W	SWE1	P32944	819 aa		3.31	□□□□□ -1.88
RPS29A	YLR388W	SIS2	P36024	562 aa		3.31	□□□□□ -1.88
RPS29A	YLR388W	MET10	P39692	1035 aa		3.31	□□□□□ -1.88
RPS29A	YLR388W	YFR016C	P43597	1233 aa	Known RBP	3.31	□□□□□ -1.88
RPS29A	YLR388W	MDG1	P53885	366 aa		3.31	□□□□□ -1.88
RPS29A	YLR388W	AI2	P03876	854 aa		3.3	□□□□□ -1.88
RPS29A	YLR388W	BRN1	P38170	754 aa		3.3	□□□□□ -1.88
RPS29A	YLR388W	KRI1	P42846	591 aa	Known RBP	3.3	□□□□□ -1.88
RPS29A	YLR388W	ATG36	P46983	293 aa		3.3	□□□□□ -1.88
RPS29A	YLR388W	RTS3	P53289	263 aa		3.3	□□□□□ -1.88
RPS29A	YLR388W	SUB1	P54000	292 aa	Known RBP	3.3	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms