RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR9	YOL145C	DRS1	P32892	752 aa	Known RBP	5.05	□□□□□ -1.6
CTR9	YOL145C	MTC1	P47018	478 aa	Known RBP	4.8	□□□□□ -1.64
CTR9	YOL145C	BFR2	Q06631	534 aa	Known RBP	4.45	□□□□□ -1.7
CTR9	YOL145C	TFA1	P36100	482 aa		4.34	□□□□□ -1.72
CTR9	YOL145C	AVT3	P36062	692 aa		4.23	□□□□□ -1.73
CTR9	YOL145C	DIP2	Q12220	943 aa	Predicted RBP	4.21	□□□□□ -1.73
CTR9	YOL145C	RSE1	Q04693	1361 aa	Known RBP	3.89	□□□□□ -1.79
CTR9	YOL145C	RPG1	P38249	964 aa	Known RBP	3.8	□□□□□ -1.8
CTR9	YOL145C	ISW2	Q08773	1120 aa		3.8	□□□□□ -1.8
CTR9	YOL145C	RQC2	Q12532	1038 aa	Known RBP	3.77	□□□□□ -1.81
CTR9	YOL145C	RPL17A	P05740	184 aa	Known RBP	3.76	□□□□□ -1.81
CTR9	YOL145C	RPL17B	P46990	184 aa	Known RBP	3.76	□□□□□ -1.81
CTR9	YOL145C	PRI1	P10363	409 aa		3.72	□□□□□ -1.81
CTR9	YOL145C	FAP1	P53971	965 aa		3.7	□□□□□ -1.82
CTR9	YOL145C	DMA1	P38823	416 aa		3.69	□□□□□ -1.82
CTR9	YOL145C	PTP3	P40048	928 aa		3.68	□□□□□ -1.82
CTR9	YOL145C	SPT21	P35209	758 aa		3.66	□□□□□ -1.82
CTR9	YOL145C	REB1	P21538	810 aa		3.66	□□□□□ -1.82
CTR9	YOL145C	RIM101	P33400	625 aa		3.64	□□□□□ -1.83
CTR9	YOL145C	AAD16	Q02895	342 aa		3.62	□□□□□ -1.83
CTR9	YOL145C	TSR3	Q12094	313 aa	Known RBP	3.59	□□□□□ -1.84
CTR9	YOL145C	OXP1	P28273	1286 aa		3.57	□□□□□ -1.84
CTR9	YOL145C	SSP1	P38871	571 aa		3.57	□□□□□ -1.84
CTR9	YOL145C	YAH1	Q12184	172 aa	Known RBP	3.54	□□□□□ -1.84
CTR9	YOL145C	YKR023W	P36119	530 aa	Known RBP	3.5	□□□□□ -1.85
CTR9	YOL145C	YLR271W	Q06152	274 aa		3.5	□□□□□ -1.85
CTR9	YOL145C	TAF7	Q05021	590 aa		3.45	□□□□□ -1.86
CTR9	YOL145C	HO	P09932	586 aa		3.44	□□□□□ -1.86
CTR9	YOL145C	YIL055C	P40523	627 aa	Known RBP	3.44	□□□□□ -1.86
CTR9	YOL145C	PRY3	P47033	881 aa		3.44	□□□□□ -1.86
CTR9	YOL145C	DCD1	P06773	312 aa		3.44	□□□□□ -1.86
CTR9	YOL145C	CST9	Q06032	482 aa		3.43	□□□□□ -1.86
CTR9	YOL145C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.43	□□□□□ -1.86	not detected
CTR9	YOL145C	TFC8	Q12308	588 aa		3.42	□□□□□ -1.86
CTR9	YOL145C	RSM7	P47150	247 aa		3.41	□□□□□ -1.86
CTR9	YOL145C	MGA2	P40578	1113 aa		3.4	□□□□□ -1.87
CTR9	YOL145C	CDC27	P38042	758 aa		3.39	□□□□□ -1.87
CTR9	YOL145C	LEO1	P38439	464 aa		3.38	□□□□□ -1.87
CTR9	YOL145C	SAS10	Q12136	610 aa	Predicted RBP	3.38	□□□□□ -1.87
CTR9	YOL145C	MRPL32	P25348	183 aa		3.38	□□□□□ -1.87
CTR9	YOL145C	PSD2	P53037	1138 aa	Known RBP	3.37	□□□□□ -1.87
CTR9	YOL145C	YCK3	P39962	524 aa		3.36	□□□□□ -1.87
CTR9	YOL145C	AI2	P03876	854 aa		3.34	□□□□□ -1.87
CTR9	YOL145C	BCH2	P36122	765 aa		3.34	□□□□□ -1.87
CTR9	YOL145C	LEU3	P08638	886 aa		3.32	□□□□□ -1.88
CTR9	YOL145C	RAM2	P29703	316 aa		3.31	□□□□□ -1.88
CTR9	YOL145C	RCR1	P38212	213 aa		3.31	□□□□□ -1.88
CTR9	YOL145C	MRM1	P25270	412 aa		3.27	□□□□□ -1.89
CTR9	YOL145C	EPS1	P40557	701 aa		3.27	□□□□□ -1.89
CTR9	YOL145C	BDF1	P35817	686 aa		3.26	□□□□□ -1.89
CTR9	YOL145C	BBC1	P47068	1157 aa		3.25	□□□□□ -1.89
CTR9	YOL145C	SET1	P38827	1080 aa	Known RBP	3.25	□□□□□ -1.89
CTR9	YOL145C	DMA2	P53924	522 aa		3.24	□□□□□ -1.89
CTR9	YOL145C	VPS70	P47161	811 aa		3.23	□□□□□ -1.89
CTR9	YOL145C	SCY1	P53009	804 aa		3.23	□□□□□ -1.89
CTR9	YOL145C	ABP1	P15891	592 aa	Known RBP	3.22	□□□□□ -1.89
CTR9	YOL145C	YPR148C	Q06523	435 aa		3.21	□□□□□ -1.89
CTR9	YOL145C	HAA1	Q12753	694 aa	Known RBP	3.21	□□□□□ -1.9
CTR9	YOL145C	RPN1	P38764	993 aa	Known RBP	3.2	□□□□□ -1.9
CTR9	YOL145C	SPB4	P25808	606 aa	Predicted RBP	3.2	□□□□□ -1.9
CTR9	YOL145C	MAP2	P38174	421 aa	Known RBP	3.2	□□□□□ -1.9
CTR9	YOL145C	VPS29	P38759	282 aa		3.2	□□□□□ -1.9
CTR9	YOL145C	RTG3	P38165	486 aa		3.19	□□□□□ -1.9
CTR9	YOL145C	MAK11	P20484	414 aa	Known RBP	3.18	□□□□□ -1.9
CTR9	YOL145C	COQ8	P27697	501 aa		3.17	□□□□□ -1.9
CTR9	YOL145C	CKB1	P43639	278 aa		3.17	□□□□□ -1.9
CTR9	YOL145C	EDS1	P38073	919 aa		3.16	□□□□□ -1.9
CTR9	YOL145C	STS1	P38637	319 aa		3.15	□□□□□ -1.9
CTR9	YOL145C	DSF2	P38213	736 aa		3.15	□□□□□ -1.91
CTR9	YOL145C	PBS2	P08018	668 aa		3.14	□□□□□ -1.91
CTR9	YOL145C	YFR006W	P43590	535 aa		3.14	□□□□□ -1.91
CTR9	YOL145C	IFH1	P39520	1085 aa		3.13	□□□□□ -1.91
CTR9	YOL145C	MIF2	P35201	549 aa		3.13	□□□□□ -1.91
CTR9	YOL145C	UBP10	P53874	792 aa	Predicted RBP	3.13	□□□□□ -1.91
CTR9	YOL145C	GLC3	P32775	704 aa		3.12	□□□□□ -1.91
CTR9	YOL145C	DIT2	P21595	489 aa		3.12	□□□□□ -1.91
CTR9	YOL145C	DBP1	P24784	617 aa	Known RBP	3.12	□□□□□ -1.91
CTR9	YOL145C	KIN1	P13185	1064 aa		3.11	□□□□□ -1.91
CTR9	YOL145C	SLX5	P32828	619 aa	Known RBP	3.11	□□□□□ -1.91
CTR9	YOL145C	IES2	P40154	320 aa		3.1	□□□□□ -1.91
CTR9	YOL145C	NUP42	P49686	430 aa	Known RBP	3.1	□□□□□ -1.91
CTR9	YOL145C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
CTR9	YOL145C	YNR021W	P53723	404 aa	Known RBP	3.09	□□□□□ -1.91
CTR9	YOL145C	PIB1	Q06651	286 aa		3.09	□□□□□ -1.91
CTR9	YOL145C	REF2	P42073	533 aa	Predicted RBP	3.09	□□□□□ -1.92
CTR9	YOL145C	PTC3	P34221	468 aa	Known RBP	3.08	□□□□□ -1.92
CTR9	YOL145C	MAM3	Q12296	706 aa		3.08	□□□□□ -1.92
CTR9	YOL145C	YOR238W	Q08634	303 aa		3.08	□□□□□ -1.92
CTR9	YOL145C	GUA1	P38625	525 aa	Known RBP	3.07	□□□□□ -1.92
CTR9	YOL145C	RLF2	Q12495	606 aa		3.06	□□□□□ -1.92
CTR9	YOL145C	YGL015C	P33199	130 aa		3.06	□□□□□ -1.92
CTR9	YOL145C	NOP53	Q12080	455 aa	Known RBP	3.06	□□□□□ -1.92
CTR9	YOL145C	AIM7	Q12156	149 aa		3.05	□□□□□ -1.92
CTR9	YOL145C	UBP14	P38237	781 aa	Known RBP	3.05	□□□□□ -1.92
CTR9	YOL145C	VHR2	P40041	505 aa		3.05	□□□□□ -1.92
CTR9	YOL145C	YDR090C	Q03193	310 aa		3.05	□□□□□ -1.92
CTR9	YOL145C	COX6	P00427	148 aa		3.04	□□□□□ -1.92
CTR9	YOL145C	VMA1	P17255	1071 aa	Known RBP	3.03	□□□□□ -1.92
CTR9	YOL145C	YLR326W	Q06170	240 aa	Known RBP	3.03	□□□□□ -1.92
CTR9	YOL145C	SOL3	P38858	249 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms