RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C FAP1P53971 965 aa5.54□□□□□ -1.52
TRL1YJL087C PRY3P47033 881 aa5.3□□□□□ -1.56
TRL1YJL087C HAA1Q12753 694 aaKnown RBP4.9□□□□□ -1.63
TRL1YJL087C BUD31P25337 157 aaPredicted RBP4.82□□□□□ -1.64
TRL1YJL087C YCK3P39962 524 aa4.78□□□□□ -1.64
TRL1YJL087C DRS1P32892 752 aaKnown RBP4.77□□□□□ -1.65
TRL1YJL087C MTC1P47018 478 aaKnown RBP4.71□□□□□ -1.65
TRL1YJL087C SIS1P25294 352 aaKnown RBP4.4□□□□□ -1.71
TRL1YJL087C TFA1P36100 482 aa4.36□□□□□ -1.71
TRL1YJL087C BFR2Q06631 534 aaKnown RBP4.28□□□□□ -1.72
TRL1YJL087C AAD16Q02895 342 aa4.26□□□□□ -1.73
TRL1YJL087C YGL015CP33199 130 aa4.09□□□□□ -1.75
TRL1YJL087C AVT3P36062 692 aa4.03□□□□□ -1.76
TRL1YJL087C RQC2Q12532 1038 aaKnown RBP4.03□□□□□ -1.76
TRL1YJL087C RGA2Q06407 1009 aa4.02□□□□□ -1.77
TRL1YJL087C DIP2Q12220 943 aaPredicted RBP3.99□□□□□ -1.77
TRL1YJL087C ISW2Q08773 1120 aa3.98□□□□□ -1.77
TRL1YJL087C PRI1P10363 409 aa3.92□□□□□ -1.78
TRL1YJL087C RSE1Q04693 1361 aaKnown RBP3.86□□□□□ -1.79
TRL1YJL087C RPG1P38249 964 aaKnown RBP3.84□□□□□ -1.8
TRL1YJL087C TAF7Q05021 590 aa3.84□□□□□ -1.8
TRL1YJL087C UBP9P39967 754 aa3.8□□□□□ -1.8
TRL1YJL087C REB1P21538 810 aa3.73□□□□□ -1.81
TRL1YJL087C DMA1P38823 416 aa3.73□□□□□ -1.81
TRL1YJL087C RPL17AP05740 184 aaKnown RBP3.69□□□□□ -1.82
TRL1YJL087C RPL17BP46990 184 aaKnown RBP3.69□□□□□ -1.82
TRL1YJL087C LEO1P38439 464 aa3.65□□□□□ -1.83
TRL1YJL087C TSR3Q12094 313 aaKnown RBP3.65□□□□□ -1.83
TRL1YJL087C MRPL32P25348 183 aa3.63□□□□□ -1.83
TRL1YJL087C PTP3P40048 928 aa3.5□□□□□ -1.85
TRL1YJL087C LEU3P08638 886 aa3.45□□□□□ -1.86
TRL1YJL087C SAS10Q12136 610 aaPredicted RBP3.45□□□□□ -1.86
TRL1YJL087C RIM101P33400 625 aa3.43□□□□□ -1.86
TRL1YJL087C SSP1P38871 571 aa3.43□□□□□ -1.86
TRL1YJL087C SPT21P35209 758 aa3.41□□□□□ -1.86
TRL1YJL087C RGA1P39083 1007 aa3.41□□□□□ -1.86
TRL1YJL087C YIL055CP40523 627 aaKnown RBP3.41□□□□□ -1.86
TRL1YJL087C DMA2P53924 522 aa3.35□□□□□ -1.87
TRL1YJL087C OXP1P28273 1286 aa3.34□□□□□ -1.87
TRL1YJL087C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
TRL1YJL087C YKR023WP36119 530 aaKnown RBP3.32□□□□□ -1.88
TRL1YJL087C RPN1P38764 993 aaKnown RBP3.32□□□□□ -1.88
TRL1YJL087C HOP09932 586 aa3.32□□□□□ -1.88
TRL1YJL087C ABP1P15891 592 aaKnown RBP3.32□□□□□ -1.88
TRL1YJL087C UBP10P53874 792 aaPredicted RBP3.31□□□□□ -1.88
TRL1YJL087C YLR271WQ06152 274 aa3.31□□□□□ -1.88
TRL1YJL087C TFC8Q12308 588 aa3.31□□□□□ -1.88
TRL1YJL087C BBC1P47068 1157 aa3.3□□□□□ -1.88
TRL1YJL087C YAH1Q12184 172 aaKnown RBP3.3□□□□□ -1.88
TRL1YJL087C CDC27P38042 758 aa3.29□□□□□ -1.88
TRL1YJL087C TIF4632P39936 914 aaKnown RBP3.27□□□□□ -1.89
TRL1YJL087C MGA2P40578 1113 aa3.27□□□□□ -1.89
TRL1YJL087C RLF2Q12495 606 aa3.27□□□□□ -1.89
TRL1YJL087C RSM7P47150 247 aa3.26□□□□□ -1.89
TRL1YJL087C DCD1P06773 312 aa3.24□□□□□ -1.89
TRL1YJL087C SLX5P32828 619 aaKnown RBP3.24□□□□□ -1.89
TRL1YJL087C YJL171CP46992 396 aa3.24□□□□□ -1.89
TRL1YJL087C SCY1P53009 804 aa3.24□□□□□ -1.89
TRL1YJL087C CKB1P43639 278 aa3.24□□□□□ -1.89
TRL1YJL087C CST9Q06032 482 aa3.22□□□□□ -1.89
TRL1YJL087C MAP2P38174 421 aaKnown RBP3.22□□□□□ -1.89
TRL1YJL087C IFH1P39520 1085 aa3.2□□□□□ -1.9
TRL1YJL087C SPB4P25808 606 aaPredicted RBP3.2□□□□□ -1.9
TRL1YJL087C BCH2P36122 765 aa3.19□□□□□ -1.9
TRL1YJL087C YPR148CQ06523 435 aa3.19□□□□□ -1.9
TRL1YJL087C AI2P03876 854 aa3.18□□□□□ -1.9
TRL1YJL087C SET1P38827 1080 aaKnown RBP3.17□□□□□ -1.9
TRL1YJL087C EPS1P40557 701 aa3.17□□□□□ -1.9
TRL1YJL087C PSD2P53037 1138 aaKnown RBP3.17□□□□□ -1.9
TRL1YJL087C RAM2P29703 316 aa3.16□□□□□ -1.9
TRL1YJL087C VPS70P47161 811 aa3.16□□□□□ -1.9
TRL1YJL087C DSF2P38213 736 aa3.15□□□□□ -1.9
TRL1YJL087C TGL3P40308 642 aa3.15□□□□□ -1.91
TRL1YJL087C KIN1P13185 1064 aa3.14□□□□□ -1.91
TRL1YJL087C BDF1P35817 686 aa3.12□□□□□ -1.91
TRL1YJL087C YNR021WP53723 404 aaKnown RBP3.12□□□□□ -1.91
TRL1YJL087C GTT3P39996 337 aa3.12□□□□□ -1.91
TRL1YJL087C PBS2P08018 668 aa3.11□□□□□ -1.91
TRL1YJL087C AIM7Q12156 149 aa3.1□□□□□ -1.91
TRL1YJL087C GUA1P38625 525 aaKnown RBP3.1□□□□□ -1.91
TRL1YJL087C YAP5P40574 245 aa3.1□□□□□ -1.91
TRL1YJL087C NOP8Q08287 484 aaPredicted RBP3.1□□□□□ -1.91
TRL1YJL087C YOR238WQ08634 303 aa3.09□□□□□ -1.91
TRL1YJL087C MRM1P25270 412 aa3.09□□□□□ -1.92
TRL1YJL087C HGH1P48362 394 aaKnown RBP3.09□□□□□ -1.92
TRL1YJL087C ORC1P54784 914 aaPredicted RBP3.09□□□□□ -1.92
TRL1YJL087C YML020WQ03722 664 aa3.09□□□□□ -1.92
TRL1YJL087C RCR1P38212 213 aa3.08□□□□□ -1.92
TRL1YJL087C AIM44Q99299 758 aa3.08□□□□□ -1.92
TRL1YJL087C GLC3P32775 704 aa3.08□□□□□ -1.92
TRL1YJL087C RTG3P38165 486 aa3.08□□□□□ -1.92
TRL1YJL087C NUP42P49686 430 aaKnown RBP3.08□□□□□ -1.92
TRL1YJL087C DIT2P21595 489 aa3.07□□□□□ -1.92
TRL1YJL087C NAP1P25293 417 aaKnown RBP3.07□□□□□ -1.92
TRL1YJL087C MAK11P20484 414 aaKnown RBP3.06□□□□□ -1.92
TRL1YJL087C SLX8P40072 274 aa3.06□□□□□ -1.92
TRL1YJL087C NSR1P27476 414 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
TRL1YJL087C HPC2Q01448 625 aa3.05□□□□□ -1.92
TRL1YJL087C SUB2Q07478 446 aaKnown RBP3.04□□□□□ -1.92
TRL1YJL087C MAM3Q12296 706 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms