RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C DRS1P32892 752 aaKnown RBP4□□□□□ -1.77
UBP2YOR124C FAP1P53971 965 aa3.87□□□□□ -1.79
UBP2YOR124C MTC1P47018 478 aaKnown RBP3.81□□□□□ -1.8
UBP2YOR124C SPA2P23201 1466 aaKnown RBP3.71□□□□□ -1.82
UBP2YOR124C SKI3P17883 1432 aaKnown RBP3.53□□□□□ -1.84
UBP2YOR124C INO80P53115 1489 aa3.52□□□□□ -1.85
UBP2YOR124C PRY3P47033 881 aa3.5□□□□□ -1.85
UBP2YOR124C BFR2Q06631 534 aaKnown RBP3.5□□□□□ -1.85
UBP2YOR124C SSN2P38931 1420 aa3.5□□□□□ -1.85
UBP2YOR124C CHD1P32657 1468 aa3.47□□□□□ -1.85
UBP2YOR124C SGS1P35187 1447 aa3.45□□□□□ -1.86
UBP2YOR124C TY1B-DR4Q07793 1604 aa3.39□□□□□ -1.87
UBP2YOR124C NUP170P38181 1502 aa3.33□□□□□ -1.88
UBP2YOR124C SIN3P22579 1536 aa3.32□□□□□ -1.88
UBP2YOR124C TCB3Q03640 1545 aaKnown RBP3.32□□□□□ -1.88
UBP2YOR124C XRN1P22147 1528 aaKnown RBP3.31□□□□□ -1.88
UBP2YOR124C DIP2Q12220 943 aaPredicted RBP3.28□□□□□ -1.88
UBP2YOR124C UFD4P33202 1483 aa3.27□□□□□ -1.89
UBP2YOR124C THO2P53552 1597 aaKnown RBP3.26□□□□□ -1.89
UBP2YOR124C MMS22Q06164 1454 aa3.26□□□□□ -1.89
UBP2YOR124C MON2P48563 1636 aaPredicted RBP3.25□□□□□ -1.89
UBP2YOR124C SSK2P53599 1579 aa3.24□□□□□ -1.89
UBP2YOR124C PRI1P10363 409 aa3.24□□□□□ -1.89
UBP2YOR124C HSL1P34244 1518 aa3.23□□□□□ -1.89
UBP2YOR124C MLP2P40457 1679 aa3.2□□□□□ -1.9
UBP2YOR124C AAD16Q02895 342 aa3.2□□□□□ -1.9
UBP2YOR124C SPT6P23615 1451 aaKnown RBP3.2□□□□□ -1.9
UBP2YOR124C HIR3P47171 1648 aa3.19□□□□□ -1.9
UBP2YOR124C PEP1P32319 1579 aa3.19□□□□□ -1.9
UBP2YOR124C ESP1Q03018 1630 aa3.19□□□□□ -1.9
UBP2YOR124C MYO2P19524 1574 aaKnown RBP3.18□□□□□ -1.9
UBP2YOR124C STU1P38198 1513 aa3.18□□□□□ -1.9
UBP2YOR124C ECM5Q03214 1411 aa3.17□□□□□ -1.9
UBP2YOR124C POL1P13382 1468 aa3.16□□□□□ -1.9
UBP2YOR124C REV3P14284 1504 aa3.15□□□□□ -1.9
UBP2YOR124C ESC1Q03661 1658 aaKnown RBP3.15□□□□□ -1.91
UBP2YOR124C TFA1P36100 482 aa3.15□□□□□ -1.91
UBP2YOR124C AVT3P36062 692 aa3.14□□□□□ -1.91
UBP2YOR124C ISW2Q08773 1120 aa3.14□□□□□ -1.91
UBP2YOR124C SPP41P38904 1435 aa3.14□□□□□ -1.91
UBP2YOR124C RQC2Q12532 1038 aaKnown RBP3.14□□□□□ -1.91
UBP2YOR124C PDR10P51533 1564 aa3.13□□□□□ -1.91
UBP2YOR124C IRC20Q06554 1556 aa3.13□□□□□ -1.91
UBP2YOR124C PDR5P33302 1511 aaKnown RBP3.13□□□□□ -1.91
UBP2YOR124C MYO4P32492 1471 aa3.12□□□□□ -1.91
UBP2YOR124C YCK3P39962 524 aa3.12□□□□□ -1.91
UBP2YOR124C TY1B-DR3Q99231 1755 aa3.11□□□□□ -1.91
UBP2YOR124C TRM732Q03496 1420 aa3.11□□□□□ -1.91
UBP2YOR124C RPG1P38249 964 aaKnown RBP3.1□□□□□ -1.91
UBP2YOR124C YPK9Q12697 1472 aa3.09□□□□□ -1.91
UBP2YOR124C ATG2P53855 1592 aa3.09□□□□□ -1.92
UBP2YOR124C STH1P32597 1359 aa3.08□□□□□ -1.92
UBP2YOR124C NOP2P40991 618 aaKnown RBP3.08□□□□□ -1.92
UBP2YOR124C TY2B-LR1P0C2J3 1770 aa3.08□□□□□ -1.92
UBP2YOR124C TY2B-FP0CX63 1770 aa3.08□□□□□ -1.92
UBP2YOR124C TY2B-GR2P0CX64 1770 aa3.08□□□□□ -1.92
UBP2YOR124C TY2B-CP25384 1770 aa3.08□□□□□ -1.92
UBP2YOR124C TY2B-DR2Q03494 1770 aa3.08□□□□□ -1.92
UBP2YOR124C TY1B-DR1Q03855 1755 aa3.08□□□□□ -1.92
UBP2YOR124C TY2B-DR3Q07791 1770 aaKnown RBP3.08□□□□□ -1.92
UBP2YOR124C TY2B-OR1Q12113 1770 aa3.08□□□□□ -1.92
UBP2YOR124C TY2B-DR1Q12472 1770 aa3.08□□□□□ -1.92
UBP2YOR124C TY2B-OR2Q12501 1770 aa3.08□□□□□ -1.92
UBP2YOR124C YOR1P53049 1477 aa3.07□□□□□ -1.92
UBP2YOR124C ULS1Q08562 1619 aa3.07□□□□□ -1.92
UBP2YOR124C NSR1P27476 414 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
UBP2YOR124C TY2B-BQ12491 1770 aa3.07□□□□□ -1.92
UBP2YOR124C DNA2P38859 1522 aa3.06□□□□□ -1.92
UBP2YOR124C RSE1Q04693 1361 aaKnown RBP3.06□□□□□ -1.92
UBP2YOR124C YBT1P32386 1661 aa3.05□□□□□ -1.92
UBP2YOR124C PTP3P40048 928 aa3.05□□□□□ -1.92
UBP2YOR124C TY3B-GQ99315 1547 aa3.05□□□□□ -1.92
UBP2YOR124C IKI3Q06706 1349 aaKnown RBP3.04□□□□□ -1.92
UBP2YOR124C TY1B-HO13535 1793 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-DR5P0C2I2 1755 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-DR6P0C2I3 1755 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-LR2P0C2I5 1755 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-LR3P0C2I6 1755 aaKnown RBP3.04□□□□□ -1.92
UBP2YOR124C TY1B-PR1P0C2I9 1755 aaKnown RBP3.04□□□□□ -1.92
UBP2YOR124C TY1B-PR2P0C2J0 1756 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-PR3P0C2J1 1755 aaKnown RBP3.04□□□□□ -1.92
UBP2YOR124C TY1B-JR1P47098 1755 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-ML2Q03434 1755 aaKnown RBP3.04□□□□□ -1.92
UBP2YOR124C TY1B-ER1Q03612 1755 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-ML1Q04711 1755 aaKnown RBP3.04□□□□□ -1.92
UBP2YOR124C TY1B-GR2Q12269 1755 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-OLQ12273 1755 aa3.04□□□□□ -1.92
UBP2YOR124C TY1B-PLQ12414 1755 aaKnown RBP3.04□□□□□ -1.92
UBP2YOR124C HAA1Q12753 694 aaKnown RBP3.04□□□□□ -1.92
UBP2YOR124C SWR1Q05471 1514 aa3.03□□□□□ -1.92
UBP2YOR124C SCC2Q04002 1493 aa3.03□□□□□ -1.92
UBP2YOR124C BPT1P14772 1559 aa3.03□□□□□ -1.92
UBP2YOR124C YTA7P40340 1379 aa3.03□□□□□ -1.92
UBP2YOR124C YLR419WQ06698 1435 aaKnown RBP3.03□□□□□ -1.92
UBP2YOR124C YCF1P39109 1515 aaKnown RBP3.03□□□□□ -1.92
UBP2YOR124C SMC4Q12267 1418 aa3.02□□□□□ -1.93
UBP2YOR124C RKR1Q04781 1562 aa3.02□□□□□ -1.93
UBP2YOR124C RPL17AP05740 184 aaKnown RBP3.02□□□□□ -1.93
UBP2YOR124C RPL17BP46990 184 aaKnown RBP3.02□□□□□ -1.93
UBP2YOR124C TY1B-BRQ12193 1756 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms