RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C MTC1P47018 478 aaKnown RBP4.51□□□□□ -1.69
YAR009CYAR009C DRS1P32892 752 aaKnown RBP4.49□□□□□ -1.69
YAR009CYAR009C FAP1P53971 965 aa4.32□□□□□ -1.72
YAR009CYAR009C PRY3P47033 881 aa4.03□□□□□ -1.76
YAR009CYAR009C MON2P48563 1636 aaPredicted RBP3.94□□□□□ -1.78
YAR009CYAR009C BFR2Q06631 534 aaKnown RBP3.86□□□□□ -1.79
YAR009CYAR009C DIP2Q12220 943 aaPredicted RBP3.84□□□□□ -1.8
YAR009CYAR009C AVT3P36062 692 aa3.76□□□□□ -1.81
YAR009CYAR009C TY1B-DR4Q07793 1604 aa3.72□□□□□ -1.81
YAR009CYAR009C ISW2Q08773 1120 aa3.7□□□□□ -1.82
YAR009CYAR009C PRI1P10363 409 aa3.66□□□□□ -1.82
YAR009CYAR009C RPG1P38249 964 aaKnown RBP3.64□□□□□ -1.83
YAR009CYAR009C RSE1Q04693 1361 aaKnown RBP3.64□□□□□ -1.83
YAR009CYAR009C AAD16Q02895 342 aa3.61□□□□□ -1.83
YAR009CYAR009C TFA1P36100 482 aa3.58□□□□□ -1.84
YAR009CYAR009C SWR1Q05471 1514 aa3.52□□□□□ -1.85
YAR009CYAR009C RPL17AP05740 184 aaKnown RBP3.5□□□□□ -1.85
YAR009CYAR009C RPL17BP46990 184 aaKnown RBP3.5□□□□□ -1.85
YAR009CYAR009C REB1P21538 810 aa3.48□□□□□ -1.85
YAR009CYAR009C TCB3Q03640 1545 aaKnown RBP3.48□□□□□ -1.85
YAR009CYAR009C TSR3Q12094 313 aaKnown RBP3.47□□□□□ -1.85
YAR009CYAR009C HAA1Q12753 694 aaKnown RBP3.47□□□□□ -1.85
YAR009CYAR009C INO80P53115 1489 aa3.47□□□□□ -1.85
YAR009CYAR009C KOG1P38873 1557 aa3.47□□□□□ -1.85
YAR009CYAR009C THO2P53552 1597 aaKnown RBP3.39□□□□□ -1.87
YAR009CYAR009C SSK2P53599 1579 aa3.39□□□□□ -1.87
YAR009CYAR009C MRPL32P25348 183 aa3.35□□□□□ -1.87
YAR009CYAR009C SPT21P35209 758 aa3.35□□□□□ -1.87
YAR009CYAR009C DNA2P38859 1522 aa3.35□□□□□ -1.87
YAR009CYAR009C PEP1P32319 1579 aa3.32□□□□□ -1.88
YAR009CYAR009C YCK3P39962 524 aa3.3□□□□□ -1.88
YAR009CYAR009C RIM101P33400 625 aa3.3□□□□□ -1.88
YAR009CYAR009C SIN3P22579 1536 aa3.28□□□□□ -1.88
YAR009CYAR009C HSL1P34244 1518 aa3.28□□□□□ -1.88
YAR009CYAR009C YKR023WP36119 530 aaKnown RBP3.26□□□□□ -1.89
YAR009CYAR009C ATG2P53855 1592 aa3.24□□□□□ -1.89
YAR009CYAR009C HOP09932 586 aa3.2□□□□□ -1.9
YAR009CYAR009C CDC27P38042 758 aa3.2□□□□□ -1.9
YAR009CYAR009C TFC8Q12308 588 aa3.2□□□□□ -1.9
YAR009CYAR009C OXP1P28273 1286 aa3.19□□□□□ -1.9
YAR009CYAR009C HIR3P47171 1648 aa3.19□□□□□ -1.9
YAR009CYAR009C YIL055CP40523 627 aaKnown RBP3.18□□□□□ -1.9
YAR009CYAR009C DCD1P06773 312 aa3.18□□□□□ -1.9
YAR009CYAR009C TY1B-BRQ12193 1756 aa3.17□□□□□ -1.9
YAR009CYAR009C TY1B-GR3Q12316 1755 aa3.17□□□□□ -1.9
YAR009CYAR009C TY1B-ORQ92393 1755 aa3.17□□□□□ -1.9
YAR009CYAR009C PTP3P40048 928 aa3.17□□□□□ -1.9
YAR009CYAR009C SIS1P25294 352 aaKnown RBP3.16□□□□□ -1.9
YAR009CYAR009C YAH1Q12184 172 aaKnown RBP3.16□□□□□ -1.9
YAR009CYAR009C SPA2P23201 1466 aaKnown RBP3.15□□□□□ -1.9
YAR009CYAR009C REV3P14284 1504 aa3.15□□□□□ -1.91
YAR009CYAR009C MYO2P19524 1574 aaKnown RBP3.15□□□□□ -1.91
YAR009CYAR009C YGL015CP33199 130 aa3.14□□□□□ -1.91
YAR009CYAR009C SSP1P38871 571 aa3.14□□□□□ -1.91
YAR009CYAR009C SPT6P23615 1451 aaKnown RBP3.13□□□□□ -1.91
YAR009CYAR009C MDS3P53094 1487 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-HO13535 1793 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-DR5P0C2I2 1755 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-DR6P0C2I3 1755 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-LR2P0C2I5 1755 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-LR3P0C2I6 1755 aaKnown RBP3.13□□□□□ -1.91
YAR009CYAR009C TY1B-PR1P0C2I9 1755 aaKnown RBP3.13□□□□□ -1.91
YAR009CYAR009C TY1B-PR2P0C2J0 1756 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-PR3P0C2J1 1755 aaKnown RBP3.13□□□□□ -1.91
YAR009CYAR009C TY2B-LR1P0C2J3 1770 aa3.13□□□□□ -1.91
YAR009CYAR009C TY2B-FP0CX63 1770 aa3.13□□□□□ -1.91
YAR009CYAR009C TY2B-GR2P0CX64 1770 aa3.13□□□□□ -1.91
YAR009CYAR009C TY2B-CP25384 1770 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-JR1P47098 1755 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-ML2Q03434 1755 aaKnown RBP3.13□□□□□ -1.91
YAR009CYAR009C TY2B-DR2Q03494 1770 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-ER1Q03612 1755 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-DR1Q03855 1755 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-ML1Q04711 1755 aaKnown RBP3.13□□□□□ -1.91
YAR009CYAR009C TY2B-DR3Q07791 1770 aaKnown RBP3.13□□□□□ -1.91
YAR009CYAR009C TY2B-OR1Q12113 1770 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-GR2Q12269 1755 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-OLQ12273 1755 aa3.13□□□□□ -1.91
YAR009CYAR009C TY1B-PLQ12414 1755 aaKnown RBP3.13□□□□□ -1.91
YAR009CYAR009C TY2B-DR1Q12472 1770 aa3.13□□□□□ -1.91
YAR009CYAR009C TY2B-OR2Q12501 1770 aa3.13□□□□□ -1.91
YAR009CYAR009C RSM7P47150 247 aa3.11□□□□□ -1.91
YAR009CYAR009C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
YAR009CYAR009C BCH2P36122 765 aa3.11□□□□□ -1.91
YAR009CYAR009C YLR271WQ06152 274 aa3.1□□□□□ -1.91
YAR009CYAR009C IRC20Q06554 1556 aa3.09□□□□□ -1.91
YAR009CYAR009C UBP10P53874 792 aaPredicted RBP3.09□□□□□ -1.91
YAR009CYAR009C TY2B-BQ12491 1770 aa3.09□□□□□ -1.92
YAR009CYAR009C TY1B-DR3Q99231 1755 aa3.09□□□□□ -1.92
YAR009CYAR009C RPA190P10964 1664 aaKnown RBP3.09□□□□□ -1.92
YAR009CYAR009C MAP2P38174 421 aaKnown RBP3.08□□□□□ -1.92
YAR009CYAR009C ESP1Q03018 1630 aa3.08□□□□□ -1.92
YAR009CYAR009C SCY1P53009 804 aa3.07□□□□□ -1.92
YAR009CYAR009C AI2P03876 854 aa3.06□□□□□ -1.92
YAR009CYAR009C BBC1P47068 1157 aa3.06□□□□□ -1.92
YAR009CYAR009C BUD4P47136 1447 aa3.06□□□□□ -1.92
YAR009CYAR009C BNI1P41832 1953 aa3.06□□□□□ -1.92
YAR009CYAR009C MIF2P35201 549 aa3.06□□□□□ -1.92
YAR009CYAR009C EPS1P40557 701 aa3.05□□□□□ -1.92
YAR009CYAR009C MGA2P40578 1113 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms