RNA–Protein interactions for RNA: YMR045C

YMR045C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR045C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR045CYMR045C MTC1P47018 478 aaKnown RBP3.11□□□□□ -1.91
YMR045CYMR045C TFA1P36100 482 aa3.04□□□□□ -1.92
YMR045CYMR045C RQC2Q12532 1038 aaKnown RBP2.94□□□□□ -1.94
YMR045CYMR045C SCT1P32784 759 aa2.9□□□□□ -1.95
YMR045CYMR045C AIM44Q99299 758 aa2.9□□□□□ -1.95
YMR045CYMR045C DRS1P32892 752 aaKnown RBP2.85□□□□□ -1.95
YMR045CYMR045C NOP53Q12080 455 aaKnown RBP2.81□□□□□ -1.96
YMR045CYMR045C MNN4P36044 1178 aa2.73□□□□□ -1.97
YMR045CYMR045C FPR3P38911 411 aaKnown RBP2.71□□□□□ -1.98
YMR045CYMR045C AVT3P36062 692 aa2.7□□□□□ -1.98
YMR045CYMR045C RTT106P40161 455 aa2.68□□□□□ -1.98
YMR045CYMR045C SAS10Q12136 610 aaPredicted RBP2.65□□□□□ -1.98
YMR045CYMR045C NSR1P27476 414 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
YMR045CYMR045C IFH1P39520 1085 aa2.62□□□□□ -1.99
YMR045CYMR045C TAF7Q05021 590 aa2.62□□□□□ -1.99
YMR045CYMR045C LEU3P08638 886 aa2.61□□□□□ -1.99
YMR045CYMR045C PSH1Q12161 406 aa2.6□□□□□ -1.99
YMR045CYMR045C ENP1P38333 483 aaKnown RBP2.6□□□□□ -1.99
YMR045CYMR045C NOP2P40991 618 aaKnown RBP2.59□□□□□ -2
YMR045CYMR045C LEO1P38439 464 aa2.58□□□□□ -2
YMR045CYMR045C ASF1P32447 279 aa2.58□□□□□ -2
YMR045CYMR045C POL5P39985 1022 aaKnown RBP2.57□□□□□ -2
YMR045CYMR045C ENT3P47160 408 aa2.57□□□□□ -2
YMR045CYMR045C NAP1P25293 417 aaKnown RBP2.56□□□□□ -2
YMR045CYMR045C DOS2P54858 310 aa2.55□□□□□ -2
YMR045CYMR045C ORC1P54784 914 aaPredicted RBP2.55□□□□□ -2
YMR045CYMR045C NOP8Q08287 484 aaPredicted RBP2.55□□□□□ -2
YMR045CYMR045C RAD26P40352 1085 aa2.54□□□□□ -2
YMR045CYMR045C MAK21Q12176 1025 aaKnown RBP2.54□□□□□ -2
YMR045CYMR045C YPR148CQ06523 435 aa2.53□□□□□ -2
YMR045CYMR045C RLF2Q12495 606 aa2.53□□□□□ -2.01
YMR045CYMR045C YGL081WP53156 320 aa2.52□□□□□ -2.01
YMR045CYMR045C SVF1Q05515 481 aa2.52□□□□□ -2.01
YMR045CYMR045C TAF13P11747 167 aa2.51□□□□□ -2.01
YMR045CYMR045C ABP1P15891 592 aaKnown RBP2.51□□□□□ -2.01
YMR045CYMR045C BFR2Q06631 534 aaKnown RBP2.51□□□□□ -2.01
YMR045CYMR045C SIS2P36024 562 aa2.5□□□□□ -2.01
YMR045CYMR045C NOP7P53261 605 aaKnown RBP2.5□□□□□ -2.01
YMR045CYMR045C NAB3P38996 802 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
YMR045CYMR045C YRB30P53107 440 aaPredicted RBP2.49□□□□□ -2.01
YMR045CYMR045C CKB1P43639 278 aa2.49□□□□□ -2.01
YMR045CYMR045C RSE1Q04693 1361 aaKnown RBP2.48□□□□□ -2.01
YMR045CYMR045C DEF1P35732 738 aaKnown RBP2.48□□□□□ -2.01
YMR045CYMR045C URN1Q06525 465 aaKnown RBP2.47□□□□□ -2.01
YMR045CYMR045C HIF1Q12373 385 aa2.47□□□□□ -2.01
YMR045CYMR045C RMD1Q03441 430 aa2.46□□□□□ -2.02
YMR045CYMR045C ISW2Q08773 1120 aa2.46□□□□□ -2.02
YMR045CYMR045C AIM7Q12156 149 aa2.46□□□□□ -2.02
YMR045CYMR045C RIM101P33400 625 aa2.46□□□□□ -2.02
YMR045CYMR045C KEX1P09620 729 aa2.45□□□□□ -2.02
YMR045CYMR045C EBP2P36049 427 aaKnown RBP2.45□□□□□ -2.02
YMR045CYMR045C RPN11P43588 306 aaKnown RBP2.45□□□□□ -2.02
YMR045CYMR045C ENV11P53246 860 aa2.44□□□□□ -2.02
YMR045CYMR045C RNA1P11745 407 aaKnown RBP2.44□□□□□ -2.02
YMR045CYMR045C MRX12P47084 519 aa2.44□□□□□ -2.02
YMR045CYMR045C FUN12P39730 1002 aaKnown RBP2.44□□□□□ -2.02
YMR045CYMR045C YJL049WP47048 450 aa2.44□□□□□ -2.02
YMR045CYMR045C INO80P53115 1489 aa2.43□□□□□ -2.02
YMR045CYMR045C BNI4P53858 892 aa2.43□□□□□ -2.02
YMR045CYMR045C HGH1P48362 394 aaKnown RBP2.43□□□□□ -2.02
YMR045CYMR045C DIP2Q12220 943 aaPredicted RBP2.43□□□□□ -2.02
YMR045CYMR045C NMD2P38798 1089 aaKnown RBP2.42□□□□□ -2.02
YMR045CYMR045C SPT5P27692 1063 aaKnown RBP2.42□□□□□ -2.02
YMR045CYMR045C NMD3P38861 518 aaKnown RBP2.42□□□□□ -2.02
YMR045CYMR045C NOG1Q02892 647 aaKnown RBP2.42□□□□□ -2.02
YMR045CYMR045C VHS3Q08438 674 aa2.42□□□□□ -2.02
YMR045CYMR045C YMR124WP39523 943 aaKnown RBP2.41□□□□□ -2.02
YMR045CYMR045C COG8Q04632 607 aa2.41□□□□□ -2.02
YMR045CYMR045C RPP1AP05318 106 aaPredicted RBP2.41□□□□□ -2.02
YMR045CYMR045C KRI1P42846 591 aaKnown RBP2.41□□□□□ -2.02
YMR045CYMR045C CLB5P30283 435 aa2.41□□□□□ -2.02
YMR045CYMR045C TPD3P31383 635 aa2.4□□□□□ -2.02
YMR045CYMR045C ETT1Q08421 412 aaKnown RBP2.4□□□□□ -2.02
YMR045CYMR045C ACE2P21192 770 aa2.4□□□□□ -2.03
YMR045CYMR045C PRP45P28004 379 aaPredicted RBP2.4□□□□□ -2.03
YMR045CYMR045C PRI1P10363 409 aa2.4□□□□□ -2.03
YMR045CYMR045C MIF2P35201 549 aa2.4□□□□□ -2.03
YMR045CYMR045C SPT21P35209 758 aa2.4□□□□□ -2.03
YMR045CYMR045C PHM8P40025 321 aa2.39□□□□□ -2.03
YMR045CYMR045C PAP2P53632 584 aaKnown RBP2.39□□□□□ -2.03
YMR045CYMR045C HPC2Q01448 625 aa2.39□□□□□ -2.03
YMR045CYMR045C RPN1P38764 993 aaKnown RBP2.39□□□□□ -2.03
YMR045CYMR045C UTP13Q05946 817 aaKnown RBP2.39□□□□□ -2.03
YMR045CYMR045C TOP1P04786 769 aa2.39□□□□□ -2.03
YMR045CYMR045C MAK16P10962 306 aaPredicted RBP2.39□□□□□ -2.03
YMR045CYMR045C HSC82P15108 705 aaKnown RBP2.38□□□□□ -2.03
YMR045CYMR045C JIP3O13555 125 aa2.38□□□□□ -2.03
YMR045CYMR045C TRZ1P36159 838 aaPredicted RBP2.38□□□□□ -2.03
YMR045CYMR045C ARP5P53946 755 aa2.38□□□□□ -2.03
YMR045CYMR045C NAF1P53919 492 aaKnown RBP2.38□□□□□ -2.03
YMR045CYMR045C CSE4P36012 229 aa2.37□□□□□ -2.03
YMR045CYMR045C ARL1P38116 183 aaKnown RBP2.37□□□□□ -2.03
YMR045CYMR045C SAS3P34218 831 aa2.37□□□□□ -2.03
YMR045CYMR045C RPP2AP05319 106 aaKnown RBP2.37□□□□□ -2.03
YMR045CYMR045C NNF2P53253 936 aa2.37□□□□□ -2.03
YMR045CYMR045C YNR021WP53723 404 aaKnown RBP2.37□□□□□ -2.03
YMR045CYMR045C FPR4Q06205 392 aaPredicted RBP2.37□□□□□ -2.03
YMR045CYMR045C MST1P07236 462 aa2.36□□□□□ -2.03
YMR045CYMR045C RPC82P32349 654 aa2.36□□□□□ -2.03
YMR045CYMR045C UBP10P53874 792 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms