RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W MTC1P47018 478 aaKnown RBP5.23□□□□□ -1.57
SEC21YNL287W FAP1P53971 965 aa4.71□□□□□ -1.66
SEC21YNL287W DRS1P32892 752 aaKnown RBP4.71□□□□□ -1.66
SEC21YNL287W PRI1P10363 409 aa4.48□□□□□ -1.69
SEC21YNL287W PRY3P47033 881 aa4.45□□□□□ -1.7
SEC21YNL287W AAD16Q02895 342 aa4.43□□□□□ -1.7
SEC21YNL287W YCK3P39962 524 aa4.35□□□□□ -1.71
SEC21YNL287W ISW2Q08773 1120 aa4.31□□□□□ -1.72
SEC21YNL287W RPG1P38249 964 aaKnown RBP4.27□□□□□ -1.73
SEC21YNL287W HAA1Q12753 694 aaKnown RBP4.22□□□□□ -1.73
SEC21YNL287W DIP2Q12220 943 aaPredicted RBP4.19□□□□□ -1.74
SEC21YNL287W TSR3Q12094 313 aaKnown RBP4.17□□□□□ -1.74
SEC21YNL287W RSE1Q04693 1361 aaKnown RBP4.08□□□□□ -1.76
SEC21YNL287W AVT3P36062 692 aa4.07□□□□□ -1.76
SEC21YNL287W MRPL32P25348 183 aa4□□□□□ -1.77
SEC21YNL287W RPL17AP05740 184 aaKnown RBP3.94□□□□□ -1.78
SEC21YNL287W RPL17BP46990 184 aaKnown RBP3.94□□□□□ -1.78
SEC21YNL287W REB1P21538 810 aa3.9□□□□□ -1.78
SEC21YNL287W YGL015CP33199 130 aa3.89□□□□□ -1.79
SEC21YNL287W SPT21P35209 758 aa3.86□□□□□ -1.79
SEC21YNL287W BFR2Q06631 534 aaKnown RBP3.85□□□□□ -1.79
SEC21YNL287W CDC27P38042 758 aa3.84□□□□□ -1.8
SEC21YNL287W YKR023WP36119 530 aaKnown RBP3.81□□□□□ -1.8
SEC21YNL287W UBP10P53874 792 aaPredicted RBP3.76□□□□□ -1.81
SEC21YNL287W TFC8Q12308 588 aa3.73□□□□□ -1.81
SEC21YNL287W MAP2P38174 421 aaKnown RBP3.71□□□□□ -1.82
SEC21YNL287W RIM101P33400 625 aa3.69□□□□□ -1.82
SEC21YNL287W HOP09932 586 aa3.67□□□□□ -1.82
SEC21YNL287W DCD1P06773 312 aa3.66□□□□□ -1.82
SEC21YNL287W BUD31P25337 157 aaPredicted RBP3.66□□□□□ -1.82
SEC21YNL287W BCH2P36122 765 aa3.59□□□□□ -1.84
SEC21YNL287W SCY1P53009 804 aa3.59□□□□□ -1.84
SEC21YNL287W TGL3P40308 642 aa3.58□□□□□ -1.84
SEC21YNL287W SLX5P32828 619 aaKnown RBP3.56□□□□□ -1.84
SEC21YNL287W OXP1P28273 1286 aa3.55□□□□□ -1.84
SEC21YNL287W TIF4632P39936 914 aaKnown RBP3.55□□□□□ -1.84
SEC21YNL287W EPS1P40557 701 aa3.48□□□□□ -1.85
SEC21YNL287W BDF1P35817 686 aa3.48□□□□□ -1.85
SEC21YNL287W MST1P07236 462 aa3.48□□□□□ -1.85
SEC21YNL287W NSR1P27476 414 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
SEC21YNL287W UBP9P39967 754 aa3.45□□□□□ -1.86
SEC21YNL287W RSM7P47150 247 aa3.41□□□□□ -1.86
SEC21YNL287W PTP3P40048 928 aa3.4□□□□□ -1.87
SEC21YNL287W YIL055CP40523 627 aaKnown RBP3.4□□□□□ -1.87
SEC21YNL287W AI2P03876 854 aa3.38□□□□□ -1.87
SEC21YNL287W SIS1P25294 352 aaKnown RBP3.38□□□□□ -1.87
SEC21YNL287W TFA1P36100 482 aa3.38□□□□□ -1.87
SEC21YNL287W YOR238WQ08634 303 aa3.37□□□□□ -1.87
SEC21YNL287W BBC1P47068 1157 aa3.37□□□□□ -1.87
SEC21YNL287W YLR271WQ06152 274 aa3.35□□□□□ -1.87
SEC21YNL287W PSD2P53037 1138 aaKnown RBP3.34□□□□□ -1.87
SEC21YNL287W YAP5P40574 245 aa3.34□□□□□ -1.87
SEC21YNL287W YBL029C-AQ3E756 94 aa3.34□□□□□ -1.87
SEC21YNL287W VNX1P42839 908 aa3.34□□□□□ -1.88
SEC21YNL287W YAH1Q12184 172 aaKnown RBP3.32□□□□□ -1.88
SEC21YNL287W SSP1P38871 571 aa3.26□□□□□ -1.89
SEC21YNL287W FKH1P40466 484 aa3.26□□□□□ -1.89
SEC21YNL287W AIR2Q12476 344 aaKnown RBP3.26□□□□□ -1.89
SEC21YNL287W TIF11P38912 153 aaKnown RBP3.26□□□□□ -1.89
SEC21YNL287W SPP1Q03012 353 aa3.25□□□□□ -1.89
SEC21YNL287W IOC2Q12072 812 aa3.25□□□□□ -1.89
SEC21YNL287W MRM1P25270 412 aa3.24□□□□□ -1.89
SEC21YNL287W VPS29P38759 282 aa3.23□□□□□ -1.89
SEC21YNL287W WSC3Q12215 556 aa3.23□□□□□ -1.89
SEC21YNL287W MSB4Q12317 492 aa3.22□□□□□ -1.89
SEC21YNL287W CST9Q06032 482 aa3.22□□□□□ -1.89
SEC21YNL287W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SEC21YNL287W GTT3P39996 337 aa3.21□□□□□ -1.9
SEC21YNL287W MGA2P40578 1113 aa3.21□□□□□ -1.9
SEC21YNL287W YMR1P47147 688 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SEC21YNL287W SAM3Q08986 587 aa3.2□□□□□ -1.9
SEC21YNL287W LDB19Q12502 818 aa3.2□□□□□ -1.9
SEC21YNL287W ULI1P43604 169 aa3.19□□□□□ -1.9
SEC21YNL287W STS1P38637 319 aa3.19□□□□□ -1.9
SEC21YNL287W PIB1Q06651 286 aa3.19□□□□□ -1.9
SEC21YNL287W YOL036WQ08206 761 aa3.19□□□□□ -1.9
SEC21YNL287W RTG3P38165 486 aa3.18□□□□□ -1.9
SEC21YNL287W EAP1P36041 632 aaKnown RBP3.18□□□□□ -1.9
SEC21YNL287W VMA1P17255 1071 aaKnown RBP3.17□□□□□ -1.9
SEC21YNL287W DBP1P24784 617 aaKnown RBP3.17□□□□□ -1.9
SEC21YNL287W TRP5P00931 707 aaKnown RBP3.15□□□□□ -1.9
SEC21YNL287W RCR1P38212 213 aa3.15□□□□□ -1.9
SEC21YNL287W BMT6Q12291 365 aa3.14□□□□□ -1.91
SEC21YNL287W SEC61P32915 480 aa3.14□□□□□ -1.91
SEC21YNL287W SET4P42948 560 aa3.14□□□□□ -1.91
SEC21YNL287W YJL171CP46992 396 aa3.14□□□□□ -1.91
SEC21YNL287W YFR006WP43590 535 aa3.13□□□□□ -1.91
SEC21YNL287W DAN4P47179 1161 aa3.13□□□□□ -1.91
SEC21YNL287W YNL035CP53962 389 aaKnown RBP3.13□□□□□ -1.91
SEC21YNL287W RTG1P32607 177 aa3.13□□□□□ -1.91
SEC21YNL287W ABP1P15891 592 aaKnown RBP3.12□□□□□ -1.91
SEC21YNL287W NCR1Q12200 1170 aa3.11□□□□□ -1.91
SEC21YNL287W JIP4Q03361 876 aa3.1□□□□□ -1.91
SEC21YNL287W GYP5Q12344 894 aa3.08□□□□□ -1.92
SEC21YNL287W NST1P53935 1240 aa3.07□□□□□ -1.92
SEC21YNL287W HTA1P04911 132 aaKnown RBP3.06□□□□□ -1.92
SEC21YNL287W HTA2P04912 132 aa3.06□□□□□ -1.92
SEC21YNL287W MAK11P20484 414 aaKnown RBP3.06□□□□□ -1.92
SEC21YNL287W PTC4P38089 393 aa3.06□□□□□ -1.92
SEC21YNL287W RAM2P29703 316 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms