RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W FAP1P53971 965 aa6.29□□□□□ -1.4
RTT107YHR154W MTC1P47018 478 aaKnown RBP6.04□□□□□ -1.44
RTT107YHR154W PRY3P47033 881 aa5.92□□□□□ -1.46
RTT107YHR154W AAD16Q02895 342 aa5.54□□□□□ -1.52
RTT107YHR154W HAA1Q12753 694 aaKnown RBP5.47□□□□□ -1.53
RTT107YHR154W PRI1P10363 409 aa5.44□□□□□ -1.54
RTT107YHR154W YCK3P39962 524 aa5.42□□□□□ -1.54
RTT107YHR154W ISW2Q08773 1120 aa5.19□□□□□ -1.58
RTT107YHR154W TSR3Q12094 313 aaKnown RBP5.17□□□□□ -1.58
RTT107YHR154W RPG1P38249 964 aaKnown RBP5.15□□□□□ -1.59
RTT107YHR154W DRS1P32892 752 aaKnown RBP5.04□□□□□ -1.6
RTT107YHR154W MRPL32P25348 183 aa4.99□□□□□ -1.61
RTT107YHR154W YGL015CP33199 130 aa4.93□□□□□ -1.62
RTT107YHR154W BUD31P25337 157 aaPredicted RBP4.77□□□□□ -1.65
RTT107YHR154W RSE1Q04693 1361 aaKnown RBP4.67□□□□□ -1.66
RTT107YHR154W REB1P21538 810 aa4.65□□□□□ -1.67
RTT107YHR154W DIP2Q12220 943 aaPredicted RBP4.63□□□□□ -1.67
RTT107YHR154W RPL17AP05740 184 aaKnown RBP4.58□□□□□ -1.68
RTT107YHR154W RPL17BP46990 184 aaKnown RBP4.58□□□□□ -1.68
RTT107YHR154W SIS1P25294 352 aaKnown RBP4.57□□□□□ -1.68
RTT107YHR154W CDC27P38042 758 aa4.56□□□□□ -1.68
RTT107YHR154W MAP2P38174 421 aaKnown RBP4.51□□□□□ -1.69
RTT107YHR154W UBP10P53874 792 aaPredicted RBP4.51□□□□□ -1.69
RTT107YHR154W UBP9P39967 754 aa4.45□□□□□ -1.7
RTT107YHR154W TIF4632P39936 914 aaKnown RBP4.38□□□□□ -1.71
RTT107YHR154W BFR2Q06631 534 aaKnown RBP4.37□□□□□ -1.71
RTT107YHR154W YKR023WP36119 530 aaKnown RBP4.36□□□□□ -1.71
RTT107YHR154W DCD1P06773 312 aa4.34□□□□□ -1.72
RTT107YHR154W HOP09932 586 aa4.34□□□□□ -1.72
RTT107YHR154W SCY1P53009 804 aa4.33□□□□□ -1.72
RTT107YHR154W MON2P48563 1636 aaPredicted RBP4.31□□□□□ -1.72
RTT107YHR154W SLX5P32828 619 aaKnown RBP4.31□□□□□ -1.72
RTT107YHR154W TGL3P40308 642 aa4.31□□□□□ -1.72
RTT107YHR154W TFC8Q12308 588 aa4.29□□□□□ -1.72
RTT107YHR154W TFA1P36100 482 aa4.28□□□□□ -1.72
RTT107YHR154W RQC2Q12532 1038 aaKnown RBP4.26□□□□□ -1.73
RTT107YHR154W INO80P53115 1489 aa4.25□□□□□ -1.73
RTT107YHR154W SPT21P35209 758 aa4.24□□□□□ -1.73
RTT107YHR154W AVT3P36062 692 aa4.2□□□□□ -1.74
RTT107YHR154W YBL029C-AQ3E756 94 aa4.14□□□□□ -1.75
RTT107YHR154W BCH2P36122 765 aa4.13□□□□□ -1.75
RTT107YHR154W YJL171CP46992 396 aa4.06□□□□□ -1.76
RTT107YHR154W DNA2P38859 1522 aa4.05□□□□□ -1.76
RTT107YHR154W YOR238WQ08634 303 aa4.05□□□□□ -1.76
RTT107YHR154W SPP1Q03012 353 aa4.04□□□□□ -1.76
RTT107YHR154W VNX1P42839 908 aa4.03□□□□□ -1.76
RTT107YHR154W WSC3Q12215 556 aa4.02□□□□□ -1.77
RTT107YHR154W KOG1P38873 1557 aa4.02□□□□□ -1.77
RTT107YHR154W MST1P07236 462 aa4□□□□□ -1.77
RTT107YHR154W EPS1P40557 701 aa3.99□□□□□ -1.77
RTT107YHR154W BDF1P35817 686 aa3.98□□□□□ -1.77
RTT107YHR154W SWR1Q05471 1514 aa3.98□□□□□ -1.77
RTT107YHR154W AIR2Q12476 344 aaKnown RBP3.97□□□□□ -1.77
RTT107YHR154W RIM101P33400 625 aa3.95□□□□□ -1.78
RTT107YHR154W TAF7Q05021 590 aa3.95□□□□□ -1.78
RTT107YHR154W FKH1P40466 484 aa3.94□□□□□ -1.78
RTT107YHR154W TIF11P38912 153 aaKnown RBP3.92□□□□□ -1.78
RTT107YHR154W GTT3P39996 337 aa3.92□□□□□ -1.78
RTT107YHR154W YAP5P40574 245 aa3.92□□□□□ -1.78
RTT107YHR154W BMT6Q12291 365 aa3.91□□□□□ -1.78
RTT107YHR154W NSR1P27476 414 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
RTT107YHR154W PTP3P40048 928 aa3.88□□□□□ -1.79
RTT107YHR154W LDB19Q12502 818 aa3.88□□□□□ -1.79
RTT107YHR154W TY1B-DR4Q07793 1604 aa3.87□□□□□ -1.79
RTT107YHR154W ULI1P43604 169 aa3.85□□□□□ -1.79
RTT107YHR154W TCB3Q03640 1545 aaKnown RBP3.85□□□□□ -1.79
RTT107YHR154W YIL055CP40523 627 aaKnown RBP3.85□□□□□ -1.79
RTT107YHR154W SPA2P23201 1466 aaKnown RBP3.84□□□□□ -1.79
RTT107YHR154W BBC1P47068 1157 aa3.84□□□□□ -1.79
RTT107YHR154W DMA1P38823 416 aa3.82□□□□□ -1.8
RTT107YHR154W OXP1P28273 1286 aa3.8□□□□□ -1.8
RTT107YHR154W PIB1Q06651 286 aa3.79□□□□□ -1.8
RTT107YHR154W IOC2Q12072 812 aa3.78□□□□□ -1.8
RTT107YHR154W AI2P03876 854 aa3.76□□□□□ -1.81
RTT107YHR154W RTG1P32607 177 aa3.75□□□□□ -1.81
RTT107YHR154W RSM7P47150 247 aa3.74□□□□□ -1.81
RTT107YHR154W NCR1Q12200 1170 aa3.74□□□□□ -1.81
RTT107YHR154W EAP1P36041 632 aaKnown RBP3.73□□□□□ -1.81
RTT107YHR154W MSB4Q12317 492 aa3.72□□□□□ -1.81
RTT107YHR154W YAH1Q12184 172 aaKnown RBP3.71□□□□□ -1.82
RTT107YHR154W SET4P42948 560 aa3.71□□□□□ -1.82
RTT107YHR154W TFG1P41895 735 aaPredicted RBP3.7□□□□□ -1.82
RTT107YHR154W TRP5P00931 707 aaKnown RBP3.68□□□□□ -1.82
RTT107YHR154W BCK2P33306 851 aa3.68□□□□□ -1.82
RTT107YHR154W YNL035CP53962 389 aaKnown RBP3.67□□□□□ -1.82
RTT107YHR154W YOL036WQ08206 761 aa3.67□□□□□ -1.82
RTT107YHR154W SEC61P32915 480 aa3.66□□□□□ -1.82
RTT107YHR154W THO2P53552 1597 aaKnown RBP3.66□□□□□ -1.82
RTT107YHR154W SAP30P38429 201 aa3.66□□□□□ -1.82
RTT107YHR154W MIF2P35201 549 aa3.64□□□□□ -1.83
RTT107YHR154W HSL1P34244 1518 aa3.64□□□□□ -1.83
RTT107YHR154W ECM5Q03214 1411 aa3.64□□□□□ -1.83
RTT107YHR154W SPT6P23615 1451 aaKnown RBP3.64□□□□□ -1.83
RTT107YHR154W REV3P14284 1504 aa3.62□□□□□ -1.83
RTT107YHR154W BUD4P47136 1447 aa3.62□□□□□ -1.83
RTT107YHR154W CHL1P22516 861 aaPredicted RBP3.61□□□□□ -1.83
RTT107YHR154W MRM1P25270 412 aa3.61□□□□□ -1.83
RTT107YHR154W MDS3P53094 1487 aa3.6□□□□□ -1.83
RTT107YHR154W LEO1P38439 464 aa3.6□□□□□ -1.83
RTT107YHR154W YDL129WQ07555 291 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms