RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C DRS1P32892 752 aaKnown RBP4.64□□□□□ -1.67
UBR1YGR184C MTC1P47018 478 aaKnown RBP4.34□□□□□ -1.71
UBR1YGR184C TFA1P36100 482 aa4.32□□□□□ -1.72
UBR1YGR184C RQC2Q12532 1038 aaKnown RBP4.27□□□□□ -1.73
UBR1YGR184C BFR2Q06631 534 aaKnown RBP4.22□□□□□ -1.73
UBR1YGR184C AVT3P36062 692 aa3.92□□□□□ -1.78
UBR1YGR184C TAF7Q05021 590 aa3.89□□□□□ -1.79
UBR1YGR184C DIP2Q12220 943 aaPredicted RBP3.84□□□□□ -1.8
UBR1YGR184C LEO1P38439 464 aa3.67□□□□□ -1.82
UBR1YGR184C RSE1Q04693 1361 aaKnown RBP3.6□□□□□ -1.83
UBR1YGR184C DMA1P38823 416 aa3.55□□□□□ -1.84
UBR1YGR184C LEU3P08638 886 aa3.53□□□□□ -1.84
UBR1YGR184C ISW2Q08773 1120 aa3.49□□□□□ -1.85
UBR1YGR184C SAS10Q12136 610 aaPredicted RBP3.44□□□□□ -1.86
UBR1YGR184C SSP1P38871 571 aa3.39□□□□□ -1.87
UBR1YGR184C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
UBR1YGR184C RIM101P33400 625 aa3.39□□□□□ -1.87
UBR1YGR184C RPN1P38764 993 aaKnown RBP3.39□□□□□ -1.87
UBR1YGR184C RPL17AP05740 184 aaKnown RBP3.37□□□□□ -1.87
UBR1YGR184C RPL17BP46990 184 aaKnown RBP3.37□□□□□ -1.87
UBR1YGR184C AIM44Q99299 758 aa3.34□□□□□ -1.87
UBR1YGR184C PTP3P40048 928 aa3.33□□□□□ -1.88
UBR1YGR184C SPT21P35209 758 aa3.32□□□□□ -1.88
UBR1YGR184C IFH1P39520 1085 aa3.32□□□□□ -1.88
UBR1YGR184C HGH1P48362 394 aaKnown RBP3.32□□□□□ -1.88
UBR1YGR184C CKB1P43639 278 aa3.31□□□□□ -1.88
UBR1YGR184C RLF2Q12495 606 aa3.31□□□□□ -1.88
UBR1YGR184C REB1P21538 810 aa3.3□□□□□ -1.88
UBR1YGR184C RPG1P38249 964 aaKnown RBP3.3□□□□□ -1.88
UBR1YGR184C PRI1P10363 409 aa3.26□□□□□ -1.89
UBR1YGR184C MGA2P40578 1113 aa3.26□□□□□ -1.89
UBR1YGR184C YPR148CQ06523 435 aa3.24□□□□□ -1.89
UBR1YGR184C YIL055CP40523 627 aaKnown RBP3.22□□□□□ -1.89
UBR1YGR184C NOP53Q12080 455 aaKnown RBP3.22□□□□□ -1.89
UBR1YGR184C YNR021WP53723 404 aaKnown RBP3.2□□□□□ -1.9
UBR1YGR184C AIM7Q12156 149 aa3.19□□□□□ -1.9
UBR1YGR184C OXP1P28273 1286 aa3.19□□□□□ -1.9
UBR1YGR184C AAD16Q02895 342 aa3.19□□□□□ -1.9
UBR1YGR184C MAK21Q12176 1025 aaKnown RBP3.19□□□□□ -1.9
UBR1YGR184C RSM7P47150 247 aa3.18□□□□□ -1.9
UBR1YGR184C DMA2P53924 522 aa3.18□□□□□ -1.9
UBR1YGR184C YLR271WQ06152 274 aa3.18□□□□□ -1.9
UBR1YGR184C DSF2P38213 736 aa3.17□□□□□ -1.9
UBR1YGR184C SPB4P25808 606 aaPredicted RBP3.15□□□□□ -1.9
UBR1YGR184C NAP1P25293 417 aaKnown RBP3.15□□□□□ -1.91
UBR1YGR184C NOP8Q08287 484 aaPredicted RBP3.14□□□□□ -1.91
UBR1YGR184C HPC2Q01448 625 aa3.14□□□□□ -1.91
UBR1YGR184C PSD2P53037 1138 aaKnown RBP3.13□□□□□ -1.91
UBR1YGR184C YAH1Q12184 172 aaKnown RBP3.12□□□□□ -1.91
UBR1YGR184C SET1P38827 1080 aaKnown RBP3.12□□□□□ -1.91
UBR1YGR184C KIN1P13185 1064 aa3.1□□□□□ -1.91
UBR1YGR184C BBC1P47068 1157 aa3.1□□□□□ -1.91
UBR1YGR184C VPS70P47161 811 aa3.1□□□□□ -1.91
UBR1YGR184C SSA1P10591 642 aaKnown RBP3.09□□□□□ -1.92
UBR1YGR184C MAK11P20484 414 aaKnown RBP3.09□□□□□ -1.92
UBR1YGR184C SLD2P34252 453 aa3.09□□□□□ -1.92
UBR1YGR184C NOP7P53261 605 aaKnown RBP3.09□□□□□ -1.92
UBR1YGR184C PBS2P08018 668 aa3.08□□□□□ -1.92
UBR1YGR184C ORC1P54784 914 aaPredicted RBP3.08□□□□□ -1.92
UBR1YGR184C MAM3Q12296 706 aa3.08□□□□□ -1.92
UBR1YGR184C GEF1P37020 779 aa3.07□□□□□ -1.92
UBR1YGR184C REF2P42073 533 aaPredicted RBP3.07□□□□□ -1.92
UBR1YGR184C RAM2P29703 316 aa3.07□□□□□ -1.92
UBR1YGR184C SSA2P10592 639 aaKnown RBP3.06□□□□□ -1.92
UBR1YGR184C ABP1P15891 592 aaKnown RBP3.06□□□□□ -1.92
UBR1YGR184C YKR023WP36119 530 aaKnown RBP3.06□□□□□ -1.92
UBR1YGR184C ASF1P32447 279 aa3.05□□□□□ -1.92
UBR1YGR184C SNU71P53207 620 aaKnown RBP3.05□□□□□ -1.92
UBR1YGR184C AI2P03876 854 aa3.05□□□□□ -1.92
UBR1YGR184C CST9Q06032 482 aa3.05□□□□□ -1.92
UBR1YGR184C SIS2P36024 562 aa3.05□□□□□ -1.92
UBR1YGR184C YML020WQ03722 664 aa3.05□□□□□ -1.92
UBR1YGR184C TFC8Q12308 588 aa3.05□□□□□ -1.92
UBR1YGR184C BRL1P38770 471 aa3.04□□□□□ -1.92
UBR1YGR184C SSA4P22202 642 aaKnown RBP3.03□□□□□ -1.92
UBR1YGR184C TOP1P04786 769 aa3.03□□□□□ -1.93
UBR1YGR184C MRPL32P25348 183 aa3.03□□□□□ -1.93
UBR1YGR184C DOS2P54858 310 aa3.02□□□□□ -1.93
UBR1YGR184C RTG3P38165 486 aa3.02□□□□□ -1.93
UBR1YGR184C ATF2P53296 535 aa3.02□□□□□ -1.93
UBR1YGR184C SLX8P40072 274 aa3.01□□□□□ -1.93
UBR1YGR184C COX6P00427 148 aa3.01□□□□□ -1.93
UBR1YGR184C IES2P40154 320 aa3.01□□□□□ -1.93
UBR1YGR184C SVF1Q05515 481 aa3.01□□□□□ -1.93
UBR1YGR184C NUP42P49686 430 aaKnown RBP3.01□□□□□ -1.93
UBR1YGR184C HEM3P28789 327 aa3□□□□□ -1.93
UBR1YGR184C CLB5P30283 435 aa3□□□□□ -1.93
UBR1YGR184C TSR3Q12094 313 aaKnown RBP3□□□□□ -1.93
UBR1YGR184C GLC3P32775 704 aa2.99□□□□□ -1.93
UBR1YGR184C FPR4Q06205 392 aaPredicted RBP2.99□□□□□ -1.93
UBR1YGR184C FAP1P53971 965 aa2.99□□□□□ -1.93
UBR1YGR184C SUB2Q07478 446 aaKnown RBP2.99□□□□□ -1.93
UBR1YGR184C CDC3P32457 520 aaKnown RBP2.99□□□□□ -1.93
UBR1YGR184C CSE4P36012 229 aa2.99□□□□□ -1.93
UBR1YGR184C SPT5P27692 1063 aaKnown RBP2.99□□□□□ -1.93
UBR1YGR184C PSE1P32337 1089 aaKnown RBP2.99□□□□□ -1.93
UBR1YGR184C COQ8P27697 501 aa2.98□□□□□ -1.93
UBR1YGR184C MRX12P47084 519 aa2.98□□□□□ -1.93
UBR1YGR184C RPL34BP40525 121 aaKnown RBP2.97□□□□□ -1.93
UBR1YGR184C SEC20P28791 383 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms