Protein–RNA interactions for Protein: P08519

LPA, Apolipoprotein(a), humanhuman

Predictions only

Length 4,548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPAP08519 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC11.12□□□□□ -0.63
LPAP08519 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC11.12□□□□□ -0.63
LPAP08519 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 AC133561.1-201ENST00000568600 2415 ntBASIC11.12□□□□□ -0.63
LPAP08519 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC11.12□□□□□ -0.63
LPAP08519 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LPAP08519 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC11.12□□□□□ -0.63
LPAP08519 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC11.12□□□□□ -0.63
LPAP08519 FDX2-206ENST00000492239 773 ntTSL 2 BASIC11.12□□□□□ -0.63
LPAP08519 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
LPAP08519 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC11.12□□□□□ -0.63
LPAP08519 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.12□□□□□ -0.63
LPAP08519 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LPAP08519 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LPAP08519 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 TREX2-204ENST00000370212 861 ntTSL 5 BASIC11.11□□□□□ -0.63
LPAP08519 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LPAP08519 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LPAP08519 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 AC063952.2-201ENST00000498792 1227 ntBASIC11.11□□□□□ -0.63
LPAP08519 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
LPAP08519 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.11□□□□□ -0.63
LPAP08519 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
LPAP08519 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.11□□□□□ -0.63
LPAP08519 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.11□□□□□ -0.63
LPAP08519 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 B3GAT3P1-201ENST00000471720 806 ntBASIC11.11□□□□□ -0.63
LPAP08519 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC11.11□□□□□ -0.63
LPAP08519 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LPAP08519 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC11.1□□□□□ -0.63
LPAP08519 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 AL121829.2-201ENST00000620908 328 ntBASIC11.1□□□□□ -0.63
LPAP08519 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.1□□□□□ -0.63
LPAP08519 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.1□□□□□ -0.63
LPAP08519 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.1□□□□□ -0.63
LPAP08519 HCG4P8-203ENST00000443049 980 ntBASIC11.1□□□□□ -0.63
LPAP08519 AC008040.2-201ENST00000461049 708 ntBASIC11.1□□□□□ -0.63
LPAP08519 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC11.1□□□□□ -0.63
LPAP08519 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 AC005332.1-201ENST00000577698 1310 ntBASIC11.1□□□□□ -0.63
LPAP08519 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC11.1□□□□□ -0.63
LPAP08519 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.1□□□□□ -0.63
LPAP08519 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.1□□□□□ -0.63
LPAP08519 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LPAP08519 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LPAP08519 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.1□□□□□ -0.63
LPAP08519 AL138966.2-201ENST00000621997 464 ntBASIC11.1□□□□□ -0.63
LPAP08519 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC11.1□□□□□ -0.63
LPAP08519 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LPAP08519 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.09□□□□□ -0.63
LPAP08519 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms