RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 NISCHQ9Y2I1 1504 aa47.97■■■■■ 5.27
MAP1LC3A-201ENST00000360668 CCDC180Q9P1Z9 1646 aa41.95■■■■■ 4.31
MAP1LC3A-201ENST00000360668 ABCC9O60706 1549 aa40.55■■■■■ 4.08
MAP1LC3A-201ENST00000360668 ZCCHC6Q5VYS8 1495 aaKnown RBP40.27■■■■■ 4.04
MAP1LC3A-201ENST00000360668 DCAF1Q9Y4B6 1507 aa39.73■■■■□ 3.95
MAP1LC3A-201ENST00000360668 DCAF8L2P0C7V8 631 aa39.5■■■■□ 3.91
MAP1LC3A-201ENST00000360668 MYO15BQ96JP2 1530 aa39.34■■■■□ 3.89
MAP1LC3A-201ENST00000360668 NACADO15069 1562 aa39.1■■■■□ 3.85
MAP1LC3A-201ENST00000360668 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
MAP1LC3A-201ENST00000360668 RB1CC1Q8TDY2 1594 aa38.86■■■■□ 3.81
MAP1LC3A-201ENST00000360668 SCRIBQ14160 1630 aa38.45■■■■□ 3.75
MAP1LC3A-201ENST00000360668 UNC13AQ9UPW8 1703 aa37.96■■■■□ 3.67
MAP1LC3A-201ENST00000360668 PABPN1Q86U42 306 aaKnown RBP eCLIP37.93■■■■□ 3.66
MAP1LC3A-201ENST00000360668 BICRAQ9NZM4 1560 aa37.72■■■■□ 3.63
MAP1LC3A-201ENST00000360668 DNAJC5BQ9UF47 199 aa37.51■■■■□ 3.59
MAP1LC3A-201ENST00000360668 SUPT5HO00267 1087 aaKnown RBP37.33■■■■□ 3.57
MAP1LC3A-201ENST00000360668 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
MAP1LC3A-201ENST00000360668 RSF1Q96T23 1441 aaPredicted RBP37.12■■■■□ 3.53
MAP1LC3A-201ENST00000360668 BAZ1AQ9NRL2 1556 aaPredicted RBP37.06■■■■□ 3.52
MAP1LC3A-201ENST00000360668 MROH2BQ7Z745 1585 aa37.01■■■■□ 3.51
MAP1LC3A-201ENST00000360668 SMARCA4P51532 1647 aa36.9■■■■□ 3.5
MAP1LC3A-201ENST00000360668 EIF4G1Q04637 1599 aaKnown RBP36.74■■■■□ 3.47
MAP1LC3A-201ENST00000360668 WIZO95785 1651 aa36.69■■■■□ 3.46
MAP1LC3A-201ENST00000360668 CC2D2AQ9P2K1 1620 aa36.63■■■■□ 3.45
MAP1LC3A-201ENST00000360668 PEG3Q9GZU2 1588 aa36.5■■■■□ 3.43
MAP1LC3A-201ENST00000360668 TOP2AP11388 1531 aaKnown RBP36.37■■■■□ 3.41
MAP1LC3A-201ENST00000360668 SMARCA2P51531 1590 aa36.34■■■■□ 3.41
MAP1LC3A-201ENST00000360668 ATAD2BQ9ULI0 1458 aa36.32■■■■□ 3.41
MAP1LC3A-201ENST00000360668 BAZ1BQ9UIG0 1483 aaKnown RBP36.11■■■■□ 3.37
MAP1LC3A-201ENST00000360668 NCAPD3P42695 1498 aa36.07■■■■□ 3.36
MAP1LC3A-201ENST00000360668 HMGXB3Q12766 1538 aa36.03■■■■□ 3.36
MAP1LC3A-201ENST00000360668 CCDC88BA6NC98 1476 aa35.95■■■■□ 3.35
MAP1LC3A-201ENST00000360668 CHIC1Q5VXU3 224 aa35.71■■■■□ 3.31
MAP1LC3A-201ENST00000360668 CFTRP13569 1480 aa35.21■■■■□ 3.23
MAP1LC3A-201ENST00000360668 TRIM41Q8WV44 630 aa35.17■■■■□ 3.22
MAP1LC3A-201ENST00000360668 CADPSQ9ULU8 1353 aa35.12■■■■□ 3.21
MAP1LC3A-201ENST00000360668 ABCC8Q09428 1581 aa35.1■■■■□ 3.21
MAP1LC3A-201ENST00000360668 PRDM2Q13029 1718 aa35.06■■■■□ 3.2
MAP1LC3A-201ENST00000360668 NESP48681 1621 aa35.04■■■■□ 3.2
MAP1LC3A-201ENST00000360668 WRNQ14191 1432 aaPredicted RBP eCLIP34.95■■■■□ 3.19
MAP1LC3A-201ENST00000360668 ERCC6Q03468 1493 aa34.95■■■■□ 3.18
MAP1LC3A-201ENST00000360668 LAMC3Q9Y6N6 1575 aa34.88■■■■□ 3.17
MAP1LC3A-201ENST00000360668 SYNJ1O43426 1573 aa34.8■■■■□ 3.16
MAP1LC3A-201ENST00000360668 TOP2BQ02880 1626 aa34.71■■■■□ 3.15
MAP1LC3A-201ENST00000360668 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
MAP1LC3A-201ENST00000360668 PDS5BQ9NTI5 1447 aa34.69■■■■□ 3.14
MAP1LC3A-201ENST00000360668 BIVM-ERCC5R4GMW8 1640 aa34.69■■■■□ 3.14
MAP1LC3A-201ENST00000360668 CUX2O14529 1486 aa34.65■■■■□ 3.14
MAP1LC3A-201ENST00000360668 CUX1P39880 1505 aa34.63■■■■□ 3.13
MAP1LC3A-201ENST00000360668 CEP164Q9UPV0 1460 aa34.52■■■■□ 3.12
MAP1LC3A-201ENST00000360668 KIF21AQ7Z4S6 1674 aa34.51■■■■□ 3.11
MAP1LC3A-201ENST00000360668 THOC2Q8NI27 1593 aaKnown RBP34.48■■■■□ 3.11
MAP1LC3A-201ENST00000360668 FAM9AQ8IZU1 332 aaPredicted RBP34.43■■■■□ 3.1
MAP1LC3A-201ENST00000360668 EEA1Q15075 1411 aa34.43■■■■□ 3.1
MAP1LC3A-201ENST00000360668 SOGA1O94964 1423 aa34.42■■■■□ 3.1
MAP1LC3A-201ENST00000360668 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
MAP1LC3A-201ENST00000360668 TOPBP1Q92547 1522 aa34.33■■■■□ 3.09
MAP1LC3A-201ENST00000360668 MRC2Q9UBG0 1479 aa34.32■■■■□ 3.09
MAP1LC3A-201ENST00000360668 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
MAP1LC3A-201ENST00000360668 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
MAP1LC3A-201ENST00000360668 LOC105371045A0A1W2PR82 267 aa34.27■■■■□ 3.08
MAP1LC3A-201ENST00000360668 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
MAP1LC3A-201ENST00000360668 WDR62O43379 1518 aa34.21■■■■□ 3.07
MAP1LC3A-201ENST00000360668 CSRNP3Q8WYN3 585 aa34.18■■■■□ 3.06
MAP1LC3A-201ENST00000360668 POLA1P09884 1462 aaPredicted RBP34.14■■■■□ 3.06
MAP1LC3A-201ENST00000360668 KIF27Q86VH2 1401 aa34.09■■■■□ 3.05
MAP1LC3A-201ENST00000360668 ABCA10Q8WWZ4 1543 aa34■■■■□ 3.03
MAP1LC3A-201ENST00000360668 RAD54L2Q9Y4B4 1467 aa33.99■■■■□ 3.03
MAP1LC3A-201ENST00000360668 KIF21BO75037 1637 aa33.97■■■■□ 3.03
MAP1LC3A-201ENST00000360668 DNAJC5Q9H3Z4 198 aa33.92■■■■□ 3.02
MAP1LC3A-201ENST00000360668 WDR97A6NE52 1622 aa33.91■■■■□ 3.02
MAP1LC3A-201ENST00000360668 GOLGA3Q08378 1498 aa33.9■■■■□ 3.02
MAP1LC3A-201ENST00000360668 EHMT2Q96KQ7 1210 aa33.89■■■■□ 3.02
MAP1LC3A-201ENST00000360668 TARBP1Q13395 1621 aaKnown RBP33.84■■■■□ 3.01
MAP1LC3A-201ENST00000360668 PRXQ9BXM0 1461 aa33.83■■■■□ 3.01
MAP1LC3A-201ENST00000360668 IGF1RP08069 1367 aa33.79■■■■□ 3
MAP1LC3A-201ENST00000360668 ERICH3Q5RHP9 1530 aa33.78■■■■□ 3
MAP1LC3A-201ENST00000360668 TNIKQ9UKE5 1360 aa33.76■■■■□ 3
MAP1LC3A-201ENST00000360668 RAPGEF2Q9Y4G8 1499 aa33.74■■■□□ 2.99
MAP1LC3A-201ENST00000360668 ABCA5Q8WWZ7 1642 aa33.74■■■□□ 2.99
MAP1LC3A-201ENST00000360668 IFT140Q96RY7 1462 aa33.73■■■□□ 2.99
MAP1LC3A-201ENST00000360668 UBTFP17480 764 aaKnown RBP33.68■■■□□ 2.98
MAP1LC3A-201ENST00000360668 TDRD9Q8NDG6 1382 aaKnown RBP33.66■■■□□ 2.98
MAP1LC3A-201ENST00000360668 GAPVD1Q14C86 1478 aa33.65■■■□□ 2.98
MAP1LC3A-201ENST00000360668 CARMIL1Q5VZK9 1371 aa33.62■■■□□ 2.97
MAP1LC3A-201ENST00000360668 CUL7Q14999 1698 aa33.6■■■□□ 2.97
MAP1LC3A-201ENST00000360668 CEP162Q5TB80 1403 aa33.54■■■□□ 2.96
MAP1LC3A-201ENST00000360668 ZNF608Q9ULD9 1512 aaPredicted RBP33.52■■■□□ 2.96
MAP1LC3A-201ENST00000360668 PBRM1Q86U86 1689 aa33.49■■■□□ 2.95
MAP1LC3A-201ENST00000360668 AQRO60306 1485 aaKnown RBP eCLIP33.48■■■□□ 2.95
MAP1LC3A-201ENST00000360668 GRIN2BQ13224 1484 aa33.43■■■□□ 2.94
MAP1LC3A-201ENST00000360668 EIF4G3O43432 1585 aaKnown RBP33.4■■■□□ 2.94
MAP1LC3A-201ENST00000360668 CLIP1P30622 1438 aa33.33■■■□□ 2.93
MAP1LC3A-201ENST00000360668 FHAD1B1AJZ9 1412 aa33.31■■■□□ 2.92
MAP1LC3A-201ENST00000360668 ADAMTS12P58397 1594 aa33.3■■■□□ 2.92
MAP1LC3A-201ENST00000360668 OSCARQ8IYS5 282 aa33.26■■■□□ 2.92
MAP1LC3A-201ENST00000360668 SNAPC4Q5SXM2 1469 aa33.2■■■□□ 2.91
MAP1LC3A-201ENST00000360668 MAGI1Q96QZ7 1491 aaPredicted RBP33.19■■■□□ 2.9
MAP1LC3A-201ENST00000360668 CTTNBP2Q8WZ74 1663 aa33.18■■■□□ 2.9
MAP1LC3A-201ENST00000360668 RANGAP1P46060 587 aaPredicted RBP33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms