Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RBFOX3A6NFN3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 AP000997.3-201ENST00000623333 2250 ntBASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 AC241377.3-202ENST00000626088 1088 ntBASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 AC241585.3-202ENST00000628937 1088 ntBASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 AC245100.8-202ENST00000629247 1058 ntBASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RBFOX3A6NFN3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 AC104581.1-202ENST00000635932 2618 ntBASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 pRNA.6-201ENST00000610482 90 ntBASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 pRNA.5-201ENST00000612139 90 ntBASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 pRNA.11-201ENST00000618423 90 ntBASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 pRNA.13-201ENST00000619112 90 ntBASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms