Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.09□□□□□ -1.68e-6■■□□□ 11.6
PRPF8Q6P2Q9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.15e-14■■□□□ 11.6
PRPF8Q6P2Q9 SCAMP3-204ENST00000465312 715 ntTSL 515.36■□□□□ 0.054e-9■■□□□ 11.6
PRPF8Q6P2Q9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.084e-8■■□□□ 11.6
PRPF8Q6P2Q9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.314e-8■■□□□ 11.6
PRPF8Q6P2Q9 DSP-203ENST00000506617 754 ntTSL 312.46□□□□□ -0.419e-7■■□□□ 11.6
PRPF8Q6P2Q9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.424e-8■■□□□ 11.6
PRPF8Q6P2Q9 GSTA4-203ENST00000370963 1334 ntAPPRIS P1 TSL 1 (best)12.17□□□□□ -0.462e-6■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-222ENST00000550445 761 ntTSL 310.78□□□□□ -0.682e-8■■□□□ 11.6
PRPF8Q6P2Q9 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.772e-6■■□□□ 11.6
PRPF8Q6P2Q9 GSTA4-204ENST00000457564 379 ntTSL 210.24□□□□□ -0.772e-6■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-218ENST00000549445 759 ntTSL 39.77□□□□□ -0.852e-8■■□□□ 11.6
PRPF8Q6P2Q9 GSTA4-205ENST00000477599 1127 ntTSL 39.39□□□□□ -0.912e-6■■□□□ 11.6
PRPF8Q6P2Q9 EDA2R-201ENST00000253392 957 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.935e-6■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-208ENST00000547187 669 ntTSL 59.21□□□□□ -0.942e-8■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-211ENST00000548201 582 ntTSL 47.68□□□□□ -1.182e-8■■□□□ 11.6
PRPF8Q6P2Q9 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC7.36□□□□□ -1.232e-6■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-220ENST00000549966 538 ntTSL 57□□□□□ -1.292e-8■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-210ENST00000547832 640 ntTSL 36.33□□□□□ -1.42e-8■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-206ENST00000546914 521 ntTSL 46.13□□□□□ -1.432e-8■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-204ENST00000546796 556 ntTSL 56□□□□□ -1.452e-8■■□□□ 11.6
PRPF8Q6P2Q9 TMBIM6-226ENST00000552635 574 ntTSL 45.96□□□□□ -1.462e-8■■□□□ 11.6
PRPF8Q6P2Q9 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.585e-6■■□□□ 11.6
PRPF8Q6P2Q9 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.735e-6■■□□□ 11.6
PRPF8Q6P2Q9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.765e-6■■□□□ 11.6
PRPF8Q6P2Q9 NSMCE4A-208ENST00000477289 643 ntTSL 23.61□□□□□ -1.832e-7■■□□□ 11.6
PRPF8Q6P2Q9 NSMCE4A-203ENST00000459911 541 ntTSL 21.83□□□□□ -2.122e-7■■□□□ 11.6
PRPF8Q6P2Q9 DAPK3-204ENST00000594894 617 ntTSL 316.89■□□□□ 0.295e-9■■□□□ 11.6
PRPF8Q6P2Q9 DAPK3-205ENST00000595279 2058 ntTSL 216.09■□□□□ 0.175e-9■■□□□ 11.6
PRPF8Q6P2Q9 RAB5C-209ENST00000552162 551 ntTSL 414.47□□□□□ -0.097e-12■■□□□ 11.6
PRPF8Q6P2Q9 RAB5C-207ENST00000550504 583 ntTSL 38.38□□□□□ -1.077e-12■■□□□ 11.6
PRPF8Q6P2Q9 DLG5-205ENST00000466198 667 ntTSL 27.23□□□□□ -1.253e-8■■□□□ 11.6
PRPF8Q6P2Q9 C9orf3-217ENST00000479161 942 ntTSL 513.19□□□□□ -0.33e-7■■□□□ 11.6
PRPF8Q6P2Q9 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.2□□□□□ -0.623e-7■■□□□ 11.6
PRPF8Q6P2Q9 C9orf3-204ENST00000424143 1605 ntTSL 210.98□□□□□ -0.653e-7■■□□□ 11.6
PRPF8Q6P2Q9 C9orf3-206ENST00000428313 2288 ntTSL 1 (best)10.98□□□□□ -0.653e-7■■□□□ 11.6
PRPF8Q6P2Q9 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.883e-7■■□□□ 11.6
PRPF8Q6P2Q9 ZC3H7B-202ENST00000486331 5262 ntTSL 210.05□□□□□ -0.81e-6■■□□□ 11.6
PRPF8Q6P2Q9 DHRS1-206ENST00000559088 719 ntTSL 312.44□□□□□ -0.424e-6■■□□□ 11.6
PRPF8Q6P2Q9 DHRS1-209ENST00000561137 2660 ntTSL 28.2□□□□□ -1.14e-6■■□□□ 11.6
PRPF8Q6P2Q9 RBBP6-206ENST00000562683 529 ntTSL 2-0.22□□□□□ -2.443e-7■■□□□ 11.6
PRPF8Q6P2Q9 COPS9-202ENST00000403160 609 ntTSL 213.49□□□□□ -0.252e-8■■□□□ 11.6
PRPF8Q6P2Q9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.481e-6■■□□□ 11.6
PRPF8Q6P2Q9 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.38□□□□□ -0.591e-6■■□□□ 11.6
PRPF8Q6P2Q9 ANKRD11-210ENST00000566858 580 ntTSL 413.96□□□□□ -0.184e-10■■□□□ 11.6
PRPF8Q6P2Q9 ANKRD11-212ENST00000567699 412 ntTSL 513.11□□□□□ -0.314e-10■■□□□ 11.6
PRPF8Q6P2Q9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.16□□□□□ -0.464e-10■■□□□ 11.6
PRPF8Q6P2Q9 ANKRD11-213ENST00000567736 2750 ntTSL 211.49□□□□□ -0.574e-10■■□□□ 11.6
PRPF8Q6P2Q9 ANKRD11-207ENST00000562816 573 ntTSL 49.89□□□□□ -0.834e-10■■□□□ 11.6
PRPF8Q6P2Q9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.72□□□□□ -0.379e-7■■□□□ 11.6
PRPF8Q6P2Q9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.529e-7■■□□□ 11.6
PRPF8Q6P2Q9 CDK5RAP3-221ENST00000581662 557 ntTSL 27.44□□□□□ -1.228e-7■■□□□ 11.6
PRPF8Q6P2Q9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.23□□□□□ -0.453e-12■■□□□ 11.6
PRPF8Q6P2Q9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.53e-12■■□□□ 11.6
PRPF8Q6P2Q9 SLC39A13-206ENST00000527091 568 ntTSL 418.98■□□□□ 0.632e-7■■□□□ 11.6
PRPF8Q6P2Q9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.38■□□□□ 0.052e-7■■□□□ 11.6
PRPF8Q6P2Q9 SLC23A1-203ENST00000502863 583 ntTSL 313.08□□□□□ -0.321e-12■■□□□ 11.6
PRPF8Q6P2Q9 RPL8-214ENST00000534781 716 ntTSL 213.01□□□□□ -0.331e-9■■□□□ 11.6
PRPF8Q6P2Q9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.392e-7■■□□□ 11.6
PRPF8Q6P2Q9 FOXRED1-209ENST00000529802 580 ntTSL 212.22□□□□□ -0.452e-7■■□□□ 11.6
PRPF8Q6P2Q9 CALCOCO1-203ENST00000546443 1523 ntTSL 1 (best)11.82□□□□□ -0.521e-6■■□□□ 11.6
PRPF8Q6P2Q9 TTYH1-217ENST00000492920 757 ntTSL 210.38□□□□□ -0.751e-9■■□□□ 11.6
PRPF8Q6P2Q9 WDR97-204ENST00000529209 3079 ntTSL 1 (best)9.9□□□□□ -0.821e-9■■□□□ 11.6
PRPF8Q6P2Q9 SF3A1-203ENST00000444440 777 ntTSL 59.42□□□□□ -0.92e-6■■□□□ 11.6
PRPF8Q6P2Q9 WIPI1-208ENST00000590402 685 ntTSL 28.91□□□□□ -0.982e-7■■□□□ 11.6
PRPF8Q6P2Q9 WIPI1-203ENST00000585393 494 ntTSL 58.9□□□□□ -0.982e-7■■□□□ 11.6
PRPF8Q6P2Q9 PPIL2-210ENST00000496819 494 ntTSL 1 (best)7.79□□□□□ -1.162e-7■■□□□ 11.6
PRPF8Q6P2Q9 WIPI1-211ENST00000592645 624 ntTSL 37.07□□□□□ -1.282e-7■■□□□ 11.6
PRPF8Q6P2Q9 SF3A1-210ENST00000498259 875 ntTSL 26.65□□□□□ -1.352e-6■■□□□ 11.6
PRPF8Q6P2Q9 ERBB3-218ENST00000551176 277 ntTSL 1 (best)6.31□□□□□ -1.41e-9■■□□□ 11.6
PRPF8Q6P2Q9 WIPI1-210ENST00000591744 742 ntTSL 35.46□□□□□ -1.542e-7■■□□□ 11.6
PRPF8Q6P2Q9 PHF8-206ENST00000413386 580 ntTSL 33.18□□□□□ -1.91e-10■■□□□ 11.6
PRPF8Q6P2Q9 PHF8-213ENST00000448003 403 ntTSL 32.96□□□□□ -1.941e-10■■□□□ 11.6
PRPF8Q6P2Q9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.65□□□□□ -0.387e-7■■□□□ 11.6
PRPF8Q6P2Q9 SCLY-208ENST00000433750 660 ntTSL 212.99□□□□□ -0.332e-6■■□□□ 11.6
PRPF8Q6P2Q9 SCLY-214ENST00000463433 916 ntTSL 57.04□□□□□ -1.282e-6■■□□□ 11.6
PRPF8Q6P2Q9 CKB-206ENST00000553994 746 ntTSL 224.84■■□□□ 1.574e-7■■□□□ 11.6
PRPF8Q6P2Q9 CKB-216ENST00000557530 523 ntTSL 411.08□□□□□ -0.644e-7■■□□□ 11.6
PRPF8Q6P2Q9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.856e-8■■□□□ 11.6
PRPF8Q6P2Q9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.836e-8■■□□□ 11.6
PRPF8Q6P2Q9 MDK-209ENST00000489525 1339 ntTSL 520.21■□□□□ 0.836e-8■■□□□ 11.6
PRPF8Q6P2Q9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.736e-8■■□□□ 11.6
PRPF8Q6P2Q9 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.87■□□□□ 0.456e-8■■□□□ 11.6
PRPF8Q6P2Q9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.446e-8■■□□□ 11.6
PRPF8Q6P2Q9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.76■□□□□ 0.436e-8■■□□□ 11.6
PRPF8Q6P2Q9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.236e-8■■□□□ 11.6
PRPF8Q6P2Q9 MDK-211ENST00000533283 498 ntTSL 312.94□□□□□ -0.346e-8■■□□□ 11.6
PRPF8Q6P2Q9 UBAP2-211ENST00000488443 492 ntTSL 511.59□□□□□ -0.552e-6■■□□□ 11.6
PRPF8Q6P2Q9 PRMT5-225ENST00000557415 584 ntTSL 219.83■□□□□ 0.761e-7■■□□□ 11.6
PRPF8Q6P2Q9 PRMT5-216ENST00000554867 555 ntTSL 215.97■□□□□ 0.151e-7■■□□□ 11.6
PRPF8Q6P2Q9 PRMT5-217ENST00000554910 577 ntTSL 48.25□□□□□ -1.091e-7■■□□□ 11.6
PRPF8Q6P2Q9 PRMT5-208ENST00000553417 259 ntTSL 36.76□□□□□ -1.331e-7■■□□□ 11.6
PRPF8Q6P2Q9 PRMT5-223ENST00000556616 571 ntTSL 45.68□□□□□ -1.51e-7■■□□□ 11.6
PRPF8Q6P2Q9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.5■□□□□ 0.394e-7■■□□□ 11.6
PRPF8Q6P2Q9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.324e-7■■□□□ 11.6
PRPF8Q6P2Q9 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.54□□□□□ -0.564e-7■■□□□ 11.6
PRPF8Q6P2Q9 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC9.75□□□□□ -0.854e-7■■□□□ 11.6
PRPF8Q6P2Q9 DHPS-221ENST00000601537 1176 ntTSL 1 (best)9.62□□□□□ -0.874e-7■■□□□ 11.6
PRPF8Q6P2Q9 DHPS-222ENST00000601639 1133 ntTSL 58.38□□□□□ -1.074e-7■■□□□ 11.6
PRPF8Q6P2Q9 VWCE-206ENST00000538438 1076 ntTSL 313.79□□□□□ -0.23e-9■■□□□ 11.6
Retrieved 100 of 73,762 protein–RNA pairs in 891.8 ms