RNA–Protein interactions for RNA: ENST00000459911.5

NSMCE4A-203, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-203ENST00000459911 AEBP2Q6ZN18 517 aaPredicted RBP24.88■■□□□ 1.57
NSMCE4A-203ENST00000459911 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
NSMCE4A-203ENST00000459911 SENP3Q9H4L4 574 aaPredicted RBP21.42■■□□□ 1.02
NSMCE4A-203ENST00000459911 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
NSMCE4A-203ENST00000459911 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
NSMCE4A-203ENST00000459911 FOXD1Q16676 465 aa20.11■□□□□ 0.81
NSMCE4A-203ENST00000459911 MSH5O43196 834 aa19.25■□□□□ 0.67
NSMCE4A-203ENST00000459911 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
NSMCE4A-203ENST00000459911 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
NSMCE4A-203ENST00000459911 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
NSMCE4A-203ENST00000459911 ADRA2BP18089 450 aa18.19■□□□□ 0.5
NSMCE4A-203ENST00000459911 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
NSMCE4A-203ENST00000459911 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
NSMCE4A-203ENST00000459911 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
NSMCE4A-203ENST00000459911 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
NSMCE4A-203ENST00000459911 DCAF8L1A6NGE4 600 aa16.31■□□□□ 0.2
NSMCE4A-203ENST00000459911 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
NSMCE4A-203ENST00000459911 PPP4R3CPQ6ZMV5 832 aa16.24■□□□□ 0.19
NSMCE4A-203ENST00000459911 POTEHQ6S545 545 aa16.04■□□□□ 0.16
NSMCE4A-203ENST00000459911 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
NSMCE4A-203ENST00000459911 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
NSMCE4A-203ENST00000459911 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
NSMCE4A-203ENST00000459911 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
NSMCE4A-203ENST00000459911 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
NSMCE4A-203ENST00000459911 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
NSMCE4A-203ENST00000459911 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
NSMCE4A-203ENST00000459911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.023e-13■■■■■ 37.8
NSMCE4A-203ENST00000459911 KCNA4P22459 653 aa15.03■□□□□ -0
NSMCE4A-203ENST00000459911 DSG3P32926 999 aa14.91□□□□□ -0.02
NSMCE4A-203ENST00000459911 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
NSMCE4A-203ENST00000459911 CAPN15O75808 1086 aa14.8□□□□□ -0.04
NSMCE4A-203ENST00000459911 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
NSMCE4A-203ENST00000459911 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
NSMCE4A-203ENST00000459911 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
NSMCE4A-203ENST00000459911 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
NSMCE4A-203ENST00000459911 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
NSMCE4A-203ENST00000459911 ABCB7O75027 752 aa14.38□□□□□ -0.11
NSMCE4A-203ENST00000459911 APLP2Q06481 763 aa14.34□□□□□ -0.11
NSMCE4A-203ENST00000459911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
NSMCE4A-203ENST00000459911 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
NSMCE4A-203ENST00000459911 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
NSMCE4A-203ENST00000459911 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
NSMCE4A-203ENST00000459911 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
NSMCE4A-203ENST00000459911 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
NSMCE4A-203ENST00000459911 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
NSMCE4A-203ENST00000459911 POLA2Q14181 598 aa14.01□□□□□ -0.17
NSMCE4A-203ENST00000459911 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
NSMCE4A-203ENST00000459911 HAX1O00165 279 aa13.96□□□□□ -0.17
NSMCE4A-203ENST00000459911 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
NSMCE4A-203ENST00000459911 ZBTB22O15209 634 aa13.85□□□□□ -0.19
NSMCE4A-203ENST00000459911 PIP4P2Q8N4L2 257 aa13.82□□□□□ -0.2
NSMCE4A-203ENST00000459911 PLSCR2Q9NRY7 297 aa13.8□□□□□ -0.2
NSMCE4A-203ENST00000459911 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
NSMCE4A-203ENST00000459911 EVX2Q03828 476 aa13.64□□□□□ -0.23
NSMCE4A-203ENST00000459911 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
NSMCE4A-203ENST00000459911 LHX8Q68G74 356 aa13.61□□□□□ -0.23
NSMCE4A-203ENST00000459911 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
NSMCE4A-203ENST00000459911 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
NSMCE4A-203ENST00000459911 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
NSMCE4A-203ENST00000459911 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
NSMCE4A-203ENST00000459911 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
NSMCE4A-203ENST00000459911 FBLN2P98095 1184 aa13.3□□□□□ -0.28
NSMCE4A-203ENST00000459911 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
NSMCE4A-203ENST00000459911 GABBR2O75899 941 aa13.27□□□□□ -0.29
NSMCE4A-203ENST00000459911 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
NSMCE4A-203ENST00000459911 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
NSMCE4A-203ENST00000459911 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
NSMCE4A-203ENST00000459911 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
NSMCE4A-203ENST00000459911 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
NSMCE4A-203ENST00000459911 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
NSMCE4A-203ENST00000459911 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
NSMCE4A-203ENST00000459911 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
NSMCE4A-203ENST00000459911 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
NSMCE4A-203ENST00000459911 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
NSMCE4A-203ENST00000459911 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
NSMCE4A-203ENST00000459911 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
NSMCE4A-203ENST00000459911 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
NSMCE4A-203ENST00000459911 POTEMA6NI47 508 aa12.89□□□□□ -0.35
NSMCE4A-203ENST00000459911 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
NSMCE4A-203ENST00000459911 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
NSMCE4A-203ENST00000459911 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
NSMCE4A-203ENST00000459911 DCBLD2Q96PD2 775 aa12.72□□□□□ -0.37
NSMCE4A-203ENST00000459911 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
NSMCE4A-203ENST00000459911 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
NSMCE4A-203ENST00000459911 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
NSMCE4A-203ENST00000459911 CLCN6P51797 869 aa12.61□□□□□ -0.39
NSMCE4A-203ENST00000459911 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
NSMCE4A-203ENST00000459911 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
NSMCE4A-203ENST00000459911 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
NSMCE4A-203ENST00000459911 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
NSMCE4A-203ENST00000459911 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
NSMCE4A-203ENST00000459911 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
NSMCE4A-203ENST00000459911 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
NSMCE4A-203ENST00000459911 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
NSMCE4A-203ENST00000459911 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
NSMCE4A-203ENST00000459911 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
NSMCE4A-203ENST00000459911 LCE2DQ5TA82 110 aaPredicted RBP12.25□□□□□ -0.45
NSMCE4A-203ENST00000459911 PROM2Q8N271 834 aa12.24□□□□□ -0.45
NSMCE4A-203ENST00000459911 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
NSMCE4A-203ENST00000459911 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms