RNA–Protein interactions for RNA: ENST00000527091.1

SLC39A13-206, Transcript of solute carrier family 39 member 13, humanhuman

TSL 4

Gene SLC39A13, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A13-206ENST00000527091 NISCHQ9Y2I1 1504 aa54.65■■■■■ 6.34
SLC39A13-206ENST00000527091 CCDC180Q9P1Z9 1646 aa48.94■■■■■ 5.43
SLC39A13-206ENST00000527091 ABCC9O60706 1549 aa48.48■■■■■ 5.35
SLC39A13-206ENST00000527091 RB1CC1Q8TDY2 1594 aa46.35■■■■■ 5.01
SLC39A13-206ENST00000527091 NACADO15069 1562 aa46.11■■■■■ 4.97
SLC39A13-206ENST00000527091 DCAF8L2P0C7V8 631 aa45.83■■■■■ 4.93
SLC39A13-206ENST00000527091 MYO15BQ96JP2 1530 aa45.59■■■■■ 4.89
SLC39A13-206ENST00000527091 ZCCHC6Q5VYS8 1495 aaKnown RBP45.41■■■■■ 4.86
SLC39A13-206ENST00000527091 UNC13AQ9UPW8 1703 aa45.4■■■■■ 4.86
SLC39A13-206ENST00000527091 DCAF1Q9Y4B6 1507 aa45.17■■■■■ 4.82
SLC39A13-206ENST00000527091 PABPN1Q86U42 306 aaKnown RBP eCLIP45.13■■■■■ 4.82
SLC39A13-206ENST00000527091 DNAJC5BQ9UF47 199 aa45.04■■■■■ 4.8
SLC39A13-206ENST00000527091 BICRAQ9NZM4 1560 aa45■■■■■ 4.79
SLC39A13-206ENST00000527091 SCRIBQ14160 1630 aa44.61■■■■■ 4.73
SLC39A13-206ENST00000527091 SHROOM4Q9ULL8 1493 aa44.4■■■■■ 4.7
SLC39A13-206ENST00000527091 EIF4G1Q04637 1599 aaKnown RBP43.85■■■■■ 4.61
SLC39A13-206ENST00000527091 CC2D2AQ9P2K1 1620 aa43.84■■■■■ 4.61
SLC39A13-206ENST00000527091 CECR2Q9BXF3 1484 aa43.61■■■■■ 4.57
SLC39A13-206ENST00000527091 SMARCA4P51532 1647 aa42.6■■■■■ 4.41
SLC39A13-206ENST00000527091 NCAPD3P42695 1498 aa42.52■■■■■ 4.4
SLC39A13-206ENST00000527091 ATAD2BQ9ULI0 1458 aa42.47■■■■■ 4.39
SLC39A13-206ENST00000527091 BAZ1AQ9NRL2 1556 aaPredicted RBP42.41■■■■■ 4.38
SLC39A13-206ENST00000527091 SMARCA2P51531 1590 aa42.4■■■■■ 4.38
SLC39A13-206ENST00000527091 HMGXB3Q12766 1538 aa42.31■■■■■ 4.36
SLC39A13-206ENST00000527091 PEG3Q9GZU2 1588 aa42.16■■■■■ 4.34
SLC39A13-206ENST00000527091 MROH2BQ7Z745 1585 aa42.13■■■■■ 4.33
SLC39A13-206ENST00000527091 BAZ1BQ9UIG0 1483 aaKnown RBP42.1■■■■■ 4.33
SLC39A13-206ENST00000527091 ERCC6Q03468 1493 aa41.82■■■■■ 4.29
SLC39A13-206ENST00000527091 NESP48681 1621 aa41.77■■■■■ 4.28
SLC39A13-206ENST00000527091 WIZO95785 1651 aa41.68■■■■■ 4.26
SLC39A13-206ENST00000527091 CUX2O14529 1486 aa41.61■■■■■ 4.25
SLC39A13-206ENST00000527091 LAMC3Q9Y6N6 1575 aa41.56■■■■■ 4.24
SLC39A13-206ENST00000527091 RSF1Q96T23 1441 aaPredicted RBP41.36■■■■■ 4.21
SLC39A13-206ENST00000527091 THOC2Q8NI27 1593 aaKnown RBP41.33■■■■■ 4.21
SLC39A13-206ENST00000527091 KIF21AQ7Z4S6 1674 aa41.33■■■■■ 4.21
SLC39A13-206ENST00000527091 PDS5BQ9NTI5 1447 aa41.24■■■■■ 4.19
SLC39A13-206ENST00000527091 CADPSQ9ULU8 1353 aa41.23■■■■■ 4.19
SLC39A13-206ENST00000527091 TOP2AP11388 1531 aaKnown RBP41.17■■■■■ 4.18
SLC39A13-206ENST00000527091 DNAJC5Q9H3Z4 198 aa41.03■■■■■ 4.16
SLC39A13-206ENST00000527091 MRC2Q9UBG0 1479 aa40.9■■■■■ 4.14
SLC39A13-206ENST00000527091 CFTRP13569 1480 aa40.88■■■■■ 4.13
SLC39A13-206ENST00000527091 CEP164Q9UPV0 1460 aa40.83■■■■■ 4.13
SLC39A13-206ENST00000527091 WDR62O43379 1518 aa40.82■■■■■ 4.12
SLC39A13-206ENST00000527091 FANCD2Q9BXW9 1451 aa40.81■■■■■ 4.12
SLC39A13-206ENST00000527091 PRDM2Q13029 1718 aa40.65■■■■■ 4.1
SLC39A13-206ENST00000527091 CCDC88BA6NC98 1476 aa40.64■■■■■ 4.1
SLC39A13-206ENST00000527091 URB2Q14146 1524 aaKnown RBP40.47■■■■■ 4.07
SLC39A13-206ENST00000527091 TOPBP1Q92547 1522 aa40.1■■■■■ 4.01
SLC39A13-206ENST00000527091 DNMBPQ6XZF7 1577 aa40.01■■■■□ 3.99
SLC39A13-206ENST00000527091 ABCC8Q09428 1581 aa39.99■■■■□ 3.99
SLC39A13-206ENST00000527091 IFT140Q96RY7 1462 aa39.98■■■■□ 3.99
SLC39A13-206ENST00000527091 ZNF608Q9ULD9 1512 aaPredicted RBP39.89■■■■□ 3.98
SLC39A13-206ENST00000527091 SUPT5HO00267 1087 aaKnown RBP39.78■■■■□ 3.96
SLC39A13-206ENST00000527091 EIF4G3O43432 1585 aaKnown RBP39.76■■■■□ 3.95
SLC39A13-206ENST00000527091 TARBP1Q13395 1621 aaKnown RBP39.75■■■■□ 3.95
SLC39A13-206ENST00000527091 POLA1P09884 1462 aaPredicted RBP39.71■■■■□ 3.95
SLC39A13-206ENST00000527091 OSCARQ8IYS5 282 aa39.68■■■■□ 3.94
SLC39A13-206ENST00000527091 CUX1P39880 1505 aa39.56■■■■□ 3.92
SLC39A13-206ENST00000527091 AQRO60306 1485 aaKnown RBP eCLIP39.55■■■■□ 3.92
SLC39A13-206ENST00000527091 RAD54L2Q9Y4B4 1467 aa39.54■■■■□ 3.92
SLC39A13-206ENST00000527091 FGD5Q6ZNL6 1462 aa39.52■■■■□ 3.92
SLC39A13-206ENST00000527091 SOGA1O94964 1423 aa39.48■■■■□ 3.91
SLC39A13-206ENST00000527091 TRIM41Q8WV44 630 aa39.43■■■■□ 3.9
SLC39A13-206ENST00000527091 CHD1O14646 1710 aa39.41■■■■□ 3.9
SLC39A13-206ENST00000527091 WDR97A6NE52 1622 aa39.36■■■■□ 3.89
SLC39A13-206ENST00000527091 TDRD9Q8NDG6 1382 aaKnown RBP39.35■■■■□ 3.89
SLC39A13-206ENST00000527091 RIMBP3CA6NJZ7 1639 aa39.27■■■■□ 3.88
SLC39A13-206ENST00000527091 RIMBP3BA6NNM3 1639 aa39.27■■■■□ 3.88
SLC39A13-206ENST00000527091 RIMBP3Q9UFD9 1639 aa39.27■■■■□ 3.88
SLC39A13-206ENST00000527091 SNAPC4Q5SXM2 1469 aa39.2■■■■□ 3.87
SLC39A13-206ENST00000527091 ARHGEF11O15085 1522 aa39.16■■■■□ 3.86
SLC39A13-206ENST00000527091 FBLN2P98095 1184 aa39.16■■■■□ 3.86
SLC39A13-206ENST00000527091 GRIN2BQ13224 1484 aa39.13■■■■□ 3.85
SLC39A13-206ENST00000527091 PBRM1Q86U86 1689 aa39.12■■■■□ 3.85
SLC39A13-206ENST00000527091 MAGI1Q96QZ7 1491 aaPredicted RBP39.11■■■■□ 3.85
SLC39A13-206ENST00000527091 ABCA10Q8WWZ4 1543 aa39.09■■■■□ 3.85
SLC39A13-206ENST00000527091 BIVM-ERCC5R4GMW8 1640 aa39.08■■■■□ 3.85
SLC39A13-206ENST00000527091 TOP2BQ02880 1626 aa39.06■■■■□ 3.84
SLC39A13-206ENST00000527091 ABCA5Q8WWZ7 1642 aa39.06■■■■□ 3.84
SLC39A13-206ENST00000527091 GAPVD1Q14C86 1478 aa39.05■■■■□ 3.84
SLC39A13-206ENST00000527091 SYNJ1O43426 1573 aa39.04■■■■□ 3.84
SLC39A13-206ENST00000527091 WRNQ14191 1432 aaPredicted RBP eCLIP39.02■■■■□ 3.84
SLC39A13-206ENST00000527091 SYNJ2O15056 1496 aa38.96■■■■□ 3.83
SLC39A13-206ENST00000527091 CHMP7Q8WUX9 453 aaPredicted RBP38.93■■■■□ 3.82
SLC39A13-206ENST00000527091 CLASP1Q7Z460 1538 aa38.92■■■■□ 3.82
SLC39A13-206ENST00000527091 ARAP1Q96P48 1450 aa38.8■■■■□ 3.8
SLC39A13-206ENST00000527091 CYB5RLQ6IPT4 315 aa38.74■■■■□ 3.79
SLC39A13-206ENST00000527091 ADAMTS12P58397 1594 aa38.74■■■■□ 3.79
SLC39A13-206ENST00000527091 GRIN2AQ12879 1464 aa38.65■■■■□ 3.78
SLC39A13-206ENST00000527091 ERICH3Q5RHP9 1530 aa38.62■■■■□ 3.77
SLC39A13-206ENST00000527091 FHAD1B1AJZ9 1412 aa38.55■■■■□ 3.76
SLC39A13-206ENST00000527091 CEP170Q5SW79 1584 aa38.53■■■■□ 3.76
SLC39A13-206ENST00000527091 NUP160Q12769 1436 aa38.49■■■■□ 3.75
SLC39A13-206ENST00000527091 ERCC6L2Q5T890 1561 aa38.35■■■■□ 3.73
SLC39A13-206ENST00000527091 SHROOM2Q13796 1616 aa38.33■■■■□ 3.73
SLC39A13-206ENST00000527091 KIF27Q86VH2 1401 aa38.23■■■■□ 3.71
SLC39A13-206ENST00000527091 RUSC2Q8N2Y8 1516 aa38.19■■■■□ 3.7
SLC39A13-206ENST00000527091 CUL7Q14999 1698 aa38.18■■■■□ 3.7
SLC39A13-206ENST00000527091 TRHP20396 242 aaPredicted RBP38.18■■■■□ 3.7
SLC39A13-206ENST00000527091 IGF1RP08069 1367 aa38.15■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms