RNA–Protein interactions for RNA: ENST00000590402.1

WIPI1-208, Transcript of WD repeat domain, phosphoinositide interacting 1, humanhuman

TSL 2

Gene WIPI1, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI1-208ENST00000590402 NISCHQ9Y2I1 1504 aa25.77■■□□□ 1.72
WIPI1-208ENST00000590402 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
WIPI1-208ENST00000590402 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
WIPI1-208ENST00000590402 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
WIPI1-208ENST00000590402 ABCC9O60706 1549 aa22.62■■□□□ 1.21
WIPI1-208ENST00000590402 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
WIPI1-208ENST00000590402 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
WIPI1-208ENST00000590402 NACADO15069 1562 aa21.62■■□□□ 1.05
WIPI1-208ENST00000590402 ZCCHC6Q5VYS8 1495 aaKnown RBP21.44■■□□□ 1.02
WIPI1-208ENST00000590402 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
WIPI1-208ENST00000590402 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
WIPI1-208ENST00000590402 UNC13AQ9UPW8 1703 aa21.15■□□□□ 0.98
WIPI1-208ENST00000590402 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
WIPI1-208ENST00000590402 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
WIPI1-208ENST00000590402 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
WIPI1-208ENST00000590402 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
WIPI1-208ENST00000590402 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
WIPI1-208ENST00000590402 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
WIPI1-208ENST00000590402 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
WIPI1-208ENST00000590402 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
WIPI1-208ENST00000590402 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
WIPI1-208ENST00000590402 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
WIPI1-208ENST00000590402 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
WIPI1-208ENST00000590402 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
WIPI1-208ENST00000590402 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
WIPI1-208ENST00000590402 ATAD2BQ9ULI0 1458 aa19.95■□□□□ 0.78
WIPI1-208ENST00000590402 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
WIPI1-208ENST00000590402 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
WIPI1-208ENST00000590402 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
WIPI1-208ENST00000590402 PEG3Q9GZU2 1588 aa19.82■□□□□ 0.76
WIPI1-208ENST00000590402 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
WIPI1-208ENST00000590402 WIZO95785 1651 aa19.63■□□□□ 0.73
WIPI1-208ENST00000590402 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
WIPI1-208ENST00000590402 NESP48681 1621 aa19.52■□□□□ 0.72
WIPI1-208ENST00000590402 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
WIPI1-208ENST00000590402 LAMC3Q9Y6N6 1575 aa19.45■□□□□ 0.7
WIPI1-208ENST00000590402 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
WIPI1-208ENST00000590402 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
WIPI1-208ENST00000590402 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
WIPI1-208ENST00000590402 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
WIPI1-208ENST00000590402 CUX2O14529 1486 aa19.33■□□□□ 0.68
WIPI1-208ENST00000590402 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.67
WIPI1-208ENST00000590402 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
WIPI1-208ENST00000590402 CFTRP13569 1480 aa19.22■□□□□ 0.67
WIPI1-208ENST00000590402 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
WIPI1-208ENST00000590402 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
WIPI1-208ENST00000590402 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
WIPI1-208ENST00000590402 MRC2Q9UBG0 1479 aa19.15■□□□□ 0.66
WIPI1-208ENST00000590402 WDR62O43379 1518 aa19.07■□□□□ 0.64
WIPI1-208ENST00000590402 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
WIPI1-208ENST00000590402 SUPT5HO00267 1087 aaKnown RBP19.03■□□□□ 0.64
WIPI1-208ENST00000590402 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
WIPI1-208ENST00000590402 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
WIPI1-208ENST00000590402 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
WIPI1-208ENST00000590402 ABCC8Q09428 1581 aa18.83■□□□□ 0.6
WIPI1-208ENST00000590402 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
WIPI1-208ENST00000590402 IFT140Q96RY7 1462 aa18.75■□□□□ 0.59
WIPI1-208ENST00000590402 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
WIPI1-208ENST00000590402 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
WIPI1-208ENST00000590402 CUX1P39880 1505 aa18.64■□□□□ 0.57
WIPI1-208ENST00000590402 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
WIPI1-208ENST00000590402 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
WIPI1-208ENST00000590402 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
WIPI1-208ENST00000590402 SOGA1O94964 1423 aa18.59■□□□□ 0.57
WIPI1-208ENST00000590402 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.57
WIPI1-208ENST00000590402 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.56
WIPI1-208ENST00000590402 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
WIPI1-208ENST00000590402 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
WIPI1-208ENST00000590402 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
WIPI1-208ENST00000590402 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
WIPI1-208ENST00000590402 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
WIPI1-208ENST00000590402 SYNJ1O43426 1573 aa18.43■□□□□ 0.54
WIPI1-208ENST00000590402 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
WIPI1-208ENST00000590402 FOXD1Q16676 465 aa18.42■□□□□ 0.54
WIPI1-208ENST00000590402 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
WIPI1-208ENST00000590402 FBLN2P98095 1184 aa18.39■□□□□ 0.53
WIPI1-208ENST00000590402 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
WIPI1-208ENST00000590402 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.53
WIPI1-208ENST00000590402 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
WIPI1-208ENST00000590402 CHD1O14646 1710 aa18.37■□□□□ 0.53
WIPI1-208ENST00000590402 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
WIPI1-208ENST00000590402 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
WIPI1-208ENST00000590402 PBRM1Q86U86 1689 aa18.33■□□□□ 0.52
WIPI1-208ENST00000590402 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
WIPI1-208ENST00000590402 SYNJ2O15056 1496 aa18.28■□□□□ 0.52
WIPI1-208ENST00000590402 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
WIPI1-208ENST00000590402 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
WIPI1-208ENST00000590402 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
WIPI1-208ENST00000590402 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
WIPI1-208ENST00000590402 ARHGEF11O15085 1522 aa18.21■□□□□ 0.51
WIPI1-208ENST00000590402 ERICH3Q5RHP9 1530 aa18.19■□□□□ 0.5
WIPI1-208ENST00000590402 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
WIPI1-208ENST00000590402 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
WIPI1-208ENST00000590402 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
WIPI1-208ENST00000590402 ADRA2BP18089 450 aa18.16■□□□□ 0.5
WIPI1-208ENST00000590402 GRIN2AQ12879 1464 aa18.15■□□□□ 0.5
WIPI1-208ENST00000590402 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
WIPI1-208ENST00000590402 PPP6R1Q9UPN7 881 aa18.08■□□□□ 0.48
WIPI1-208ENST00000590402 CYB5RLQ6IPT4 315 aa18.07■□□□□ 0.48
WIPI1-208ENST00000590402 NUP160Q12769 1436 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms