RNA–Protein interactions for RNA: ENST00000395848.5

NCOR1-202, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best) BASIC

Gene NCOR1, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-202ENST00000395848 NISCHQ9Y2I1 1504 aa13.87□□□□□ -0.19
NCOR1-202ENST00000395848 CCDC180Q9P1Z9 1646 aa12.01□□□□□ -0.49
NCOR1-202ENST00000395848 DCAF8L2P0C7V8 631 aa11.73□□□□□ -0.53
NCOR1-202ENST00000395848 ZCCHC6Q5VYS8 1495 aaKnown RBP11.62□□□□□ -0.55
NCOR1-202ENST00000395848 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.57
NCOR1-202ENST00000395848 ABCC9O60706 1549 aa11.52□□□□□ -0.57
NCOR1-202ENST00000395848 DCAF1Q9Y4B6 1507 aa11.39□□□□□ -0.59
NCOR1-202ENST00000395848 MYO15BQ96JP2 1530 aa11.24□□□□□ -0.61
NCOR1-202ENST00000395848 NACADO15069 1562 aa11.23□□□□□ -0.61
NCOR1-202ENST00000395848 SCRIBQ14160 1630 aa11.17□□□□□ -0.62
NCOR1-202ENST00000395848 RB1CC1Q8TDY2 1594 aa11.16□□□□□ -0.62
NCOR1-202ENST00000395848 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
NCOR1-202ENST00000395848 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
NCOR1-202ENST00000395848 UNC13AQ9UPW8 1703 aa10.87□□□□□ -0.67
NCOR1-202ENST00000395848 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
NCOR1-202ENST00000395848 RSF1Q96T23 1441 aaPredicted RBP10.79□□□□□ -0.68
NCOR1-202ENST00000395848 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.69
NCOR1-202ENST00000395848 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
NCOR1-202ENST00000395848 BAZ1AQ9NRL2 1556 aaPredicted RBP10.72□□□□□ -0.69
NCOR1-202ENST00000395848 WIZO95785 1651 aa10.65□□□□□ -0.7
NCOR1-202ENST00000395848 SMARCA4P51532 1647 aa10.65□□□□□ -0.7
NCOR1-202ENST00000395848 CHIC1Q5VXU3 224 aa10.56□□□□□ -0.72
NCOR1-202ENST00000395848 TOP2AP11388 1531 aaKnown RBP10.51□□□□□ -0.73
NCOR1-202ENST00000395848 EIF4G1Q04637 1599 aaKnown RBP10.49□□□□□ -0.73
NCOR1-202ENST00000395848 ATAD2BQ9ULI0 1458 aa10.49□□□□□ -0.73
NCOR1-202ENST00000395848 SMARCA2P51531 1590 aa10.48□□□□□ -0.73
NCOR1-202ENST00000395848 BAZ1BQ9UIG0 1483 aaKnown RBP10.48□□□□□ -0.73
NCOR1-202ENST00000395848 PEG3Q9GZU2 1588 aa10.45□□□□□ -0.74
NCOR1-202ENST00000395848 CCDC88BA6NC98 1476 aa10.44□□□□□ -0.74
NCOR1-202ENST00000395848 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
NCOR1-202ENST00000395848 NCAPD3P42695 1498 aa10.38□□□□□ -0.75
NCOR1-202ENST00000395848 CC2D2AQ9P2K1 1620 aa10.34□□□□□ -0.75
NCOR1-202ENST00000395848 HMGXB3Q12766 1538 aa10.34□□□□□ -0.75
NCOR1-202ENST00000395848 FAM9AQ8IZU1 332 aaPredicted RBP10.3□□□□□ -0.76
NCOR1-202ENST00000395848 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
NCOR1-202ENST00000395848 LOC105371045A0A1W2PR82 267 aa10.22□□□□□ -0.77
NCOR1-202ENST00000395848 EHMT2Q96KQ7 1210 aa10.22□□□□□ -0.77
NCOR1-202ENST00000395848 WRNQ14191 1432 aaPredicted RBP eCLIP10.2□□□□□ -0.78
NCOR1-202ENST00000395848 CADPSQ9ULU8 1353 aa10.17□□□□□ -0.78
NCOR1-202ENST00000395848 CFTRP13569 1480 aa10.16□□□□□ -0.78
NCOR1-202ENST00000395848 DNAJC5BQ9UF47 199 aa10.14□□□□□ -0.79
NCOR1-202ENST00000395848 SYNJ1O43426 1573 aa10.1□□□□□ -0.79
NCOR1-202ENST00000395848 NESP48681 1621 aa10.08□□□□□ -0.8
NCOR1-202ENST00000395848 SOGA1O94964 1423 aa10.08□□□□□ -0.8
NCOR1-202ENST00000395848 CSRNP3Q8WYN3 585 aa10.06□□□□□ -0.8
NCOR1-202ENST00000395848 FANCD2Q9BXW9 1451 aa10.05□□□□□ -0.8
NCOR1-202ENST00000395848 PRDM2Q13029 1718 aa10.04□□□□□ -0.8
NCOR1-202ENST00000395848 TOP2BQ02880 1626 aa10.04□□□□□ -0.8
NCOR1-202ENST00000395848 EEA1Q15075 1411 aa10.03□□□□□ -0.8
NCOR1-202ENST00000395848 CUX1P39880 1505 aa10.03□□□□□ -0.8
NCOR1-202ENST00000395848 RUSC2Q8N2Y8 1516 aa10.03□□□□□ -0.8
NCOR1-202ENST00000395848 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
NCOR1-202ENST00000395848 UBTFP17480 764 aaKnown RBP10.02□□□□□ -0.81
NCOR1-202ENST00000395848 PDS5BQ9NTI5 1447 aa10.01□□□□□ -0.81
NCOR1-202ENST00000395848 BIVM-ERCC5R4GMW8 1640 aa10□□□□□ -0.81
NCOR1-202ENST00000395848 CEP164Q9UPV0 1460 aa9.99□□□□□ -0.81
NCOR1-202ENST00000395848 AEBP2Q6ZN18 517 aaPredicted RBP9.95□□□□□ -0.82
NCOR1-202ENST00000395848 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
NCOR1-202ENST00000395848 KIF27Q86VH2 1401 aa9.95□□□□□ -0.82
NCOR1-202ENST00000395848 CUX2O14529 1486 aa9.93□□□□□ -0.82
NCOR1-202ENST00000395848 TOPBP1Q92547 1522 aa9.93□□□□□ -0.82
NCOR1-202ENST00000395848 DNMBPQ6XZF7 1577 aa9.93□□□□□ -0.82
NCOR1-202ENST00000395848 GOLGA3Q08378 1498 aa9.92□□□□□ -0.82
NCOR1-202ENST00000395848 RANGAP1P46060 587 aaPredicted RBP9.92□□□□□ -0.82
NCOR1-202ENST00000395848 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.82
NCOR1-202ENST00000395848 ERCC6Q03468 1493 aa9.9□□□□□ -0.82
NCOR1-202ENST00000395848 URB2Q14146 1524 aaKnown RBP9.9□□□□□ -0.83
NCOR1-202ENST00000395848 RAD54L2Q9Y4B4 1467 aa9.89□□□□□ -0.83
NCOR1-202ENST00000395848 TNIKQ9UKE5 1360 aa9.89□□□□□ -0.83
NCOR1-202ENST00000395848 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
NCOR1-202ENST00000395848 RAPGEF2Q9Y4G8 1499 aa9.86□□□□□ -0.83
NCOR1-202ENST00000395848 KIF21BO75037 1637 aa9.86□□□□□ -0.83
NCOR1-202ENST00000395848 CEP162Q5TB80 1403 aa9.86□□□□□ -0.83
NCOR1-202ENST00000395848 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
NCOR1-202ENST00000395848 TDRD9Q8NDG6 1382 aaKnown RBP9.84□□□□□ -0.83
NCOR1-202ENST00000395848 IGF1RP08069 1367 aa9.83□□□□□ -0.84
NCOR1-202ENST00000395848 CARMIL1Q5VZK9 1371 aa9.82□□□□□ -0.84
NCOR1-202ENST00000395848 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
NCOR1-202ENST00000395848 PRXQ9BXM0 1461 aa9.82□□□□□ -0.84
NCOR1-202ENST00000395848 PPARGC1BQ86YN6 1023 aaKnown RBP9.81□□□□□ -0.84
NCOR1-202ENST00000395848 PCGF6Q9BYE7 350 aa9.81□□□□□ -0.84
NCOR1-202ENST00000395848 CLIP1P30622 1438 aa9.8□□□□□ -0.84
NCOR1-202ENST00000395848 ERICH3Q5RHP9 1530 aa9.79□□□□□ -0.84
NCOR1-202ENST00000395848 GAPVD1Q14C86 1478 aa9.77□□□□□ -0.84
NCOR1-202ENST00000395848 TTBK1Q5TCY1 1321 aaPredicted RBP9.77□□□□□ -0.85
NCOR1-202ENST00000395848 APLP2Q06481 763 aa9.75□□□□□ -0.85
NCOR1-202ENST00000395848 WDR62O43379 1518 aa9.75□□□□□ -0.85
NCOR1-202ENST00000395848 TRIM26Q12899 539 aaPredicted RBP9.74□□□□□ -0.85
NCOR1-202ENST00000395848 AQRO60306 1485 aaKnown RBP eCLIP9.74□□□□□ -0.855e-8■■■□□ 17.4
NCOR1-202ENST00000395848 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
NCOR1-202ENST00000395848 TARBP1Q13395 1621 aaKnown RBP9.72□□□□□ -0.85
NCOR1-202ENST00000395848 WDR97A6NE52 1622 aa9.72□□□□□ -0.85
NCOR1-202ENST00000395848 ABCA5Q8WWZ7 1642 aa9.71□□□□□ -0.86
NCOR1-202ENST00000395848 CUL7Q14999 1698 aa9.7□□□□□ -0.86
NCOR1-202ENST00000395848 ZNF608Q9ULD9 1512 aaPredicted RBP9.7□□□□□ -0.86
NCOR1-202ENST00000395848 THOC2Q8NI27 1593 aaKnown RBP9.7□□□□□ -0.86
NCOR1-202ENST00000395848 P3H3Q8IVL6 736 aa9.69□□□□□ -0.86
NCOR1-202ENST00000395848 FBLN2P98095 1184 aa9.68□□□□□ -0.86
NCOR1-202ENST00000395848 GRIN2BQ13224 1484 aa9.68□□□□□ -0.86
NCOR1-202ENST00000395848 VPS8Q8N3P4 1428 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms