RNA–Protein interactions for RNA: ENST00000553417.1

PRMT5-208, Transcript of protein arginine methyltransferase 5, humanhuman

TSL 3

Gene PRMT5, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRMT5-208ENST00000553417 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
PRMT5-208ENST00000553417 ABCC9O60706 1549 aa17.9■□□□□ 0.46
PRMT5-208ENST00000553417 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
PRMT5-208ENST00000553417 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
PRMT5-208ENST00000553417 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
PRMT5-208ENST00000553417 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
PRMT5-208ENST00000553417 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
PRMT5-208ENST00000553417 NACADO15069 1562 aa16.33■□□□□ 0.2
PRMT5-208ENST00000553417 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
PRMT5-208ENST00000553417 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
PRMT5-208ENST00000553417 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
PRMT5-208ENST00000553417 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
PRMT5-208ENST00000553417 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.17
PRMT5-208ENST00000553417 SHROOM4Q9ULL8 1493 aa15.9■□□□□ 0.14
PRMT5-208ENST00000553417 EIF4G1Q04637 1599 aaKnown RBP15.86■□□□□ 0.13
PRMT5-208ENST00000553417 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
PRMT5-208ENST00000553417 CUX2O14529 1486 aa15.75■□□□□ 0.11
PRMT5-208ENST00000553417 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
PRMT5-208ENST00000553417 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
PRMT5-208ENST00000553417 SCRIBQ14160 1630 aa15.56■□□□□ 0.08
PRMT5-208ENST00000553417 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
PRMT5-208ENST00000553417 ZCCHC6Q5VYS8 1495 aaKnown RBP15.26■□□□□ 0.03
PRMT5-208ENST00000553417 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
PRMT5-208ENST00000553417 NESP48681 1621 aa15.1■□□□□ 0.01
PRMT5-208ENST00000553417 NCAPD3P42695 1498 aa15.05■□□□□ -0
PRMT5-208ENST00000553417 SMARCA2P51531 1590 aa15.04■□□□□ -0
PRMT5-208ENST00000553417 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
PRMT5-208ENST00000553417 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
PRMT5-208ENST00000553417 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
PRMT5-208ENST00000553417 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
PRMT5-208ENST00000553417 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
PRMT5-208ENST00000553417 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
PRMT5-208ENST00000553417 KIF21AQ7Z4S6 1674 aa14.88□□□□□ -0.03
PRMT5-208ENST00000553417 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
PRMT5-208ENST00000553417 TRHP20396 242 aaPredicted RBP14.8□□□□□ -0.04
PRMT5-208ENST00000553417 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
PRMT5-208ENST00000553417 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.04
PRMT5-208ENST00000553417 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.04
PRMT5-208ENST00000553417 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.04
PRMT5-208ENST00000553417 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.04
PRMT5-208ENST00000553417 WDR62O43379 1518 aa14.72□□□□□ -0.05
PRMT5-208ENST00000553417 SMARCA4P51532 1647 aa14.71□□□□□ -0.05
PRMT5-208ENST00000553417 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
PRMT5-208ENST00000553417 CYB5RLQ6IPT4 315 aa14.63□□□□□ -0.07
PRMT5-208ENST00000553417 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
PRMT5-208ENST00000553417 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
PRMT5-208ENST00000553417 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.08
PRMT5-208ENST00000553417 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.09
PRMT5-208ENST00000553417 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
PRMT5-208ENST00000553417 ILDR1Q86SU0 546 aaPredicted RBP14.39□□□□□ -0.11
PRMT5-208ENST00000553417 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
PRMT5-208ENST00000553417 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
PRMT5-208ENST00000553417 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
PRMT5-208ENST00000553417 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
PRMT5-208ENST00000553417 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
PRMT5-208ENST00000553417 FBLN2P98095 1184 aa14.27□□□□□ -0.13
PRMT5-208ENST00000553417 CHD1O14646 1710 aa14.25□□□□□ -0.13
PRMT5-208ENST00000553417 CFTRP13569 1480 aa14.24□□□□□ -0.13
PRMT5-208ENST00000553417 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
PRMT5-208ENST00000553417 WIZO95785 1651 aa14.12□□□□□ -0.15
PRMT5-208ENST00000553417 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.153e-7■■■■■ 37.9
PRMT5-208ENST00000553417 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
PRMT5-208ENST00000553417 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
PRMT5-208ENST00000553417 SYNJ1O43426 1573 aa14.04□□□□□ -0.16
PRMT5-208ENST00000553417 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
PRMT5-208ENST00000553417 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
PRMT5-208ENST00000553417 ABCC8Q09428 1581 aa14□□□□□ -0.17
PRMT5-208ENST00000553417 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
PRMT5-208ENST00000553417 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
PRMT5-208ENST00000553417 SNAPC4Q5SXM2 1469 aa13.96□□□□□ -0.17
PRMT5-208ENST00000553417 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.18
PRMT5-208ENST00000553417 KDM4FA0A1W2PPD8 638 aa13.93□□□□□ -0.18
PRMT5-208ENST00000553417 TOP2AP11388 1531 aaKnown RBP13.91□□□□□ -0.18
PRMT5-208ENST00000553417 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
PRMT5-208ENST00000553417 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
PRMT5-208ENST00000553417 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
PRMT5-208ENST00000553417 KIF13AQ9H1H9 1805 aa13.85□□□□□ -0.19
PRMT5-208ENST00000553417 SYNJ2O15056 1496 aa13.84□□□□□ -0.19
PRMT5-208ENST00000553417 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
PRMT5-208ENST00000553417 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.19
PRMT5-208ENST00000553417 SOGA1O94964 1423 aa13.81□□□□□ -0.2
PRMT5-208ENST00000553417 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
PRMT5-208ENST00000553417 KDM6BO15054 1643 aa13.8□□□□□ -0.2
PRMT5-208ENST00000553417 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
PRMT5-208ENST00000553417 FAM69CQ0P6D2 419 aa13.79□□□□□ -0.2
PRMT5-208ENST00000553417 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
PRMT5-208ENST00000553417 HECW2Q9P2P5 1572 aa13.77□□□□□ -0.21
PRMT5-208ENST00000553417 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
PRMT5-208ENST00000553417 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
PRMT5-208ENST00000553417 ADGRL1O94910 1474 aa13.71□□□□□ -0.21
PRMT5-208ENST00000553417 ABCC10Q5T3U5 1492 aa13.71□□□□□ -0.21
PRMT5-208ENST00000553417 FGD5Q6ZNL6 1462 aa13.69□□□□□ -0.22
PRMT5-208ENST00000553417 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRMT5-208ENST00000553417 CEP170Q5SW79 1584 aa13.69□□□□□ -0.22
PRMT5-208ENST00000553417 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
PRMT5-208ENST00000553417 DIP2BQ9P265 1576 aa13.65□□□□□ -0.22
PRMT5-208ENST00000553417 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
PRMT5-208ENST00000553417 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
PRMT5-208ENST00000553417 MAPKBP1O60336 1514 aa13.61□□□□□ -0.23
PRMT5-208ENST00000553417 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms