RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 NISCHQ9Y2I1 1504 aa18.74■□□□□ 0.59
ERBB3-218ENST00000551176 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
ERBB3-218ENST00000551176 ABCC9O60706 1549 aa16.44■□□□□ 0.22
ERBB3-218ENST00000551176 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
ERBB3-218ENST00000551176 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
ERBB3-218ENST00000551176 NACADO15069 1562 aa15.68■□□□□ 0.1
ERBB3-218ENST00000551176 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
ERBB3-218ENST00000551176 MYO15BQ96JP2 1530 aa15.57■□□□□ 0.08
ERBB3-218ENST00000551176 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
ERBB3-218ENST00000551176 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
ERBB3-218ENST00000551176 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
ERBB3-218ENST00000551176 BICRAQ9NZM4 1560 aa15.3■□□□□ 0.04
ERBB3-218ENST00000551176 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
ERBB3-218ENST00000551176 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
ERBB3-218ENST00000551176 SHROOM4Q9ULL8 1493 aa15.06■□□□□ 0
ERBB3-218ENST00000551176 EIF4G1Q04637 1599 aaKnown RBP14.88□□□□□ -0.03
ERBB3-218ENST00000551176 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.04
ERBB3-218ENST00000551176 AEBP2Q6ZN18 517 aaPredicted RBP14.77□□□□□ -0.05
ERBB3-218ENST00000551176 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
ERBB3-218ENST00000551176 CHIC1Q5VXU3 224 aa14.54□□□□□ -0.08
ERBB3-218ENST00000551176 SMARCA4P51532 1647 aa14.53□□□□□ -0.08
ERBB3-218ENST00000551176 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
ERBB3-218ENST00000551176 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
ERBB3-218ENST00000551176 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
ERBB3-218ENST00000551176 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
ERBB3-218ENST00000551176 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
ERBB3-218ENST00000551176 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
ERBB3-218ENST00000551176 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
ERBB3-218ENST00000551176 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
ERBB3-218ENST00000551176 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-218ENST00000551176 WIZO95785 1651 aa14.27□□□□□ -0.12
ERBB3-218ENST00000551176 NESP48681 1621 aa14.23□□□□□ -0.13
ERBB3-218ENST00000551176 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
ERBB3-218ENST00000551176 TOP2AP11388 1531 aaKnown RBP14.11□□□□□ -0.15
ERBB3-218ENST00000551176 LAMC3Q9Y6N6 1575 aa14.09□□□□□ -0.15
ERBB3-218ENST00000551176 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
ERBB3-218ENST00000551176 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.16
ERBB3-218ENST00000551176 CUX2O14529 1486 aa14□□□□□ -0.17
ERBB3-218ENST00000551176 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
ERBB3-218ENST00000551176 CFTRP13569 1480 aa13.99□□□□□ -0.17
ERBB3-218ENST00000551176 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
ERBB3-218ENST00000551176 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
ERBB3-218ENST00000551176 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
ERBB3-218ENST00000551176 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
ERBB3-218ENST00000551176 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
ERBB3-218ENST00000551176 WDR62O43379 1518 aa13.85□□□□□ -0.19
ERBB3-218ENST00000551176 SUPT5HO00267 1087 aaKnown RBP13.84□□□□□ -0.19
ERBB3-218ENST00000551176 URB2Q14146 1524 aaKnown RBP13.81□□□□□ -0.2
ERBB3-218ENST00000551176 PRDM2Q13029 1718 aa13.74□□□□□ -0.21
ERBB3-218ENST00000551176 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
ERBB3-218ENST00000551176 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
ERBB3-218ENST00000551176 DNMBPQ6XZF7 1577 aa13.63□□□□□ -0.23
ERBB3-218ENST00000551176 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
ERBB3-218ENST00000551176 ZNF608Q9ULD9 1512 aaPredicted RBP13.61□□□□□ -0.23
ERBB3-218ENST00000551176 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
ERBB3-218ENST00000551176 CUX1P39880 1505 aa13.58□□□□□ -0.24
ERBB3-218ENST00000551176 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
ERBB3-218ENST00000551176 TARBP1Q13395 1621 aaKnown RBP13.54□□□□□ -0.24
ERBB3-218ENST00000551176 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
ERBB3-218ENST00000551176 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
ERBB3-218ENST00000551176 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.253e-6■□□□□ 10.2
ERBB3-218ENST00000551176 SOGA1O94964 1423 aa13.51□□□□□ -0.25
ERBB3-218ENST00000551176 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
ERBB3-218ENST00000551176 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
ERBB3-218ENST00000551176 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
ERBB3-218ENST00000551176 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
ERBB3-218ENST00000551176 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
ERBB3-218ENST00000551176 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
ERBB3-218ENST00000551176 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
ERBB3-218ENST00000551176 WDR97A6NE52 1622 aa13.37□□□□□ -0.27
ERBB3-218ENST00000551176 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
ERBB3-218ENST00000551176 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
ERBB3-218ENST00000551176 GRIN2BQ13224 1484 aa13.35□□□□□ -0.27
ERBB3-218ENST00000551176 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
ERBB3-218ENST00000551176 FBLN2P98095 1184 aa13.33□□□□□ -0.28
ERBB3-218ENST00000551176 ABCA5Q8WWZ7 1642 aa13.32□□□□□ -0.28
ERBB3-218ENST00000551176 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
ERBB3-218ENST00000551176 CHD1O14646 1710 aa13.3□□□□□ -0.28
ERBB3-218ENST00000551176 CHMP7Q8WUX9 453 aaPredicted RBP13.27□□□□□ -0.29
ERBB3-218ENST00000551176 SYNJ2O15056 1496 aa13.27□□□□□ -0.29
ERBB3-218ENST00000551176 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
ERBB3-218ENST00000551176 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
ERBB3-218ENST00000551176 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
ERBB3-218ENST00000551176 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.29
ERBB3-218ENST00000551176 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.29
ERBB3-218ENST00000551176 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.29
ERBB3-218ENST00000551176 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
ERBB3-218ENST00000551176 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
ERBB3-218ENST00000551176 ERICH3Q5RHP9 1530 aa13.19□□□□□ -0.3
ERBB3-218ENST00000551176 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
ERBB3-218ENST00000551176 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
ERBB3-218ENST00000551176 IGF1RP08069 1367 aa13.16□□□□□ -0.3
ERBB3-218ENST00000551176 NUP160Q12769 1436 aa13.14□□□□□ -0.31
ERBB3-218ENST00000551176 ARAP1Q96P48 1450 aa13.14□□□□□ -0.31
ERBB3-218ENST00000551176 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
ERBB3-218ENST00000551176 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
ERBB3-218ENST00000551176 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
ERBB3-218ENST00000551176 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.32
ERBB3-218ENST00000551176 ERCC6L2Q5T890 1561 aa13.06□□□□□ -0.32
ERBB3-218ENST00000551176 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms