RNA–Protein interactions for RNA: ENST00000529802.1

FOXRED1-209, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-209ENST00000529802 NISCHQ9Y2I1 1504 aa34.98■■■■□ 3.19
FOXRED1-209ENST00000529802 ABCC9O60706 1549 aa32.17■■■□□ 2.74
FOXRED1-209ENST00000529802 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
FOXRED1-209ENST00000529802 DNAJC5BQ9UF47 199 aa30.62■■■□□ 2.49
FOXRED1-209ENST00000529802 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
FOXRED1-209ENST00000529802 NACADO15069 1562 aa30.02■■■□□ 2.4
FOXRED1-209ENST00000529802 PABPN1Q86U42 306 aaKnown RBP eCLIP29.81■■■□□ 2.36
FOXRED1-209ENST00000529802 UNC13AQ9UPW8 1703 aa29.77■■■□□ 2.36
FOXRED1-209ENST00000529802 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
FOXRED1-209ENST00000529802 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
FOXRED1-209ENST00000529802 MYO15BQ96JP2 1530 aa29.42■■■□□ 2.3
FOXRED1-209ENST00000529802 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
FOXRED1-209ENST00000529802 SHROOM4Q9ULL8 1493 aa29.05■■■□□ 2.24
FOXRED1-209ENST00000529802 CECR2Q9BXF3 1484 aa29.02■■■□□ 2.24
FOXRED1-209ENST00000529802 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
FOXRED1-209ENST00000529802 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
FOXRED1-209ENST00000529802 DCAF1Q9Y4B6 1507 aa28.85■■■□□ 2.21
FOXRED1-209ENST00000529802 SCRIBQ14160 1630 aa28.84■■■□□ 2.21
FOXRED1-209ENST00000529802 DNAJC5Q9H3Z4 198 aa28.45■■■□□ 2.14
FOXRED1-209ENST00000529802 CUX2O14529 1486 aa27.94■■■□□ 2.06
FOXRED1-209ENST00000529802 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
FOXRED1-209ENST00000529802 NCAPD3P42695 1498 aa27.7■■■□□ 2.02
FOXRED1-209ENST00000529802 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
FOXRED1-209ENST00000529802 NESP48681 1621 aa27.51■■□□□ 1.99
FOXRED1-209ENST00000529802 HMGXB3Q12766 1538 aa27.51■■□□□ 1.99
FOXRED1-209ENST00000529802 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
FOXRED1-209ENST00000529802 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
FOXRED1-209ENST00000529802 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.97
FOXRED1-209ENST00000529802 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
FOXRED1-209ENST00000529802 LAMC3Q9Y6N6 1575 aa27.2■■□□□ 1.94
FOXRED1-209ENST00000529802 BAZ1AQ9NRL2 1556 aaPredicted RBP27.19■■□□□ 1.94
FOXRED1-209ENST00000529802 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
FOXRED1-209ENST00000529802 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
FOXRED1-209ENST00000529802 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
FOXRED1-209ENST00000529802 TRIM41Q8WV44 630 aa27■■□□□ 1.91
FOXRED1-209ENST00000529802 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
FOXRED1-209ENST00000529802 MRC2Q9UBG0 1479 aa26.86■■□□□ 1.89
FOXRED1-209ENST00000529802 WDR62O43379 1518 aa26.85■■□□□ 1.89
FOXRED1-209ENST00000529802 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
FOXRED1-209ENST00000529802 WIZO95785 1651 aa26.65■■□□□ 1.86
FOXRED1-209ENST00000529802 CEP164Q9UPV0 1460 aa26.64■■□□□ 1.86
FOXRED1-209ENST00000529802 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
FOXRED1-209ENST00000529802 OSCARQ8IYS5 282 aa26.45■■□□□ 1.82
FOXRED1-209ENST00000529802 CFTRP13569 1480 aa26.43■■□□□ 1.82
FOXRED1-209ENST00000529802 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
FOXRED1-209ENST00000529802 RIMBP3CA6NJZ7 1639 aa26.33■■□□□ 1.81
FOXRED1-209ENST00000529802 RIMBP3BA6NNM3 1639 aa26.33■■□□□ 1.81
FOXRED1-209ENST00000529802 RIMBP3Q9UFD9 1639 aa26.33■■□□□ 1.81
FOXRED1-209ENST00000529802 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
FOXRED1-209ENST00000529802 PRDM2Q13029 1718 aa26.2■■□□□ 1.79
FOXRED1-209ENST00000529802 ARHGEF11O15085 1522 aa26.18■■□□□ 1.78
FOXRED1-209ENST00000529802 RSF1Q96T23 1441 aaPredicted RBP26.17■■□□□ 1.78
FOXRED1-209ENST00000529802 ZNF608Q9ULD9 1512 aaPredicted RBP26.17■■□□□ 1.78
FOXRED1-209ENST00000529802 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
FOXRED1-209ENST00000529802 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
FOXRED1-209ENST00000529802 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
FOXRED1-209ENST00000529802 CHD1O14646 1710 aa25.94■■□□□ 1.74
FOXRED1-209ENST00000529802 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
FOXRED1-209ENST00000529802 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
FOXRED1-209ENST00000529802 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
FOXRED1-209ENST00000529802 DNMBPQ6XZF7 1577 aa25.88■■□□□ 1.73
FOXRED1-209ENST00000529802 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
FOXRED1-209ENST00000529802 ABCC8Q09428 1581 aa25.83■■□□□ 1.73
FOXRED1-209ENST00000529802 AQRO60306 1485 aaKnown RBP eCLIP25.82■■□□□ 1.72
FOXRED1-209ENST00000529802 TRHP20396 242 aaPredicted RBP25.78■■□□□ 1.72
FOXRED1-209ENST00000529802 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
FOXRED1-209ENST00000529802 FBLN2P98095 1184 aa25.69■■□□□ 1.7
FOXRED1-209ENST00000529802 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
FOXRED1-209ENST00000529802 RAD54L2Q9Y4B4 1467 aa25.62■■□□□ 1.69
FOXRED1-209ENST00000529802 SNAPC4Q5SXM2 1469 aa25.59■■□□□ 1.69
FOXRED1-209ENST00000529802 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
FOXRED1-209ENST00000529802 SOGA1O94964 1423 aa25.52■■□□□ 1.68
FOXRED1-209ENST00000529802 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
FOXRED1-209ENST00000529802 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
FOXRED1-209ENST00000529802 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
FOXRED1-209ENST00000529802 MAGI1Q96QZ7 1491 aaPredicted RBP25.46■■□□□ 1.67
FOXRED1-209ENST00000529802 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
FOXRED1-209ENST00000529802 CHMP7Q8WUX9 453 aaPredicted RBP25.4■■□□□ 1.66
FOXRED1-209ENST00000529802 GRIN2BQ13224 1484 aa25.39■■□□□ 1.65
FOXRED1-209ENST00000529802 CUX1P39880 1505 aa25.38■■□□□ 1.65
FOXRED1-209ENST00000529802 SYNJ2O15056 1496 aa25.38■■□□□ 1.65
FOXRED1-209ENST00000529802 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
FOXRED1-209ENST00000529802 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
FOXRED1-209ENST00000529802 ABCA5Q8WWZ7 1642 aa25.22■■□□□ 1.63
FOXRED1-209ENST00000529802 ERCC6L2Q5T890 1561 aa25.2■■□□□ 1.62
FOXRED1-209ENST00000529802 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.62
FOXRED1-209ENST00000529802 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
FOXRED1-209ENST00000529802 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
FOXRED1-209ENST00000529802 CEP170Q5SW79 1584 aa25.08■■□□□ 1.61
FOXRED1-209ENST00000529802 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
FOXRED1-209ENST00000529802 NUP160Q12769 1436 aa25.03■■□□□ 1.6
FOXRED1-209ENST00000529802 SHROOM2Q13796 1616 aa25.02■■□□□ 1.6
FOXRED1-209ENST00000529802 KIF13AQ9H1H9 1805 aa25■■□□□ 1.59
FOXRED1-209ENST00000529802 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
FOXRED1-209ENST00000529802 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
FOXRED1-209ENST00000529802 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
FOXRED1-209ENST00000529802 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
FOXRED1-209ENST00000529802 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
FOXRED1-209ENST00000529802 PRG4Q92954 1404 aaPredicted RBP24.79■■□□□ 1.56
FOXRED1-209ENST00000529802 ABCC10Q5T3U5 1492 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms