Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETP07949 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETP07949 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETP07949 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETP07949 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.27■□□□□ 0.84
RETP07949 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.27■□□□□ 0.84
RETP07949 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.27■□□□□ 0.84
RETP07949 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.27■□□□□ 0.84
RETP07949 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.27■□□□□ 0.84
RETP07949 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RETP07949 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RETP07949 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RETP07949 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RETP07949 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.26■□□□□ 0.83
RETP07949 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.26■□□□□ 0.83
RETP07949 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.26■□□□□ 0.83
RETP07949 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.26■□□□□ 0.83
RETP07949 AF186192.3-201ENST00000583427 947 ntBASIC20.26■□□□□ 0.83
RETP07949 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.26■□□□□ 0.83
RETP07949 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.26■□□□□ 0.83
RETP07949 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.26■□□□□ 0.83
RETP07949 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.26■□□□□ 0.83
RETP07949 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.26■□□□□ 0.83
RETP07949 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.26■□□□□ 0.83
RETP07949 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETP07949 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETP07949 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETP07949 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETP07949 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RETP07949 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETP07949 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RETP07949 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RETP07949 AL353807.1-201ENST00000427475 662 ntBASIC20.25■□□□□ 0.83
RETP07949 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.25■□□□□ 0.83
RETP07949 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.25■□□□□ 0.83
RETP07949 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETP07949 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RETP07949 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETP07949 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.25■□□□□ 0.83
RETP07949 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.25■□□□□ 0.83
RETP07949 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.25■□□□□ 0.83
RETP07949 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RETP07949 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RETP07949 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RETP07949 AC113347.1-201ENST00000413321 391 ntBASIC20.24■□□□□ 0.83
RETP07949 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RETP07949 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.24■□□□□ 0.83
RETP07949 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.24■□□□□ 0.83
RETP07949 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.24■□□□□ 0.83
RETP07949 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RETP07949 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.24■□□□□ 0.83
RETP07949 FEM1AP4-201ENST00000443167 1987 ntBASIC20.24■□□□□ 0.83
RETP07949 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RETP07949 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 HTR7P1-201ENST00000538670 1336 ntBASIC20.24■□□□□ 0.83
RETP07949 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RETP07949 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RETP07949 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RETP07949 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.23■□□□□ 0.83
RETP07949 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.23■□□□□ 0.83
RETP07949 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.23■□□□□ 0.83
RETP07949 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETP07949 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RETP07949 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETP07949 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETP07949 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RETP07949 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.22■□□□□ 0.83
RETP07949 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.22■□□□□ 0.83
RETP07949 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RETP07949 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RETP07949 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.22■□□□□ 0.83
RETP07949 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.22■□□□□ 0.83
RETP07949 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETP07949 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RETP07949 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.22■□□□□ 0.83
RETP07949 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms