RNA–Protein interactions for RNA: ENST00000618057.4

ITGBL1-206, Transcript of integrin subunit beta like 1, humanhuman

TSL 1 (best) BASIC

Gene ITGBL1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGBL1-206ENST00000618057 NISCHQ9Y2I1 1504 aa43.09■■■■■ 4.49
ITGBL1-206ENST00000618057 SHROOM4Q9ULL8 1493 aa37.05■■■■□ 3.52
ITGBL1-206ENST00000618057 CCDC180Q9P1Z9 1646 aa36.49■■■■□ 3.43
ITGBL1-206ENST00000618057 ZCCHC6Q5VYS8 1495 aaKnown RBP36.43■■■■□ 3.42
ITGBL1-206ENST00000618057 SUPT5HO00267 1087 aaKnown RBP36.31■■■■□ 3.4
ITGBL1-206ENST00000618057 DCAF8L2P0C7V8 631 aa36.01■■■■□ 3.35
ITGBL1-206ENST00000618057 CHIC1Q5VXU3 224 aa35.21■■■■□ 3.23
ITGBL1-206ENST00000618057 DCAF1Q9Y4B6 1507 aa35.19■■■■□ 3.22
ITGBL1-206ENST00000618057 MYO15BQ96JP2 1530 aa35.18■■■■□ 3.22
ITGBL1-206ENST00000618057 SCRIBQ14160 1630 aa34.46■■■■□ 3.11
ITGBL1-206ENST00000618057 ABCC9O60706 1549 aa34.39■■■■□ 3.1
ITGBL1-206ENST00000618057 LOC105371045A0A1W2PR82 267 aa34.31■■■■□ 3.08
ITGBL1-206ENST00000618057 PCGF6Q9BYE7 350 aa34.23■■■■□ 3.07
ITGBL1-206ENST00000618057 RSF1Q96T23 1441 aaPredicted RBP34.17■■■■□ 3.06
ITGBL1-206ENST00000618057 HRCP23327 699 aa34.13■■■■□ 3.05
ITGBL1-206ENST00000618057 RB1CC1Q8TDY2 1594 aa33.87■■■■□ 3.01
ITGBL1-206ENST00000618057 NACADO15069 1562 aa33.78■■■■□ 3
ITGBL1-206ENST00000618057 CECR2Q9BXF3 1484 aa33.76■■■□□ 2.99
ITGBL1-206ENST00000618057 TRIM41Q8WV44 630 aa33.7■■■□□ 2.99
ITGBL1-206ENST00000618057 PPARGC1BQ86YN6 1023 aaKnown RBP33.65■■■□□ 2.98
ITGBL1-206ENST00000618057 FAM9AQ8IZU1 332 aaPredicted RBP33.61■■■□□ 2.97
ITGBL1-206ENST00000618057 MROH2BQ7Z745 1585 aa33.59■■■□□ 2.97
ITGBL1-206ENST00000618057 EHMT2Q96KQ7 1210 aa33.46■■■□□ 2.95
ITGBL1-206ENST00000618057 WIZO95785 1651 aa33.44■■■□□ 2.94
ITGBL1-206ENST00000618057 TRIM26Q12899 539 aaPredicted RBP33.42■■■□□ 2.94
ITGBL1-206ENST00000618057 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
ITGBL1-206ENST00000618057 EIF4G1Q04637 1599 aaKnown RBP32.9■■■□□ 2.86
ITGBL1-206ENST00000618057 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
ITGBL1-206ENST00000618057 SMARCA4P51532 1647 aa32.82■■■□□ 2.84
ITGBL1-206ENST00000618057 TOP2AP11388 1531 aaKnown RBP32.78■■■□□ 2.84
ITGBL1-206ENST00000618057 ABCC8Q09428 1581 aa32.75■■■□□ 2.83
ITGBL1-206ENST00000618057 CCDC88BA6NC98 1476 aa32.74■■■□□ 2.83
ITGBL1-206ENST00000618057 PABPN1Q86U42 306 aaKnown RBP eCLIP32.68■■■□□ 2.82
ITGBL1-206ENST00000618057 SMARCA2P51531 1590 aa32.66■■■□□ 2.82
ITGBL1-206ENST00000618057 ZEB1P37275 1124 aaPredicted RBP32.56■■■□□ 2.8
ITGBL1-206ENST00000618057 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
ITGBL1-206ENST00000618057 SOGA1O94964 1423 aa32.44■■■□□ 2.78
ITGBL1-206ENST00000618057 TTBK1Q5TCY1 1321 aaPredicted RBP32.35■■■□□ 2.77
ITGBL1-206ENST00000618057 RUSC2Q8N2Y8 1516 aa32.32■■■□□ 2.76
ITGBL1-206ENST00000618057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.26■■■□□ 2.76
ITGBL1-206ENST00000618057 CEP162Q5TB80 1403 aa32.23■■■□□ 2.75
ITGBL1-206ENST00000618057 CSRNP3Q8WYN3 585 aa32.17■■■□□ 2.74
ITGBL1-206ENST00000618057 UBTFP17480 764 aaKnown RBP32.14■■■□□ 2.73
ITGBL1-206ENST00000618057 TNIKQ9UKE5 1360 aa32.1■■■□□ 2.73
ITGBL1-206ENST00000618057 CCER1Q8TC90 406 aaPredicted RBP32.09■■■□□ 2.73
ITGBL1-206ENST00000618057 WRNQ14191 1432 aaPredicted RBP eCLIP32.08■■■□□ 2.73
ITGBL1-206ENST00000618057 PEG3Q9GZU2 1588 aa32.08■■■□□ 2.73
ITGBL1-206ENST00000618057 EEA1Q15075 1411 aa32.01■■■□□ 2.72
ITGBL1-206ENST00000618057 ATAD2BQ9ULI0 1458 aa31.98■■■□□ 2.71
ITGBL1-206ENST00000618057 SYNJ1O43426 1573 aa31.98■■■□□ 2.71
ITGBL1-206ENST00000618057 GOLGA3Q08378 1498 aa31.92■■■□□ 2.7
ITGBL1-206ENST00000618057 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
ITGBL1-206ENST00000618057 CEP164Q9UPV0 1460 aa31.72■■■□□ 2.67
ITGBL1-206ENST00000618057 RANGAP1P46060 587 aaPredicted RBP31.68■■■□□ 2.66
ITGBL1-206ENST00000618057 KIF21BO75037 1637 aa31.65■■■□□ 2.66
ITGBL1-206ENST00000618057 CLIP1P30622 1438 aa31.62■■■□□ 2.65
ITGBL1-206ENST00000618057 RAPGEF2Q9Y4G8 1499 aa31.61■■■□□ 2.65
ITGBL1-206ENST00000618057 SCAF1Q9H7N4 1312 aaKnown RBP31.56■■■□□ 2.64
ITGBL1-206ENST00000618057 HNRNPUL2Q1KMD3 747 aaKnown RBP31.51■■■□□ 2.63
ITGBL1-206ENST00000618057 TOP2BQ02880 1626 aa31.48■■■□□ 2.63
ITGBL1-206ENST00000618057 DIEXFQ68CQ4 756 aaKnown RBP31.44■■■□□ 2.62
ITGBL1-206ENST00000618057 VPS8Q8N3P4 1428 aa31.43■■■□□ 2.62
ITGBL1-206ENST00000618057 BIVM-ERCC5R4GMW8 1640 aa31.34■■■□□ 2.61
ITGBL1-206ENST00000618057 APLP2Q06481 763 aa31.32■■■□□ 2.61
ITGBL1-206ENST00000618057 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
ITGBL1-206ENST00000618057 CUX1P39880 1505 aa31.25■■■□□ 2.59
ITGBL1-206ENST00000618057 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
ITGBL1-206ENST00000618057 NEUROD1Q13562 356 aa31.22■■■□□ 2.59
ITGBL1-206ENST00000618057 PRXQ9BXM0 1461 aa31.19■■■□□ 2.58
ITGBL1-206ENST00000618057 ZNF316A6NFI3 1004 aaPredicted RBP31.17■■■□□ 2.58
ITGBL1-206ENST00000618057 ACIN1Q9UKV3 1341 aaKnown RBP31.17■■■□□ 2.58
ITGBL1-206ENST00000618057 ARAP1Q96P48 1450 aa31.12■■■□□ 2.57
ITGBL1-206ENST00000618057 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
ITGBL1-206ENST00000618057 CFTRP13569 1480 aa31.08■■■□□ 2.57
ITGBL1-206ENST00000618057 KANK4Q5T7N3 995 aaPredicted RBP31.07■■■□□ 2.56
ITGBL1-206ENST00000618057 KIF27Q86VH2 1401 aa31.04■■■□□ 2.56
ITGBL1-206ENST00000618057 CENPBP07199 599 aaPredicted RBP30.9■■■□□ 2.54
ITGBL1-206ENST00000618057 GTF3C3Q9Y5Q9 886 aa30.88■■■□□ 2.53
ITGBL1-206ENST00000618057 YTHDC1Q96MU7 727 aaKnown RBP30.85■■■□□ 2.53
ITGBL1-206ENST00000618057 ARHGAP35Q9NRY4 1499 aa30.84■■■□□ 2.53
ITGBL1-206ENST00000618057 MIER1Q8N108 512 aa30.84■■■□□ 2.53
ITGBL1-206ENST00000618057 CUX2O14529 1486 aa30.82■■■□□ 2.52
ITGBL1-206ENST00000618057 IGF1RP08069 1367 aa30.77■■■□□ 2.52
ITGBL1-206ENST00000618057 DHX57Q6P158 1386 aaKnown RBP30.77■■■□□ 2.52
ITGBL1-206ENST00000618057 PRDM2Q13029 1718 aa30.76■■■□□ 2.51
ITGBL1-206ENST00000618057 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
ITGBL1-206ENST00000618057 ITGAEP38570 1179 aa30.72■■■□□ 2.51
ITGBL1-206ENST00000618057 FGD5Q6ZNL6 1462 aa30.69■■■□□ 2.5
ITGBL1-206ENST00000618057 RRBP1Q9P2E9 1410 aaKnown RBP30.68■■■□□ 2.5
ITGBL1-206ENST00000618057 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
ITGBL1-206ENST00000618057 CC2D2AQ9P2K1 1620 aa30.62■■■□□ 2.49
ITGBL1-206ENST00000618057 CCNB3Q8WWL7 1395 aa30.61■■■□□ 2.49
ITGBL1-206ENST00000618057 P3H3Q8IVL6 736 aa30.55■■■□□ 2.48
ITGBL1-206ENST00000618057 PELP1Q8IZL8 1130 aaKnown RBP30.55■■■□□ 2.48
ITGBL1-206ENST00000618057 CLSPNQ9HAW4 1339 aa30.55■■■□□ 2.48
ITGBL1-206ENST00000618057 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
ITGBL1-206ENST00000618057 TIAM1Q13009 1591 aa30.46■■■□□ 2.47
ITGBL1-206ENST00000618057 RAD54L2Q9Y4B4 1467 aa30.46■■■□□ 2.47
ITGBL1-206ENST00000618057 ATP1B4Q9UN42 357 aaPredicted RBP30.43■■■□□ 2.46
ITGBL1-206ENST00000618057 NESP48681 1621 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms