Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TMEM258P61165 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TMEM258P61165 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.1□□□□□ -0.47
TMEM258P61165 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
TMEM258P61165 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
TMEM258P61165 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.1□□□□□ -0.47
TMEM258P61165 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.1□□□□□ -0.47
TMEM258P61165 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
TMEM258P61165 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.1□□□□□ -0.47
TMEM258P61165 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC12.1□□□□□ -0.47
TMEM258P61165 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.1□□□□□ -0.47
TMEM258P61165 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 SIRPAP1-201ENST00000448467 1770 ntBASIC12.1□□□□□ -0.47
TMEM258P61165 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.1□□□□□ -0.47
TMEM258P61165 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TMEM258P61165 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TMEM258P61165 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM258P61165 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM258P61165 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.09□□□□□ -0.47
TMEM258P61165 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TMEM258P61165 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.09□□□□□ -0.47
TMEM258P61165 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
TMEM258P61165 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
TMEM258P61165 AL161729.1-201ENST00000604104 1402 ntBASIC12.09□□□□□ -0.47
TMEM258P61165 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TMEM258P61165 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TMEM258P61165 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TMEM258P61165 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM258P61165 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TMEM258P61165 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TMEM258P61165 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TMEM258P61165 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TMEM258P61165 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TMEM258P61165 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.08□□□□□ -0.48
TMEM258P61165 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.08□□□□□ -0.48
TMEM258P61165 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
TMEM258P61165 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM258P61165 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC12.08□□□□□ -0.48
TMEM258P61165 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.08□□□□□ -0.48
TMEM258P61165 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.08□□□□□ -0.48
TMEM258P61165 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM258P61165 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TMEM258P61165 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
TMEM258P61165 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
TMEM258P61165 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM258P61165 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM258P61165 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM258P61165 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TMEM258P61165 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
TMEM258P61165 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM258P61165 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TMEM258P61165 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM258P61165 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM258P61165 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM258P61165 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.07□□□□□ -0.48
TMEM258P61165 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms