Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 EIF3D-207ENST00000457241 729 ntTSL 215□□□□□ -0.015e-10■■■■□ 23.8
RPS3P23396 TFR2-204ENST00000462090 1844 ntTSL 518.49■□□□□ 0.551e-6■■■■□ 23.8
RPS3P23396 TFR2-212ENST00000476304 2421 ntTSL 517.08■□□□□ 0.321e-6■■■■□ 23.8
RPS3P23396 TFR2-213ENST00000490084 2196 ntTSL 216.91■□□□□ 0.31e-6■■■■□ 23.8
RPS3P23396 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.31e-7■■■■□ 23.8
RPS3P23396 SERPINF1-210ENST00000573770 789 ntTSL 312.15□□□□□ -0.461e-22■■■■□ 23.8
RPS3P23396 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.88■□□□□ 0.133e-17■■■■□ 23.7
RPS3P23396 RPL30-211ENST00000521726 1129 ntTSL 315.03■□□□□ -03e-17■■■■□ 23.7
RPS3P23396 RPL30-206ENST00000518850 614 ntTSL 213.81□□□□□ -0.23e-17■■■■□ 23.7
RPS3P23396 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.533e-17■■■■□ 23.7
RPS3P23396 RPL30-213ENST00000523172 274 ntTSL 5 BASIC11.01□□□□□ -0.653e-17■■■■□ 23.7
RPS3P23396 RPL30-205ENST00000518164 1128 ntTSL 1 (best)11.01□□□□□ -0.653e-17■■■■□ 23.7
RPS3P23396 RPL30-209ENST00000521291 575 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.843e-17■■■■□ 23.7
RPS3P23396 RPL30-210ENST00000521534 573 ntTSL 21.34□□□□□ -2.191e-16■■■■□ 23.7
RPS3P23396 NDUFS2-204ENST00000467295 1060 ntTSL 320.27■□□□□ 0.843e-10■■■■□ 23.7
RPS3P23396 ACAT2-202ENST00000467951 856 ntTSL 315.95■□□□□ 0.142e-10■■■■□ 23.7
RPS3P23396 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.242e-8■■■■□ 23.7
RPS3P23396 TUBA1B-201ENST00000332858 3198 ntTSL 1 (best)13.13□□□□□ -0.312e-8■■■■□ 23.7
RPS3P23396 TUBA1B-204ENST00000547765 1875 ntTSL 513.09□□□□□ -0.312e-8■■■■□ 23.7
RPS3P23396 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.88■□□□□ 0.612e-6■■■■□ 23.7
RPS3P23396 PGM1-201ENST00000371083 2657 ntTSL 2 BASIC10.45□□□□□ -0.742e-6■■■■□ 23.7
RPS3P23396 CD320-203ENST00000596002 1729 ntTSL 1 (best)18.77■□□□□ 0.591e-8■■■■□ 23.7
RPS3P23396 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.421e-8■■■■□ 23.7
RPS3P23396 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.65■□□□□ 0.421e-8■■■■□ 23.7
RPS3P23396 CD320-206ENST00000599573 861 ntTSL 216.92■□□□□ 0.31e-8■■■■□ 23.7
RPS3P23396 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.52■□□□□ 0.727e-7■■■■□ 23.7
RPS3P23396 HSD17B12-211ENST00000636007 563 ntTSL 417.78■□□□□ 0.447e-7■■■■□ 23.7
RPS3P23396 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.317e-7■■■■□ 23.7
RPS3P23396 ENO1-205ENST00000492343 826 ntTSL 1 (best)7.99□□□□□ -1.132e-44■■■■□ 23.7
RPS3P23396 ISYNA1-204ENST00000577916 2148 ntTSL 524.02■■□□□ 1.442e-7■■■■□ 23.7
RPS3P23396 ISYNA1-211ENST00000582811 2039 ntTSL 221.26■□□□□ 0.992e-7■■■■□ 23.7
RPS3P23396 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.82e-6■■■■□ 23.7
RPS3P23396 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.792e-7■■■■□ 23.7
RPS3P23396 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.95■□□□□ 0.782e-6■■■■□ 23.7
RPS3P23396 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.38■□□□□ 0.372e-7■■■■□ 23.7
RPS3P23396 ISYNA1-210ENST00000582770 1654 ntTSL 217.08■□□□□ 0.322e-7■■■■□ 23.7
RPS3P23396 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.6■□□□□ 0.252e-6■■■■□ 23.7
RPS3P23396 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.092e-6■■■■□ 23.7
RPS3P23396 ISYNA1-203ENST00000577820 1466 ntTSL 514.12□□□□□ -0.152e-7■■■■□ 23.7
RPS3P23396 TMEM41B-201ENST00000299596 1443 ntTSL 1 (best)13.38□□□□□ -0.272e-6■■■■□ 23.7
RPS3P23396 TMEM41B-202ENST00000524543 3848 ntTSL 211.43□□□□□ -0.582e-6■■■■□ 23.7
RPS3P23396 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.89□□□□□ -0.352e-10■■■■□ 23.7
RPS3P23396 SON-208ENST00000455528 8394 ntTSL 1 (best)11.67□□□□□ -0.542e-10■■■■□ 23.7
RPS3P23396 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.21□□□□□ -0.612e-10■■■■□ 23.7
RPS3P23396 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.82□□□□□ -0.682e-10■■■■□ 23.7
RPS3P23396 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.95□□□□□ -1.622e-10■■■■□ 23.7
RPS3P23396 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.73■□□□□ 0.435e-19■■■■□ 23.7
RPS3P23396 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.52e-26■■■■□ 23.7
RPS3P23396 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.042e-26■■■■□ 23.7
RPS3P23396 GNG5-203ENST00000487806 557 ntTSL 31.33□□□□□ -2.22e-26■■■■□ 23.7
RPS3P23396 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.48■□□□□ 0.392e-8■■■■□ 23.7
RPS3P23396 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.62□□□□□ -0.232e-8■■■■□ 23.7
RPS3P23396 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-8■■■■□ 23.7
RPS3P23396 PSMA1-207ENST00000528307 1394 ntTSL 53.56□□□□□ -1.842e-8■■■■□ 23.7
RPS3P23396 SLC3A2-216ENST00000541372 269 ntTSL 515.05■□□□□ -02e-11■■■■□ 23.7
RPS3P23396 EIF4A1-215ENST00000580886 562 ntTSL 29.88□□□□□ -0.831e-12■■■■□ 23.7
RPS3P23396 EIF4A1-212ENST00000579085 569 ntTSL 48.32□□□□□ -1.081e-12■■■■□ 23.7
RPS3P23396 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.634e-15■■■■□ 23.7
RPS3P23396 RPL15-209ENST00000436146 1990 ntTSL 56.55□□□□□ -1.364e-15■■■■□ 23.7
RPS3P23396 PCOLCE-205ENST00000472348 960 ntTSL 215.91■□□□□ 0.144e-7■■■■□ 23.7
RPS3P23396 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.845e-8■■■■□ 23.7
RPS3P23396 TM4SF5-202ENST00000576530 932 ntTSL 1 (best)18.24■□□□□ 0.515e-8■■■■□ 23.7
RPS3P23396 ATP5F1-203ENST00000464154 621 ntTSL 29□□□□□ -0.976e-7■■■■□ 23.7
RPS3P23396 CAP1-216ENST00000449311 681 ntTSL 516.58■□□□□ 0.242e-9■■■■□ 23.7
RPS3P23396 CAP1-210ENST00000420216 668 ntTSL 514□□□□□ -0.172e-9■■■■□ 23.7
RPS3P23396 CAP1-209ENST00000417287 610 ntTSL 512.72□□□□□ -0.372e-9■■■■□ 23.7
RPS3P23396 SCAMP2-206ENST00000565345 790 ntTSL 518.38■□□□□ 0.538e-8■■■■□ 23.7
RPS3P23396 SCAMP2-205ENST00000564529 866 ntTSL 215.04■□□□□ -08e-8■■■■□ 23.7
RPS3P23396 SCAMP2-202ENST00000562363 638 ntTSL 510.92□□□□□ -0.668e-8■■■■□ 23.7
RPS3P23396 EPCAM-205ENST00000474691 714 ntTSL 513.12□□□□□ -0.314e-9■■■■□ 23.7
RPS3P23396 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.772e-6■■■■□ 23.7
RPS3P23396 SF3B1-206ENST00000462613 141 ntTSL 36.27□□□□□ -1.411e-6■■■■□ 23.7
RPS3P23396 LRRC41-205ENST00000498402 2068 ntTSL 217.34■□□□□ 0.374e-9■■■■□ 23.7
RPS3P23396 CCNB2-204ENST00000561077 687 ntTSL 59.4□□□□□ -0.91e-6■■■■□ 23.6
RPS3P23396 HLA-C-205ENST00000466892 754 nt16.14■□□□□ 0.179e-19■■■■□ 23.6
RPS3P23396 SUN2-208ENST00000438058 1012 ntTSL 322.13■■□□□ 1.135e-7■■■■□ 23.6
RPS3P23396 SLC25A5-203ENST00000463551 433 ntTSL 25.82□□□□□ -1.487e-18■■■■□ 23.6
RPS3P23396 SHMT2-225ENST00000556798 525 ntTSL 217.13■□□□□ 0.335e-8■■■■□ 23.6
RPS3P23396 SMAD4-213ENST00000591914 992 ntTSL 326.45■■□□□ 1.821e-8■■■■□ 23.6
RPS3P23396 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.631e-8■■■■□ 23.6
RPS3P23396 AC091551.1-202ENST00000588256 526 ntTSL 418.05■□□□□ 0.481e-8■■■■□ 23.6
RPS3P23396 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.341e-8■■■■□ 23.6
RPS3P23396 PQBP1-217ENST00000486150 831 ntTSL 314.71□□□□□ -0.051e-8■■■■□ 23.6
RPS3P23396 DNASE2-203ENST00000588777 727 ntTSL 212.13□□□□□ -0.471e-8■■■■□ 23.6
RPS3P23396 SMAD4-206ENST00000588860 779 ntTSL 48.68□□□□□ -1.021e-8■■■■□ 23.6
RPS3P23396 SMAD4-210ENST00000590061 544 ntTSL 47.26□□□□□ -1.251e-8■■■■□ 23.6
RPS3P23396 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.651e-8■■■■□ 23.6
RPS3P23396 SMAD4-207ENST00000589076 576 ntTSL 50.53□□□□□ -2.321e-8■■■■□ 23.6
RPS3P23396 MARCH7-209ENST00000539065 3303 ntTSL 2 BASIC11.93□□□□□ -0.54e-7■■■■□ 23.6
RPS3P23396 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.454e-7■■■■□ 23.6
RPS3P23396 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.111e-6■■■■□ 23.6
RPS3P23396 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.02■□□□□ 0.964e-6■■■■□ 23.6
RPS3P23396 ZDHHC7-202ENST00000344861 2727 ntTSL 1 (best)16.06■□□□□ 0.164e-6■■■■□ 23.6
RPS3P23396 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.444e-6■■■■□ 23.6
RPS3P23396 LRG1-201ENST00000306390 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.481e-6■■■■□ 23.6
RPS3P23396 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC8.63□□□□□ -1.038e-7■■■■□ 23.6
RPS3P23396 IQGAP1-218ENST00000633485 5863 ntTSL 57.28□□□□□ -1.248e-7■■■■□ 23.6
RPS3P23396 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.278e-7■■■■□ 23.6
RPS3P23396 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.34□□□□□ -1.555e-8■■■■□ 23.6
RPS3P23396 PGD-207ENST00000491493 806 ntTSL 516.7■□□□□ 0.262e-7■■■■□ 23.6
Retrieved 100 of 24,271 protein–RNA pairs in 219.6 ms