RNA–Protein interactions for RNA: ENST00000528307.5

PSMA1-207, Transcript of proteasome subunit alpha 1, humanhuman

TSL 5

Gene PSMA1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-207ENST00000528307 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
PSMA1-207ENST00000528307 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
PSMA1-207ENST00000528307 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
PSMA1-207ENST00000528307 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
PSMA1-207ENST00000528307 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
PSMA1-207ENST00000528307 FOXD1Q16676 465 aa18.05■□□□□ 0.48
PSMA1-207ENST00000528307 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.45
PSMA1-207ENST00000528307 ADRA2BP18089 450 aa17.79■□□□□ 0.44
PSMA1-207ENST00000528307 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
PSMA1-207ENST00000528307 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.31
PSMA1-207ENST00000528307 KCNA4P22459 653 aa16.88■□□□□ 0.29
PSMA1-207ENST00000528307 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
PSMA1-207ENST00000528307 MSH5O43196 834 aa16.57■□□□□ 0.24
PSMA1-207ENST00000528307 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
PSMA1-207ENST00000528307 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
PSMA1-207ENST00000528307 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
PSMA1-207ENST00000528307 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
PSMA1-207ENST00000528307 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
PSMA1-207ENST00000528307 CNKSR2Q8WXI2 1034 aa15.97■□□□□ 0.15
PSMA1-207ENST00000528307 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
PSMA1-207ENST00000528307 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
PSMA1-207ENST00000528307 ZBTB22O15209 634 aa15.65■□□□□ 0.1
PSMA1-207ENST00000528307 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
PSMA1-207ENST00000528307 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
PSMA1-207ENST00000528307 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
PSMA1-207ENST00000528307 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
PSMA1-207ENST00000528307 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
PSMA1-207ENST00000528307 SLC4A2P04920 1241 aa15.21■□□□□ 0.02
PSMA1-207ENST00000528307 DCAF8L1A6NGE4 600 aa14.78□□□□□ -0.04
PSMA1-207ENST00000528307 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
PSMA1-207ENST00000528307 ATF5Q9Y2D1 282 aaPredicted RBP14.6□□□□□ -0.07
PSMA1-207ENST00000528307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.075e-6■■■■□ 19.5
PSMA1-207ENST00000528307 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
PSMA1-207ENST00000528307 ATXN8OSP0DMR3 200 aa14.59□□□□□ -0.07
PSMA1-207ENST00000528307 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
PSMA1-207ENST00000528307 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
PSMA1-207ENST00000528307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
PSMA1-207ENST00000528307 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
PSMA1-207ENST00000528307 FKBP8Q14318 412 aa14.19□□□□□ -0.14
PSMA1-207ENST00000528307 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
PSMA1-207ENST00000528307 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
PSMA1-207ENST00000528307 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
PSMA1-207ENST00000528307 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.18
PSMA1-207ENST00000528307 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
PSMA1-207ENST00000528307 APLP2Q06481 763 aa13.9□□□□□ -0.18
PSMA1-207ENST00000528307 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.19
PSMA1-207ENST00000528307 RTN4Q9NQC3 1192 aaKnown RBP13.83□□□□□ -0.19
PSMA1-207ENST00000528307 CAPN15O75808 1086 aa13.83□□□□□ -0.2
PSMA1-207ENST00000528307 POLA2Q14181 598 aa13.81□□□□□ -0.2
PSMA1-207ENST00000528307 ABCB7O75027 752 aa13.73□□□□□ -0.21
PSMA1-207ENST00000528307 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
PSMA1-207ENST00000528307 PROM2Q8N271 834 aa13.63□□□□□ -0.23
PSMA1-207ENST00000528307 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
PSMA1-207ENST00000528307 DSG3P32926 999 aa13.59□□□□□ -0.23
PSMA1-207ENST00000528307 FBLN2P98095 1184 aa13.59□□□□□ -0.23
PSMA1-207ENST00000528307 POTEHQ6S545 545 aa13.47□□□□□ -0.25
PSMA1-207ENST00000528307 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
PSMA1-207ENST00000528307 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
PSMA1-207ENST00000528307 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
PSMA1-207ENST00000528307 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
PSMA1-207ENST00000528307 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
PSMA1-207ENST00000528307 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
PSMA1-207ENST00000528307 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
PSMA1-207ENST00000528307 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
PSMA1-207ENST00000528307 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
PSMA1-207ENST00000528307 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
PSMA1-207ENST00000528307 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
PSMA1-207ENST00000528307 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
PSMA1-207ENST00000528307 PKD2Q13563 968 aa13.04□□□□□ -0.32
PSMA1-207ENST00000528307 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
PSMA1-207ENST00000528307 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
PSMA1-207ENST00000528307 SPOCK2Q92563 424 aa12.88□□□□□ -0.35
PSMA1-207ENST00000528307 PLCD3Q8N3E9 789 aa12.87□□□□□ -0.35
PSMA1-207ENST00000528307 MIER1Q8N108 512 aa12.85□□□□□ -0.35
PSMA1-207ENST00000528307 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
PSMA1-207ENST00000528307 RGL2O15211 777 aa12.72□□□□□ -0.37
PSMA1-207ENST00000528307 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
PSMA1-207ENST00000528307 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
PSMA1-207ENST00000528307 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.37
PSMA1-207ENST00000528307 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
PSMA1-207ENST00000528307 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
PSMA1-207ENST00000528307 PLCB2Q00722 1185 aa12.69□□□□□ -0.38
PSMA1-207ENST00000528307 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
PSMA1-207ENST00000528307 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
PSMA1-207ENST00000528307 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
PSMA1-207ENST00000528307 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
PSMA1-207ENST00000528307 NUBP1P53384 320 aa12.64□□□□□ -0.39
PSMA1-207ENST00000528307 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
PSMA1-207ENST00000528307 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
PSMA1-207ENST00000528307 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
PSMA1-207ENST00000528307 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
PSMA1-207ENST00000528307 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
PSMA1-207ENST00000528307 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
PSMA1-207ENST00000528307 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
PSMA1-207ENST00000528307 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
PSMA1-207ENST00000528307 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
PSMA1-207ENST00000528307 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
PSMA1-207ENST00000528307 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
PSMA1-207ENST00000528307 GSE1Q14687 1217 aa12.41□□□□□ -0.42
PSMA1-207ENST00000528307 DCAF8Q5TAQ9 597 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms