RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 NISCHQ9Y2I1 1504 aa30.89■■■□□ 2.54
PSMA1-201ENST00000396394 CCDC180Q9P1Z9 1646 aa27.51■■□□□ 1.99
PSMA1-201ENST00000396394 ABCC9O60706 1549 aa27.14■■□□□ 1.93
PSMA1-201ENST00000396394 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
PSMA1-201ENST00000396394 NACADO15069 1562 aa25.98■■□□□ 1.75
PSMA1-201ENST00000396394 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
PSMA1-201ENST00000396394 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
PSMA1-201ENST00000396394 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
PSMA1-201ENST00000396394 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.68
PSMA1-201ENST00000396394 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
PSMA1-201ENST00000396394 UNC13AQ9UPW8 1703 aa25.35■■□□□ 1.65
PSMA1-201ENST00000396394 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
PSMA1-201ENST00000396394 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
PSMA1-201ENST00000396394 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
PSMA1-201ENST00000396394 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
PSMA1-201ENST00000396394 EIF4G1Q04637 1599 aaKnown RBP24.6■■□□□ 1.53
PSMA1-201ENST00000396394 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
PSMA1-201ENST00000396394 CECR2Q9BXF3 1484 aa24.44■■□□□ 1.5
PSMA1-201ENST00000396394 NCAPD3P42695 1498 aa24■■□□□ 1.43
PSMA1-201ENST00000396394 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
PSMA1-201ENST00000396394 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
PSMA1-201ENST00000396394 ATAD2BQ9ULI0 1458 aa23.95■■□□□ 1.42
PSMA1-201ENST00000396394 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
PSMA1-201ENST00000396394 HMGXB3Q12766 1538 aa23.82■■□□□ 1.4
PSMA1-201ENST00000396394 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
PSMA1-201ENST00000396394 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
PSMA1-201ENST00000396394 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
PSMA1-201ENST00000396394 WIZO95785 1651 aa23.48■■□□□ 1.35
PSMA1-201ENST00000396394 RSF1Q96T23 1441 aaPredicted RBP23.46■■□□□ 1.35
PSMA1-201ENST00000396394 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
PSMA1-201ENST00000396394 NESP48681 1621 aa23.41■■□□□ 1.34
PSMA1-201ENST00000396394 LAMC3Q9Y6N6 1575 aa23.36■■□□□ 1.33
PSMA1-201ENST00000396394 CUX2O14529 1486 aa23.29■■□□□ 1.32
PSMA1-201ENST00000396394 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
PSMA1-201ENST00000396394 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
PSMA1-201ENST00000396394 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
PSMA1-201ENST00000396394 THOC2Q8NI27 1593 aaKnown RBP23.09■■□□□ 1.29
PSMA1-201ENST00000396394 CFTRP13569 1480 aa23.09■■□□□ 1.29
PSMA1-201ENST00000396394 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
PSMA1-201ENST00000396394 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
PSMA1-201ENST00000396394 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
PSMA1-201ENST00000396394 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
PSMA1-201ENST00000396394 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
PSMA1-201ENST00000396394 WDR62O43379 1518 aa22.91■■□□□ 1.26
PSMA1-201ENST00000396394 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
PSMA1-201ENST00000396394 PRDM2Q13029 1718 aa22.78■■□□□ 1.24
PSMA1-201ENST00000396394 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
PSMA1-201ENST00000396394 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
PSMA1-201ENST00000396394 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
PSMA1-201ENST00000396394 TOPBP1Q92547 1522 aa22.58■■□□□ 1.2
PSMA1-201ENST00000396394 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
PSMA1-201ENST00000396394 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
PSMA1-201ENST00000396394 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
PSMA1-201ENST00000396394 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
PSMA1-201ENST00000396394 OSCARQ8IYS5 282 aa22.34■■□□□ 1.17
PSMA1-201ENST00000396394 TARBP1Q13395 1621 aaKnown RBP22.32■■□□□ 1.16
PSMA1-201ENST00000396394 SOGA1O94964 1423 aa22.31■■□□□ 1.16
PSMA1-201ENST00000396394 CUX1P39880 1505 aa22.31■■□□□ 1.16
PSMA1-201ENST00000396394 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
PSMA1-201ENST00000396394 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
PSMA1-201ENST00000396394 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
PSMA1-201ENST00000396394 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.168e-8■■■■□ 20
PSMA1-201ENST00000396394 TDRD9Q8NDG6 1382 aaKnown RBP22.2■■□□□ 1.14
PSMA1-201ENST00000396394 WDR97A6NE52 1622 aa22.19■■□□□ 1.14
PSMA1-201ENST00000396394 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
PSMA1-201ENST00000396394 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
PSMA1-201ENST00000396394 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
PSMA1-201ENST00000396394 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
PSMA1-201ENST00000396394 FBLN2P98095 1184 aa22.06■■□□□ 1.12
PSMA1-201ENST00000396394 BIVM-ERCC5R4GMW8 1640 aa22.05■■□□□ 1.12
PSMA1-201ENST00000396394 GAPVD1Q14C86 1478 aa22.04■■□□□ 1.12
PSMA1-201ENST00000396394 SNAPC4Q5SXM2 1469 aa22.04■■□□□ 1.12
PSMA1-201ENST00000396394 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
PSMA1-201ENST00000396394 SYNJ1O43426 1573 aa22.02■■□□□ 1.12
PSMA1-201ENST00000396394 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
PSMA1-201ENST00000396394 CHD1O14646 1710 aa21.99■■□□□ 1.11
PSMA1-201ENST00000396394 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
PSMA1-201ENST00000396394 ABCA5Q8WWZ7 1642 aa21.96■■□□□ 1.11
PSMA1-201ENST00000396394 SYNJ2O15056 1496 aa21.95■■□□□ 1.1
PSMA1-201ENST00000396394 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
PSMA1-201ENST00000396394 ARHGEF11O15085 1522 aa21.89■■□□□ 1.1
PSMA1-201ENST00000396394 RIMBP3CA6NJZ7 1639 aa21.89■■□□□ 1.09
PSMA1-201ENST00000396394 RIMBP3BA6NNM3 1639 aa21.89■■□□□ 1.09
PSMA1-201ENST00000396394 RIMBP3Q9UFD9 1639 aa21.89■■□□□ 1.09
PSMA1-201ENST00000396394 ERICH3Q5RHP9 1530 aa21.82■■□□□ 1.08
PSMA1-201ENST00000396394 CLASP1Q7Z460 1538 aa21.82■■□□□ 1.08
PSMA1-201ENST00000396394 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
PSMA1-201ENST00000396394 GRIN2AQ12879 1464 aa21.77■■□□□ 1.08
PSMA1-201ENST00000396394 ADAMTS12P58397 1594 aa21.77■■□□□ 1.07
PSMA1-201ENST00000396394 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
PSMA1-201ENST00000396394 KIF27Q86VH2 1401 aa21.7■■□□□ 1.06
PSMA1-201ENST00000396394 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
PSMA1-201ENST00000396394 NUP160Q12769 1436 aa21.69■■□□□ 1.06
PSMA1-201ENST00000396394 IGF1RP08069 1367 aa21.65■■□□□ 1.06
PSMA1-201ENST00000396394 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
PSMA1-201ENST00000396394 CUL7Q14999 1698 aa21.54■■□□□ 1.04
PSMA1-201ENST00000396394 SHROOM2Q13796 1616 aa21.52■■□□□ 1.04
PSMA1-201ENST00000396394 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
PSMA1-201ENST00000396394 CARMIL1Q5VZK9 1371 aa21.51■■□□□ 1.03
PSMA1-201ENST00000396394 ERCC6L2Q5T890 1561 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms