RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 NISCHQ9Y2I1 1504 aa38.82■■■■□ 3.8
HLA-C-205ENST00000466892 CCDC180Q9P1Z9 1646 aa34.31■■■■□ 3.08
HLA-C-205ENST00000466892 ABCC9O60706 1549 aa33.02■■■□□ 2.88
HLA-C-205ENST00000466892 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
HLA-C-205ENST00000466892 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.76
HLA-C-205ENST00000466892 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
HLA-C-205ENST00000466892 NACADO15069 1562 aa32.19■■■□□ 2.74
HLA-C-205ENST00000466892 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
HLA-C-205ENST00000466892 RB1CC1Q8TDY2 1594 aa32.08■■■□□ 2.73
HLA-C-205ENST00000466892 SCRIBQ14160 1630 aa31.23■■■□□ 2.59
HLA-C-205ENST00000466892 UNC13AQ9UPW8 1703 aa31.14■■■□□ 2.58
HLA-C-205ENST00000466892 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.56
HLA-C-205ENST00000466892 SHROOM4Q9ULL8 1493 aa30.97■■■□□ 2.55
HLA-C-205ENST00000466892 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
HLA-C-205ENST00000466892 EIF4G1Q04637 1599 aaKnown RBP30.2■■■□□ 2.42
HLA-C-205ENST00000466892 CECR2Q9BXF3 1484 aa30.1■■■□□ 2.41
HLA-C-205ENST00000466892 BAZ1AQ9NRL2 1556 aaPredicted RBP30.09■■■□□ 2.41
HLA-C-205ENST00000466892 SMARCA4P51532 1647 aa29.98■■■□□ 2.39
HLA-C-205ENST00000466892 CC2D2AQ9P2K1 1620 aa29.9■■■□□ 2.38
HLA-C-205ENST00000466892 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
HLA-C-205ENST00000466892 DNAJC5BQ9UF47 199 aa29.83■■■□□ 2.37
HLA-C-205ENST00000466892 PEG3Q9GZU2 1588 aa29.78■■■□□ 2.36
HLA-C-205ENST00000466892 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
HLA-C-205ENST00000466892 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
HLA-C-205ENST00000466892 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
HLA-C-205ENST00000466892 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
HLA-C-205ENST00000466892 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
HLA-C-205ENST00000466892 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
HLA-C-205ENST00000466892 WIZO95785 1651 aa29.49■■■□□ 2.31
HLA-C-205ENST00000466892 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
HLA-C-205ENST00000466892 SUPT5HO00267 1087 aaKnown RBP29.22■■■□□ 2.27
HLA-C-205ENST00000466892 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.22
HLA-C-205ENST00000466892 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
HLA-C-205ENST00000466892 LAMC3Q9Y6N6 1575 aa28.82■■■□□ 2.2
HLA-C-205ENST00000466892 CFTRP13569 1480 aa28.78■■■□□ 2.2
HLA-C-205ENST00000466892 NESP48681 1621 aa28.68■■■□□ 2.18
HLA-C-205ENST00000466892 PDS5BQ9NTI5 1447 aa28.64■■■□□ 2.18
HLA-C-205ENST00000466892 ERCC6Q03468 1493 aa28.48■■■□□ 2.15
HLA-C-205ENST00000466892 FANCD2Q9BXW9 1451 aa28.47■■■□□ 2.15
HLA-C-205ENST00000466892 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
HLA-C-205ENST00000466892 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
HLA-C-205ENST00000466892 KIF21AQ7Z4S6 1674 aa28.32■■■□□ 2.12
HLA-C-205ENST00000466892 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
HLA-C-205ENST00000466892 THOC2Q8NI27 1593 aaKnown RBP28.21■■■□□ 2.11
HLA-C-205ENST00000466892 ABCC8Q09428 1581 aa28.2■■■□□ 2.1
HLA-C-205ENST00000466892 WDR62O43379 1518 aa28.18■■■□□ 2.1
HLA-C-205ENST00000466892 URB2Q14146 1524 aaKnown RBP28.13■■■□□ 2.09
HLA-C-205ENST00000466892 CUX2O14529 1486 aa28.1■■■□□ 2.09
HLA-C-205ENST00000466892 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
HLA-C-205ENST00000466892 TOPBP1Q92547 1522 aa28.06■■■□□ 2.08
HLA-C-205ENST00000466892 WRNQ14191 1432 aaPredicted RBP eCLIP28.05■■■□□ 2.08
HLA-C-205ENST00000466892 CUX1P39880 1505 aa27.99■■■□□ 2.07
HLA-C-205ENST00000466892 TOP2BQ02880 1626 aa27.92■■■□□ 2.06
HLA-C-205ENST00000466892 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.05
HLA-C-205ENST00000466892 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
HLA-C-205ENST00000466892 POLA1P09884 1462 aaPredicted RBP27.86■■■□□ 2.05
HLA-C-205ENST00000466892 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
HLA-C-205ENST00000466892 IFT140Q96RY7 1462 aa27.83■■■□□ 2.05
HLA-C-205ENST00000466892 SOGA1O94964 1423 aa27.75■■■□□ 2.03
HLA-C-205ENST00000466892 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.02
HLA-C-205ENST00000466892 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
HLA-C-205ENST00000466892 RAD54L2Q9Y4B4 1467 aa27.66■■■□□ 2.02
HLA-C-205ENST00000466892 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
HLA-C-205ENST00000466892 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
HLA-C-205ENST00000466892 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
HLA-C-205ENST00000466892 ZNF608Q9ULD9 1512 aaPredicted RBP27.55■■■□□ 2
HLA-C-205ENST00000466892 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
HLA-C-205ENST00000466892 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
HLA-C-205ENST00000466892 AQRO60306 1485 aaKnown RBP eCLIP27.46■■□□□ 1.99
HLA-C-205ENST00000466892 KIF27Q86VH2 1401 aa27.46■■□□□ 1.99
HLA-C-205ENST00000466892 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.99
HLA-C-205ENST00000466892 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.99
HLA-C-205ENST00000466892 GRIN2BQ13224 1484 aa27.42■■□□□ 1.98
HLA-C-205ENST00000466892 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
HLA-C-205ENST00000466892 EEA1Q15075 1411 aa27.32■■□□□ 1.96
HLA-C-205ENST00000466892 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
HLA-C-205ENST00000466892 PBRM1Q86U86 1689 aa27.26■■□□□ 1.95
HLA-C-205ENST00000466892 IGF1RP08069 1367 aa27.25■■□□□ 1.95
HLA-C-205ENST00000466892 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
HLA-C-205ENST00000466892 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
HLA-C-205ENST00000466892 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
HLA-C-205ENST00000466892 RUSC2Q8N2Y8 1516 aa27.18■■□□□ 1.94
HLA-C-205ENST00000466892 CUL7Q14999 1698 aa27.16■■□□□ 1.94
HLA-C-205ENST00000466892 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
HLA-C-205ENST00000466892 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
HLA-C-205ENST00000466892 CSRNP3Q8WYN3 585 aa27.1■■□□□ 1.93
HLA-C-205ENST00000466892 CARMIL1Q5VZK9 1371 aa27.09■■□□□ 1.93
HLA-C-205ENST00000466892 GRIN2AQ12879 1464 aa27.04■■□□□ 1.92
HLA-C-205ENST00000466892 PRXQ9BXM0 1461 aa27.04■■□□□ 1.92
HLA-C-205ENST00000466892 FBLN2P98095 1184 aa27.01■■□□□ 1.91
HLA-C-205ENST00000466892 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
HLA-C-205ENST00000466892 OSCARQ8IYS5 282 aa26.98■■□□□ 1.91
HLA-C-205ENST00000466892 CHD1O14646 1710 aa26.95■■□□□ 1.9
HLA-C-205ENST00000466892 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
HLA-C-205ENST00000466892 NUP160Q12769 1436 aa26.93■■□□□ 1.9
HLA-C-205ENST00000466892 KIF21BO75037 1637 aa26.89■■□□□ 1.9
HLA-C-205ENST00000466892 CEP170Q5SW79 1584 aa26.82■■□□□ 1.88
HLA-C-205ENST00000466892 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
HLA-C-205ENST00000466892 KIAA0586Q9BVV6 1533 aa26.8■■□□□ 1.88
HLA-C-205ENST00000466892 GOLGA3Q08378 1498 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms