RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 NISCHQ9Y2I1 1504 aa34.38■■■■□ 3.09
EPCAM-205ENST00000474691 ABCC9O60706 1549 aa31.18■■■□□ 2.58
EPCAM-205ENST00000474691 CCDC180Q9P1Z9 1646 aa30.87■■■□□ 2.53
EPCAM-205ENST00000474691 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
EPCAM-205ENST00000474691 DCAF8L2P0C7V8 631 aa29.43■■■□□ 2.3
EPCAM-205ENST00000474691 NACADO15069 1562 aa29.31■■■□□ 2.28
EPCAM-205ENST00000474691 DNAJC5BQ9UF47 199 aa29.31■■■□□ 2.28
EPCAM-205ENST00000474691 PABPN1Q86U42 306 aaKnown RBP eCLIP29.07■■■□□ 2.24
EPCAM-205ENST00000474691 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
EPCAM-205ENST00000474691 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
EPCAM-205ENST00000474691 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
EPCAM-205ENST00000474691 ZCCHC6Q5VYS8 1495 aaKnown RBP28.43■■■□□ 2.14
EPCAM-205ENST00000474691 DCAF1Q9Y4B6 1507 aa28.35■■■□□ 2.13
EPCAM-205ENST00000474691 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
EPCAM-205ENST00000474691 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
EPCAM-205ENST00000474691 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
EPCAM-205ENST00000474691 CC2D2AQ9P2K1 1620 aa28.08■■■□□ 2.09
EPCAM-205ENST00000474691 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
EPCAM-205ENST00000474691 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
EPCAM-205ENST00000474691 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
EPCAM-205ENST00000474691 NCAPD3P42695 1498 aa27.05■■□□□ 1.92
EPCAM-205ENST00000474691 ERCC6Q03468 1493 aa27.04■■□□□ 1.92
EPCAM-205ENST00000474691 ATAD2BQ9ULI0 1458 aa26.94■■□□□ 1.9
EPCAM-205ENST00000474691 CUX2O14529 1486 aa26.93■■□□□ 1.9
EPCAM-205ENST00000474691 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
EPCAM-205ENST00000474691 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
EPCAM-205ENST00000474691 HMGXB3Q12766 1538 aa26.81■■□□□ 1.88
EPCAM-205ENST00000474691 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
EPCAM-205ENST00000474691 BAZ1BQ9UIG0 1483 aaKnown RBP26.75■■□□□ 1.87
EPCAM-205ENST00000474691 NESP48681 1621 aa26.66■■□□□ 1.86
EPCAM-205ENST00000474691 PEG3Q9GZU2 1588 aa26.53■■□□□ 1.84
EPCAM-205ENST00000474691 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
EPCAM-205ENST00000474691 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
EPCAM-205ENST00000474691 PDS5BQ9NTI5 1447 aa26.44■■□□□ 1.82
EPCAM-205ENST00000474691 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
EPCAM-205ENST00000474691 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
EPCAM-205ENST00000474691 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
EPCAM-205ENST00000474691 MRC2Q9UBG0 1479 aa26.15■■□□□ 1.78
EPCAM-205ENST00000474691 WIZO95785 1651 aa26.15■■□□□ 1.78
EPCAM-205ENST00000474691 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
EPCAM-205ENST00000474691 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
EPCAM-205ENST00000474691 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
EPCAM-205ENST00000474691 WDR62O43379 1518 aa26.02■■□□□ 1.76
EPCAM-205ENST00000474691 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
EPCAM-205ENST00000474691 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
EPCAM-205ENST00000474691 CFTRP13569 1480 aa25.88■■□□□ 1.73
EPCAM-205ENST00000474691 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
EPCAM-205ENST00000474691 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
EPCAM-205ENST00000474691 URB2Q14146 1524 aaKnown RBP25.7■■□□□ 1.7
EPCAM-205ENST00000474691 CCDC88BA6NC98 1476 aa25.56■■□□□ 1.68
EPCAM-205ENST00000474691 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
EPCAM-205ENST00000474691 PRDM2Q13029 1718 aa25.52■■□□□ 1.68
EPCAM-205ENST00000474691 ABCC8Q09428 1581 aa25.45■■□□□ 1.66
EPCAM-205ENST00000474691 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
EPCAM-205ENST00000474691 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
EPCAM-205ENST00000474691 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
EPCAM-205ENST00000474691 FBLN2P98095 1184 aa25.31■■□□□ 1.64
EPCAM-205ENST00000474691 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
EPCAM-205ENST00000474691 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
EPCAM-205ENST00000474691 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
EPCAM-205ENST00000474691 EIF4G3O43432 1585 aaKnown RBP25.26■■□□□ 1.63
EPCAM-205ENST00000474691 ARHGEF11O15085 1522 aa25.23■■□□□ 1.63
EPCAM-205ENST00000474691 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.63
EPCAM-205ENST00000474691 CYB5RLQ6IPT4 315 aa25.22■■□□□ 1.63
EPCAM-205ENST00000474691 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
EPCAM-205ENST00000474691 SOGA1O94964 1423 aa25.12■■□□□ 1.61
EPCAM-205ENST00000474691 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
EPCAM-205ENST00000474691 TRHP20396 242 aaPredicted RBP25.1■■□□□ 1.61
EPCAM-205ENST00000474691 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
EPCAM-205ENST00000474691 CHD1O14646 1710 aa25.09■■□□□ 1.61
EPCAM-205ENST00000474691 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
EPCAM-205ENST00000474691 CHMP7Q8WUX9 453 aaPredicted RBP25.06■■□□□ 1.6
EPCAM-205ENST00000474691 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
EPCAM-205ENST00000474691 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
EPCAM-205ENST00000474691 ARAP1Q96P48 1450 aa24.95■■□□□ 1.58
EPCAM-205ENST00000474691 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
EPCAM-205ENST00000474691 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
EPCAM-205ENST00000474691 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.58
EPCAM-205ENST00000474691 SYNJ1O43426 1573 aa24.88■■□□□ 1.57
EPCAM-205ENST00000474691 CUX1P39880 1505 aa24.88■■□□□ 1.57
EPCAM-205ENST00000474691 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
EPCAM-205ENST00000474691 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
EPCAM-205ENST00000474691 GAPVD1Q14C86 1478 aa24.79■■□□□ 1.56
EPCAM-205ENST00000474691 CLASP1Q7Z460 1538 aa24.77■■□□□ 1.56
EPCAM-205ENST00000474691 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
EPCAM-205ENST00000474691 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
EPCAM-205ENST00000474691 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
EPCAM-205ENST00000474691 ABCA5Q8WWZ7 1642 aa24.59■■□□□ 1.53
EPCAM-205ENST00000474691 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
EPCAM-205ENST00000474691 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
EPCAM-205ENST00000474691 TOP2BQ02880 1626 aa24.45■■□□□ 1.5
EPCAM-205ENST00000474691 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
EPCAM-205ENST00000474691 NUP160Q12769 1436 aa24.43■■□□□ 1.5
EPCAM-205ENST00000474691 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
EPCAM-205ENST00000474691 CEP170Q5SW79 1584 aa24.4■■□□□ 1.5
EPCAM-205ENST00000474691 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
EPCAM-205ENST00000474691 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
EPCAM-205ENST00000474691 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
EPCAM-205ENST00000474691 PRG4Q92954 1404 aaPredicted RBP24.31■■□□□ 1.48
EPCAM-205ENST00000474691 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms