RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
SCAMP2-205ENST00000564529 ABCC9O60706 1549 aa33.42■■■□□ 2.94
SCAMP2-205ENST00000564529 CCDC180Q9P1Z9 1646 aa32.97■■■□□ 2.87
SCAMP2-205ENST00000564529 DNAJC5BQ9UF47 199 aa31.74■■■□□ 2.67
SCAMP2-205ENST00000564529 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
SCAMP2-205ENST00000564529 NACADO15069 1562 aa31.3■■■□□ 2.6
SCAMP2-205ENST00000564529 DCAF8L2P0C7V8 631 aa31.15■■■□□ 2.58
SCAMP2-205ENST00000564529 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
SCAMP2-205ENST00000564529 UNC13AQ9UPW8 1703 aa30.86■■■□□ 2.53
SCAMP2-205ENST00000564529 MYO15BQ96JP2 1530 aa30.74■■■□□ 2.51
SCAMP2-205ENST00000564529 BICRAQ9NZM4 1560 aa30.73■■■□□ 2.51
SCAMP2-205ENST00000564529 ZCCHC6Q5VYS8 1495 aaKnown RBP30.43■■■□□ 2.46
SCAMP2-205ENST00000564529 DCAF1Q9Y4B6 1507 aa30.25■■■□□ 2.43
SCAMP2-205ENST00000564529 SHROOM4Q9ULL8 1493 aa30.23■■■□□ 2.43
SCAMP2-205ENST00000564529 CECR2Q9BXF3 1484 aa30.14■■■□□ 2.42
SCAMP2-205ENST00000564529 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.41
SCAMP2-205ENST00000564529 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
SCAMP2-205ENST00000564529 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
SCAMP2-205ENST00000564529 DNAJC5Q9H3Z4 198 aa29.39■■■□□ 2.3
SCAMP2-205ENST00000564529 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
SCAMP2-205ENST00000564529 CUX2O14529 1486 aa28.92■■■□□ 2.22
SCAMP2-205ENST00000564529 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
SCAMP2-205ENST00000564529 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
SCAMP2-205ENST00000564529 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
SCAMP2-205ENST00000564529 HMGXB3Q12766 1538 aa28.64■■■□□ 2.18
SCAMP2-205ENST00000564529 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
SCAMP2-205ENST00000564529 NESP48681 1621 aa28.61■■■□□ 2.17
SCAMP2-205ENST00000564529 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
SCAMP2-205ENST00000564529 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
SCAMP2-205ENST00000564529 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
SCAMP2-205ENST00000564529 THOC2Q8NI27 1593 aaKnown RBP28.35■■■□□ 2.13
SCAMP2-205ENST00000564529 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
SCAMP2-205ENST00000564529 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
SCAMP2-205ENST00000564529 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
SCAMP2-205ENST00000564529 KIF21AQ7Z4S6 1674 aa28.17■■■□□ 2.1
SCAMP2-205ENST00000564529 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
SCAMP2-205ENST00000564529 MRC2Q9UBG0 1479 aa27.95■■■□□ 2.07
SCAMP2-205ENST00000564529 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
SCAMP2-205ENST00000564529 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
SCAMP2-205ENST00000564529 WDR62O43379 1518 aa27.88■■■□□ 2.05
SCAMP2-205ENST00000564529 WIZO95785 1651 aa27.87■■■□□ 2.05
SCAMP2-205ENST00000564529 CEP164Q9UPV0 1460 aa27.76■■■□□ 2.04
SCAMP2-205ENST00000564529 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
SCAMP2-205ENST00000564529 CFTRP13569 1480 aa27.64■■■□□ 2.02
SCAMP2-205ENST00000564529 OSCARQ8IYS5 282 aa27.59■■■□□ 2.01
SCAMP2-205ENST00000564529 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
SCAMP2-205ENST00000564529 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
SCAMP2-205ENST00000564529 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
SCAMP2-205ENST00000564529 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
SCAMP2-205ENST00000564529 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
SCAMP2-205ENST00000564529 IFT140Q96RY7 1462 aa27.23■■□□□ 1.95
SCAMP2-205ENST00000564529 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
SCAMP2-205ENST00000564529 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
SCAMP2-205ENST00000564529 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
SCAMP2-205ENST00000564529 CCDC88BA6NC98 1476 aa27.21■■□□□ 1.95
SCAMP2-205ENST00000564529 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
SCAMP2-205ENST00000564529 ARHGEF11O15085 1522 aa27.11■■□□□ 1.93
SCAMP2-205ENST00000564529 ABCC8Q09428 1581 aa27.04■■□□□ 1.92
SCAMP2-205ENST00000564529 EIF4G3O43432 1585 aaKnown RBP27.03■■□□□ 1.92
SCAMP2-205ENST00000564529 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
SCAMP2-205ENST00000564529 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
SCAMP2-205ENST00000564529 AQRO60306 1485 aaKnown RBP eCLIP26.97■■□□□ 1.916e-8■■■■□ 19.9
SCAMP2-205ENST00000564529 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
SCAMP2-205ENST00000564529 CHD1O14646 1710 aa26.89■■□□□ 1.9
SCAMP2-205ENST00000564529 FBLN2P98095 1184 aa26.87■■□□□ 1.89
SCAMP2-205ENST00000564529 POLA1P09884 1462 aaPredicted RBP26.85■■□□□ 1.89
SCAMP2-205ENST00000564529 ARAP1Q96P48 1450 aa26.84■■□□□ 1.89
SCAMP2-205ENST00000564529 TRHP20396 242 aaPredicted RBP26.8■■□□□ 1.88
SCAMP2-205ENST00000564529 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
SCAMP2-205ENST00000564529 TDRD9Q8NDG6 1382 aaKnown RBP26.76■■□□□ 1.87
SCAMP2-205ENST00000564529 SOGA1O94964 1423 aa26.73■■□□□ 1.87
SCAMP2-205ENST00000564529 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
SCAMP2-205ENST00000564529 FGD5Q6ZNL6 1462 aa26.63■■□□□ 1.85
SCAMP2-205ENST00000564529 CHMP7Q8WUX9 453 aaPredicted RBP26.61■■□□□ 1.85
SCAMP2-205ENST00000564529 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
SCAMP2-205ENST00000564529 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
SCAMP2-205ENST00000564529 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
SCAMP2-205ENST00000564529 CUX1P39880 1505 aa26.55■■□□□ 1.84
SCAMP2-205ENST00000564529 GRIN2BQ13224 1484 aa26.53■■□□□ 1.84
SCAMP2-205ENST00000564529 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
SCAMP2-205ENST00000564529 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
SCAMP2-205ENST00000564529 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.82
SCAMP2-205ENST00000564529 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
SCAMP2-205ENST00000564529 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
SCAMP2-205ENST00000564529 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
SCAMP2-205ENST00000564529 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
SCAMP2-205ENST00000564529 ABCA5Q8WWZ7 1642 aa26.27■■□□□ 1.8
SCAMP2-205ENST00000564529 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
SCAMP2-205ENST00000564529 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
SCAMP2-205ENST00000564529 TOP2BQ02880 1626 aa26.16■■□□□ 1.78
SCAMP2-205ENST00000564529 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
SCAMP2-205ENST00000564529 NUP160Q12769 1436 aa26.12■■□□□ 1.77
SCAMP2-205ENST00000564529 CEP170Q5SW79 1584 aa26.11■■□□□ 1.77
SCAMP2-205ENST00000564529 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
SCAMP2-205ENST00000564529 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
SCAMP2-205ENST00000564529 SHROOM2Q13796 1616 aa26.01■■□□□ 1.75
SCAMP2-205ENST00000564529 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
SCAMP2-205ENST00000564529 PRG4Q92954 1404 aaPredicted RBP25.91■■□□□ 1.74
SCAMP2-205ENST00000564529 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
SCAMP2-205ENST00000564529 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms