RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
TUBA1B-201ENST00000332858 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
TUBA1B-201ENST00000332858 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
TUBA1B-201ENST00000332858 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
TUBA1B-201ENST00000332858 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
TUBA1B-201ENST00000332858 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
TUBA1B-201ENST00000332858 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
TUBA1B-201ENST00000332858 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
TUBA1B-201ENST00000332858 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
TUBA1B-201ENST00000332858 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
TUBA1B-201ENST00000332858 ABCC9O60706 1549 aa22.26■■□□□ 1.15
TUBA1B-201ENST00000332858 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
TUBA1B-201ENST00000332858 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
TUBA1B-201ENST00000332858 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
TUBA1B-201ENST00000332858 HRCP23327 699 aa22■■□□□ 1.11
TUBA1B-201ENST00000332858 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
TUBA1B-201ENST00000332858 NACADO15069 1562 aa21.91■■□□□ 1.1
TUBA1B-201ENST00000332858 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
TUBA1B-201ENST00000332858 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
TUBA1B-201ENST00000332858 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
TUBA1B-201ENST00000332858 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
TUBA1B-201ENST00000332858 PPARGC1BQ86YN6 1023 aaKnown RBP21.69■■□□□ 1.06
TUBA1B-201ENST00000332858 WIZO95785 1651 aa21.66■■□□□ 1.06
TUBA1B-201ENST00000332858 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
TUBA1B-201ENST00000332858 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
TUBA1B-201ENST00000332858 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
TUBA1B-201ENST00000332858 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1
TUBA1B-201ENST00000332858 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
TUBA1B-201ENST00000332858 SMARCA4P51532 1647 aa21.28■■□□□ 1
TUBA1B-201ENST00000332858 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
TUBA1B-201ENST00000332858 PABPN1Q86U42 306 aaKnown RBP eCLIP21.23■□□□□ 0.99
TUBA1B-201ENST00000332858 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
TUBA1B-201ENST00000332858 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
TUBA1B-201ENST00000332858 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
TUBA1B-201ENST00000332858 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.96
TUBA1B-201ENST00000332858 SOGA1O94964 1423 aa21.02■□□□□ 0.95
TUBA1B-201ENST00000332858 ZEB1P37275 1124 aaPredicted RBP20.99■□□□□ 0.95
TUBA1B-201ENST00000332858 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
TUBA1B-201ENST00000332858 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.93
TUBA1B-201ENST00000332858 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
TUBA1B-201ENST00000332858 CEP162Q5TB80 1403 aa20.84■□□□□ 0.93
TUBA1B-201ENST00000332858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
TUBA1B-201ENST00000332858 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
TUBA1B-201ENST00000332858 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
TUBA1B-201ENST00000332858 UBTFP17480 764 aaKnown RBP20.79■□□□□ 0.92
TUBA1B-201ENST00000332858 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
TUBA1B-201ENST00000332858 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
TUBA1B-201ENST00000332858 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
TUBA1B-201ENST00000332858 EEA1Q15075 1411 aa20.72■□□□□ 0.91
TUBA1B-201ENST00000332858 SYNJ1O43426 1573 aa20.71■□□□□ 0.91
TUBA1B-201ENST00000332858 CCER1Q8TC90 406 aaPredicted RBP20.7■□□□□ 0.9
TUBA1B-201ENST00000332858 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
TUBA1B-201ENST00000332858 GOLGA3Q08378 1498 aa20.64■□□□□ 0.9
TUBA1B-201ENST00000332858 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
TUBA1B-201ENST00000332858 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
TUBA1B-201ENST00000332858 KIF21BO75037 1637 aa20.48■□□□□ 0.87
TUBA1B-201ENST00000332858 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
TUBA1B-201ENST00000332858 CLIP1P30622 1438 aa20.46■□□□□ 0.87
TUBA1B-201ENST00000332858 TOP2BQ02880 1626 aa20.4■□□□□ 0.86
TUBA1B-201ENST00000332858 HNRNPUL2Q1KMD3 747 aaKnown RBP20.36■□□□□ 0.85
TUBA1B-201ENST00000332858 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
TUBA1B-201ENST00000332858 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
TUBA1B-201ENST00000332858 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
TUBA1B-201ENST00000332858 BIVM-ERCC5R4GMW8 1640 aa20.29■□□□□ 0.84
TUBA1B-201ENST00000332858 HMGXB3Q12766 1538 aa20.28■□□□□ 0.84
TUBA1B-201ENST00000332858 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
TUBA1B-201ENST00000332858 CUX1P39880 1505 aa20.26■□□□□ 0.83
TUBA1B-201ENST00000332858 APLP2Q06481 763 aa20.24■□□□□ 0.83
TUBA1B-201ENST00000332858 PRXQ9BXM0 1461 aa20.23■□□□□ 0.83
TUBA1B-201ENST00000332858 CFTRP13569 1480 aa20.19■□□□□ 0.82
TUBA1B-201ENST00000332858 ERICH3Q5RHP9 1530 aa20.14■□□□□ 0.82
TUBA1B-201ENST00000332858 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
TUBA1B-201ENST00000332858 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
TUBA1B-201ENST00000332858 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
TUBA1B-201ENST00000332858 NEUROD1Q13562 356 aa20.11■□□□□ 0.81
TUBA1B-201ENST00000332858 ZNF316A6NFI3 1004 aaPredicted RBP20.11■□□□□ 0.81
TUBA1B-201ENST00000332858 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
TUBA1B-201ENST00000332858 ARHGAP35Q9NRY4 1499 aa19.98■□□□□ 0.79
TUBA1B-201ENST00000332858 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
TUBA1B-201ENST00000332858 IGF1RP08069 1367 aa19.97■□□□□ 0.79
TUBA1B-201ENST00000332858 CUX2O14529 1486 aa19.97■□□□□ 0.79
TUBA1B-201ENST00000332858 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
TUBA1B-201ENST00000332858 MIER1Q8N108 512 aa19.9■□□□□ 0.78
TUBA1B-201ENST00000332858 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
TUBA1B-201ENST00000332858 DHX57Q6P158 1386 aaKnown RBP19.9■□□□□ 0.78
TUBA1B-201ENST00000332858 GTF3C3Q9Y5Q9 886 aa19.88■□□□□ 0.77
TUBA1B-201ENST00000332858 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
TUBA1B-201ENST00000332858 CARMIL1Q5VZK9 1371 aa19.87■□□□□ 0.77
TUBA1B-201ENST00000332858 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
TUBA1B-201ENST00000332858 YTHDC1Q96MU7 727 aaKnown RBP19.86■□□□□ 0.77
TUBA1B-201ENST00000332858 RRBP1Q9P2E9 1410 aaKnown RBP19.86■□□□□ 0.77
TUBA1B-201ENST00000332858 ITGAEP38570 1179 aa19.85■□□□□ 0.77
TUBA1B-201ENST00000332858 CCNB3Q8WWL7 1395 aa19.81■□□□□ 0.76
TUBA1B-201ENST00000332858 P3H3Q8IVL6 736 aa19.79■□□□□ 0.76
TUBA1B-201ENST00000332858 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
TUBA1B-201ENST00000332858 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
TUBA1B-201ENST00000332858 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
TUBA1B-201ENST00000332858 NESP48681 1621 aa19.74■□□□□ 0.75
TUBA1B-201ENST00000332858 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
TUBA1B-201ENST00000332858 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms