RNA–Protein interactions for RNA: ENST00000562363.5

SCAMP2-202, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-202ENST00000562363 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
SCAMP2-202ENST00000562363 ABCC9O60706 1549 aa26.64■■□□□ 1.85
SCAMP2-202ENST00000562363 CCDC180Q9P1Z9 1646 aa26.46■■□□□ 1.83
SCAMP2-202ENST00000562363 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
SCAMP2-202ENST00000562363 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
SCAMP2-202ENST00000562363 NACADO15069 1562 aa25.03■■□□□ 1.6
SCAMP2-202ENST00000562363 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
SCAMP2-202ENST00000562363 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
SCAMP2-202ENST00000562363 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
SCAMP2-202ENST00000562363 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
SCAMP2-202ENST00000562363 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
SCAMP2-202ENST00000562363 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
SCAMP2-202ENST00000562363 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
SCAMP2-202ENST00000562363 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
SCAMP2-202ENST00000562363 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
SCAMP2-202ENST00000562363 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
SCAMP2-202ENST00000562363 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
SCAMP2-202ENST00000562363 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
SCAMP2-202ENST00000562363 DNAJC5Q9H3Z4 198 aa23.19■■□□□ 1.3
SCAMP2-202ENST00000562363 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
SCAMP2-202ENST00000562363 CUX2O14529 1486 aa23.04■■□□□ 1.28
SCAMP2-202ENST00000562363 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
SCAMP2-202ENST00000562363 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
SCAMP2-202ENST00000562363 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
SCAMP2-202ENST00000562363 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
SCAMP2-202ENST00000562363 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
SCAMP2-202ENST00000562363 NESP48681 1621 aa22.82■■□□□ 1.24
SCAMP2-202ENST00000562363 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
SCAMP2-202ENST00000562363 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
SCAMP2-202ENST00000562363 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
SCAMP2-202ENST00000562363 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
SCAMP2-202ENST00000562363 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
SCAMP2-202ENST00000562363 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
SCAMP2-202ENST00000562363 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
SCAMP2-202ENST00000562363 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
SCAMP2-202ENST00000562363 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
SCAMP2-202ENST00000562363 WIZO95785 1651 aa22.34■■□□□ 1.17
SCAMP2-202ENST00000562363 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
SCAMP2-202ENST00000562363 WDR62O43379 1518 aa22.3■■□□□ 1.16
SCAMP2-202ENST00000562363 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
SCAMP2-202ENST00000562363 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
SCAMP2-202ENST00000562363 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
SCAMP2-202ENST00000562363 CFTRP13569 1480 aa22.09■■□□□ 1.13
SCAMP2-202ENST00000562363 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
SCAMP2-202ENST00000562363 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
SCAMP2-202ENST00000562363 URB2Q14146 1524 aaKnown RBP21.99■■□□□ 1.11
SCAMP2-202ENST00000562363 PRDM2Q13029 1718 aa21.89■■□□□ 1.1
SCAMP2-202ENST00000562363 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
SCAMP2-202ENST00000562363 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
SCAMP2-202ENST00000562363 IFT140Q96RY7 1462 aa21.76■■□□□ 1.07
SCAMP2-202ENST00000562363 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
SCAMP2-202ENST00000562363 TOPBP1Q92547 1522 aa21.7■■□□□ 1.07
SCAMP2-202ENST00000562363 RIMBP3CA6NJZ7 1639 aa21.7■■□□□ 1.06
SCAMP2-202ENST00000562363 RIMBP3BA6NNM3 1639 aa21.7■■□□□ 1.06
SCAMP2-202ENST00000562363 RIMBP3Q9UFD9 1639 aa21.7■■□□□ 1.06
SCAMP2-202ENST00000562363 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
SCAMP2-202ENST00000562363 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
SCAMP2-202ENST00000562363 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
SCAMP2-202ENST00000562363 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
SCAMP2-202ENST00000562363 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
SCAMP2-202ENST00000562363 CHD1O14646 1710 aa21.52■■□□□ 1.04
SCAMP2-202ENST00000562363 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.036e-8■■■■□ 19.9
SCAMP2-202ENST00000562363 POLA1P09884 1462 aaPredicted RBP21.48■■□□□ 1.03
SCAMP2-202ENST00000562363 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
SCAMP2-202ENST00000562363 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.02
SCAMP2-202ENST00000562363 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
SCAMP2-202ENST00000562363 FBLN2P98095 1184 aa21.38■■□□□ 1.01
SCAMP2-202ENST00000562363 SOGA1O94964 1423 aa21.34■■□□□ 1.01
SCAMP2-202ENST00000562363 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
SCAMP2-202ENST00000562363 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
SCAMP2-202ENST00000562363 WDR97A6NE52 1622 aa21.32■■□□□ 1
SCAMP2-202ENST00000562363 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
SCAMP2-202ENST00000562363 CUX1P39880 1505 aa21.27■■□□□ 1
SCAMP2-202ENST00000562363 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
SCAMP2-202ENST00000562363 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
SCAMP2-202ENST00000562363 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
SCAMP2-202ENST00000562363 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
SCAMP2-202ENST00000562363 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
SCAMP2-202ENST00000562363 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
SCAMP2-202ENST00000562363 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
SCAMP2-202ENST00000562363 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
SCAMP2-202ENST00000562363 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
SCAMP2-202ENST00000562363 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
SCAMP2-202ENST00000562363 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
SCAMP2-202ENST00000562363 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
SCAMP2-202ENST00000562363 ADAMTS12P58397 1594 aa20.94■□□□□ 0.94
SCAMP2-202ENST00000562363 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
SCAMP2-202ENST00000562363 ERCC6L2Q5T890 1561 aa20.91■□□□□ 0.94
SCAMP2-202ENST00000562363 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
SCAMP2-202ENST00000562363 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.94
SCAMP2-202ENST00000562363 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
SCAMP2-202ENST00000562363 TOP2BQ02880 1626 aa20.88■□□□□ 0.93
SCAMP2-202ENST00000562363 NUP160Q12769 1436 aa20.87■□□□□ 0.93
SCAMP2-202ENST00000562363 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
SCAMP2-202ENST00000562363 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
SCAMP2-202ENST00000562363 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
SCAMP2-202ENST00000562363 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
SCAMP2-202ENST00000562363 PRG4Q92954 1404 aaPredicted RBP20.68■□□□□ 0.9
SCAMP2-202ENST00000562363 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
SCAMP2-202ENST00000562363 KIF13AQ9H1H9 1805 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms