RNA–Protein interactions for RNA: ENST00000565345.5

SCAMP2-206, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-206ENST00000565345 NISCHQ9Y2I1 1504 aa47.1■■■■■ 5.13
SCAMP2-206ENST00000565345 CCDC180Q9P1Z9 1646 aa42.13■■■■■ 4.33
SCAMP2-206ENST00000565345 ABCC9O60706 1549 aa41.56■■■■■ 4.24
SCAMP2-206ENST00000565345 RB1CC1Q8TDY2 1594 aa39.84■■■■□ 3.97
SCAMP2-206ENST00000565345 NACADO15069 1562 aa39.71■■■■□ 3.95
SCAMP2-206ENST00000565345 DCAF8L2P0C7V8 631 aa39.39■■■■□ 3.9
SCAMP2-206ENST00000565345 MYO15BQ96JP2 1530 aa39.39■■■■□ 3.9
SCAMP2-206ENST00000565345 ZCCHC6Q5VYS8 1495 aaKnown RBP39.14■■■■□ 3.86
SCAMP2-206ENST00000565345 DCAF1Q9Y4B6 1507 aa39.01■■■■□ 3.84
SCAMP2-206ENST00000565345 UNC13AQ9UPW8 1703 aa38.92■■■■□ 3.82
SCAMP2-206ENST00000565345 PABPN1Q86U42 306 aaKnown RBP eCLIP38.72■■■■□ 3.79
SCAMP2-206ENST00000565345 BICRAQ9NZM4 1560 aa38.66■■■■□ 3.78
SCAMP2-206ENST00000565345 DNAJC5BQ9UF47 199 aa38.59■■■■□ 3.77
SCAMP2-206ENST00000565345 SHROOM4Q9ULL8 1493 aa38.29■■■■□ 3.72
SCAMP2-206ENST00000565345 SCRIBQ14160 1630 aa38.28■■■■□ 3.72
SCAMP2-206ENST00000565345 EIF4G1Q04637 1599 aaKnown RBP37.67■■■■□ 3.62
SCAMP2-206ENST00000565345 CC2D2AQ9P2K1 1620 aa37.61■■■■□ 3.61
SCAMP2-206ENST00000565345 CECR2Q9BXF3 1484 aa37.44■■■■□ 3.58
SCAMP2-206ENST00000565345 NCAPD3P42695 1498 aa36.66■■■■□ 3.46
SCAMP2-206ENST00000565345 SMARCA4P51532 1647 aa36.64■■■■□ 3.46
SCAMP2-206ENST00000565345 ATAD2BQ9ULI0 1458 aa36.56■■■■□ 3.44
SCAMP2-206ENST00000565345 BAZ1AQ9NRL2 1556 aaPredicted RBP36.54■■■■□ 3.44
SCAMP2-206ENST00000565345 SMARCA2P51531 1590 aa36.51■■■■□ 3.44
SCAMP2-206ENST00000565345 HMGXB3Q12766 1538 aa36.43■■■■□ 3.42
SCAMP2-206ENST00000565345 PEG3Q9GZU2 1588 aa36.35■■■■□ 3.41
SCAMP2-206ENST00000565345 MROH2BQ7Z745 1585 aa36.26■■■■□ 3.39
SCAMP2-206ENST00000565345 BAZ1BQ9UIG0 1483 aaKnown RBP36.21■■■■□ 3.39
SCAMP2-206ENST00000565345 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
SCAMP2-206ENST00000565345 NESP48681 1621 aa35.83■■■■□ 3.33
SCAMP2-206ENST00000565345 WIZO95785 1651 aa35.83■■■■□ 3.33
SCAMP2-206ENST00000565345 LAMC3Q9Y6N6 1575 aa35.75■■■■□ 3.31
SCAMP2-206ENST00000565345 CUX2O14529 1486 aa35.74■■■■□ 3.31
SCAMP2-206ENST00000565345 RSF1Q96T23 1441 aaPredicted RBP35.68■■■■□ 3.3
SCAMP2-206ENST00000565345 CADPSQ9ULU8 1353 aa35.52■■■■□ 3.28
SCAMP2-206ENST00000565345 PDS5BQ9NTI5 1447 aa35.5■■■■□ 3.27
SCAMP2-206ENST00000565345 TOP2AP11388 1531 aaKnown RBP35.46■■■■□ 3.27
SCAMP2-206ENST00000565345 THOC2Q8NI27 1593 aaKnown RBP35.45■■■■□ 3.27
SCAMP2-206ENST00000565345 KIF21AQ7Z4S6 1674 aa35.42■■■■□ 3.26
SCAMP2-206ENST00000565345 CFTRP13569 1480 aa35.23■■■■□ 3.23
SCAMP2-206ENST00000565345 DNAJC5Q9H3Z4 198 aa35.18■■■■□ 3.22
SCAMP2-206ENST00000565345 MRC2Q9UBG0 1479 aa35.16■■■■□ 3.22
SCAMP2-206ENST00000565345 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
SCAMP2-206ENST00000565345 FANCD2Q9BXW9 1451 aa35.09■■■■□ 3.21
SCAMP2-206ENST00000565345 WDR62O43379 1518 aa35.08■■■■□ 3.21
SCAMP2-206ENST00000565345 CCDC88BA6NC98 1476 aa35.02■■■■□ 3.2
SCAMP2-206ENST00000565345 PRDM2Q13029 1718 aa34.93■■■■□ 3.18
SCAMP2-206ENST00000565345 URB2Q14146 1524 aaKnown RBP34.77■■■■□ 3.16
SCAMP2-206ENST00000565345 ABCC8Q09428 1581 aa34.51■■■■□ 3.12
SCAMP2-206ENST00000565345 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
SCAMP2-206ENST00000565345 DNMBPQ6XZF7 1577 aa34.42■■■■□ 3.1
SCAMP2-206ENST00000565345 IFT140Q96RY7 1462 aa34.4■■■■□ 3.1
SCAMP2-206ENST00000565345 SUPT5HO00267 1087 aaKnown RBP34.3■■■■□ 3.08
SCAMP2-206ENST00000565345 ZNF608Q9ULD9 1512 aaPredicted RBP34.25■■■■□ 3.07
SCAMP2-206ENST00000565345 POLA1P09884 1462 aaPredicted RBP34.17■■■■□ 3.06
SCAMP2-206ENST00000565345 TARBP1Q13395 1621 aaKnown RBP34.17■■■■□ 3.06
SCAMP2-206ENST00000565345 OSCARQ8IYS5 282 aa34.13■■■■□ 3.05
SCAMP2-206ENST00000565345 EIF4G3O43432 1585 aaKnown RBP34.11■■■■□ 3.05
SCAMP2-206ENST00000565345 CUX1P39880 1505 aa34.04■■■■□ 3.04
SCAMP2-206ENST00000565345 SOGA1O94964 1423 aa34■■■■□ 3.03
SCAMP2-206ENST00000565345 FGD5Q6ZNL6 1462 aa34■■■■□ 3.03
SCAMP2-206ENST00000565345 AQRO60306 1485 aaKnown RBP eCLIP33.99■■■■□ 3.036e-8■■■■□ 19.9
SCAMP2-206ENST00000565345 RAD54L2Q9Y4B4 1467 aa33.98■■■■□ 3.03
SCAMP2-206ENST00000565345 WDR97A6NE52 1622 aa33.93■■■■□ 3.02
SCAMP2-206ENST00000565345 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
SCAMP2-206ENST00000565345 CHD1O14646 1710 aa33.76■■■■□ 3
SCAMP2-206ENST00000565345 TRIM41Q8WV44 630 aa33.69■■■□□ 2.98
SCAMP2-206ENST00000565345 GRIN2BQ13224 1484 aa33.69■■■□□ 2.98
SCAMP2-206ENST00000565345 ABCA10Q8WWZ4 1543 aa33.68■■■□□ 2.98
SCAMP2-206ENST00000565345 SNAPC4Q5SXM2 1469 aa33.67■■■□□ 2.98
SCAMP2-206ENST00000565345 BIVM-ERCC5R4GMW8 1640 aa33.67■■■□□ 2.98
SCAMP2-206ENST00000565345 MAGI1Q96QZ7 1491 aaPredicted RBP33.66■■■□□ 2.98
SCAMP2-206ENST00000565345 TOP2BQ02880 1626 aa33.65■■■□□ 2.98
SCAMP2-206ENST00000565345 WRNQ14191 1432 aaPredicted RBP eCLIP33.64■■■□□ 2.98
SCAMP2-206ENST00000565345 RIMBP3CA6NJZ7 1639 aa33.64■■■□□ 2.98
SCAMP2-206ENST00000565345 RIMBP3BA6NNM3 1639 aa33.64■■■□□ 2.98
SCAMP2-206ENST00000565345 RIMBP3Q9UFD9 1639 aa33.64■■■□□ 2.98
SCAMP2-206ENST00000565345 FBLN2P98095 1184 aa33.61■■■□□ 2.97
SCAMP2-206ENST00000565345 GAPVD1Q14C86 1478 aa33.61■■■□□ 2.97
SCAMP2-206ENST00000565345 ABCA5Q8WWZ7 1642 aa33.59■■■□□ 2.97
SCAMP2-206ENST00000565345 ARHGEF11O15085 1522 aa33.58■■■□□ 2.97
SCAMP2-206ENST00000565345 SYNJ1O43426 1573 aa33.58■■■□□ 2.97
SCAMP2-206ENST00000565345 PBRM1Q86U86 1689 aa33.57■■■□□ 2.96
SCAMP2-206ENST00000565345 SYNJ2O15056 1496 aa33.53■■■□□ 2.96
SCAMP2-206ENST00000565345 CHMP7Q8WUX9 453 aaPredicted RBP33.5■■■□□ 2.95
SCAMP2-206ENST00000565345 CLASP1Q7Z460 1538 aa33.43■■■□□ 2.94
SCAMP2-206ENST00000565345 ADAMTS12P58397 1594 aa33.28■■■□□ 2.92
SCAMP2-206ENST00000565345 ERICH3Q5RHP9 1530 aa33.28■■■□□ 2.92
SCAMP2-206ENST00000565345 ARAP1Q96P48 1450 aa33.27■■■□□ 2.92
SCAMP2-206ENST00000565345 CYB5RLQ6IPT4 315 aa33.25■■■□□ 2.91
SCAMP2-206ENST00000565345 GRIN2AQ12879 1464 aa33.25■■■□□ 2.91
SCAMP2-206ENST00000565345 FHAD1B1AJZ9 1412 aa33.22■■■□□ 2.91
SCAMP2-206ENST00000565345 NUP160Q12769 1436 aa33.14■■■□□ 2.9
SCAMP2-206ENST00000565345 CEP170Q5SW79 1584 aa33.09■■■□□ 2.89
SCAMP2-206ENST00000565345 KIF27Q86VH2 1401 aa32.99■■■□□ 2.87
SCAMP2-206ENST00000565345 SHROOM2Q13796 1616 aa32.96■■■□□ 2.87
SCAMP2-206ENST00000565345 IGF1RP08069 1367 aa32.92■■■□□ 2.86
SCAMP2-206ENST00000565345 CUL7Q14999 1698 aa32.88■■■□□ 2.85
SCAMP2-206ENST00000565345 ERCC6L2Q5T890 1561 aa32.87■■■□□ 2.85
SCAMP2-206ENST00000565345 RUSC2Q8N2Y8 1516 aa32.81■■■□□ 2.84
SCAMP2-206ENST00000565345 JPH4Q96JJ6 628 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms