Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 RPS2P52-201ENST00000469610 820 ntBASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 AC105020.6-201ENST00000621523 1217 ntBASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDND2Q8NHS1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDND2Q8NHS1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 GCSHP5-201ENST00000443090 522 ntBASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 AC073648.6-201ENST00000641589 218 ntBASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDND2Q8NHS1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDND2Q8NHS1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDND2Q8NHS1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDND2Q8NHS1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDND2Q8NHS1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDND2Q8NHS1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDND2Q8NHS1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms