RNA–Protein interactions for RNA: ENST00000487418.6

IVD-206, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IVD, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-206ENST00000487418 NISCHQ9Y2I1 1504 aa48.25■■■■■ 5.31
IVD-206ENST00000487418 CCDC180Q9P1Z9 1646 aa42.36■■■■■ 4.37
IVD-206ENST00000487418 ABCC9O60706 1549 aa40.54■■■■■ 4.08
IVD-206ENST00000487418 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
IVD-206ENST00000487418 DCAF8L2P0C7V8 631 aa39.98■■■■□ 3.99
IVD-206ENST00000487418 DCAF1Q9Y4B6 1507 aa39.9■■■■□ 3.98
IVD-206ENST00000487418 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
IVD-206ENST00000487418 NACADO15069 1562 aa39.58■■■■□ 3.93
IVD-206ENST00000487418 RB1CC1Q8TDY2 1594 aa39.37■■■■□ 3.89
IVD-206ENST00000487418 SHROOM4Q9ULL8 1493 aa38.89■■■■□ 3.82
IVD-206ENST00000487418 SCRIBQ14160 1630 aa38.83■■■■□ 3.81
IVD-206ENST00000487418 UNC13AQ9UPW8 1703 aa38.61■■■■□ 3.77
IVD-206ENST00000487418 BICRAQ9NZM4 1560 aa38.23■■■■□ 3.71
IVD-206ENST00000487418 PABPN1Q86U42 306 aaKnown RBP eCLIP38.11■■■■□ 3.69
IVD-206ENST00000487418 CECR2Q9BXF3 1484 aa37.54■■■■□ 3.6
IVD-206ENST00000487418 BAZ1AQ9NRL2 1556 aaPredicted RBP37.28■■■■□ 3.56
IVD-206ENST00000487418 MROH2BQ7Z745 1585 aa37.25■■■■□ 3.55
IVD-206ENST00000487418 SMARCA4P51532 1647 aa37.21■■■■□ 3.55
IVD-206ENST00000487418 RSF1Q96T23 1441 aaPredicted RBP37.19■■■■□ 3.54
IVD-206ENST00000487418 SUPT5HO00267 1087 aaKnown RBP37.13■■■■□ 3.53
IVD-206ENST00000487418 EIF4G1Q04637 1599 aaKnown RBP37.09■■■■□ 3.53
IVD-206ENST00000487418 WIZO95785 1651 aa36.93■■■■□ 3.5
IVD-206ENST00000487418 PEG3Q9GZU2 1588 aa36.8■■■■□ 3.48
IVD-206ENST00000487418 ATAD2BQ9ULI0 1458 aa36.74■■■■□ 3.47
IVD-206ENST00000487418 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
IVD-206ENST00000487418 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
IVD-206ENST00000487418 NCAPD3P42695 1498 aa36.54■■■■□ 3.44
IVD-206ENST00000487418 TOP2AP11388 1531 aaKnown RBP36.51■■■■□ 3.43
IVD-206ENST00000487418 BAZ1BQ9UIG0 1483 aaKnown RBP36.48■■■■□ 3.43
IVD-206ENST00000487418 HMGXB3Q12766 1538 aa36.42■■■■□ 3.42
IVD-206ENST00000487418 DNAJC5BQ9UF47 199 aa36.34■■■■□ 3.41
IVD-206ENST00000487418 CCDC88BA6NC98 1476 aa36.14■■■■□ 3.38
IVD-206ENST00000487418 CFTRP13569 1480 aa35.55■■■■□ 3.28
IVD-206ENST00000487418 CADPSQ9ULU8 1353 aa35.54■■■■□ 3.28
IVD-206ENST00000487418 NESP48681 1621 aa35.43■■■■□ 3.26
IVD-206ENST00000487418 LAMC3Q9Y6N6 1575 aa35.38■■■■□ 3.25
IVD-206ENST00000487418 PRDM2Q13029 1718 aa35.37■■■■□ 3.25
IVD-206ENST00000487418 CHIC1Q5VXU3 224 aa35.27■■■■□ 3.24
IVD-206ENST00000487418 ABCC8Q09428 1581 aa35.17■■■■□ 3.22
IVD-206ENST00000487418 FANCD2Q9BXW9 1451 aa35.13■■■■□ 3.22
IVD-206ENST00000487418 PDS5BQ9NTI5 1447 aa35.1■■■■□ 3.21
IVD-206ENST00000487418 KIF21AQ7Z4S6 1674 aa35.02■■■■□ 3.2
IVD-206ENST00000487418 WRNQ14191 1432 aaPredicted RBP eCLIP35.01■■■■□ 3.19
IVD-206ENST00000487418 CEP164Q9UPV0 1460 aa34.96■■■■□ 3.19
IVD-206ENST00000487418 TRIM41Q8WV44 630 aa34.96■■■■□ 3.19
IVD-206ENST00000487418 SYNJ1O43426 1573 aa34.91■■■■□ 3.18
IVD-206ENST00000487418 CUX1P39880 1505 aa34.87■■■■□ 3.17
IVD-206ENST00000487418 TOP2BQ02880 1626 aa34.82■■■■□ 3.16
IVD-206ENST00000487418 BIVM-ERCC5R4GMW8 1640 aa34.8■■■■□ 3.16
IVD-206ENST00000487418 ERCC6Q03468 1493 aa34.79■■■■□ 3.16
IVD-206ENST00000487418 URB2Q14146 1524 aaKnown RBP34.75■■■■□ 3.15
IVD-206ENST00000487418 DNMBPQ6XZF7 1577 aa34.73■■■■□ 3.15
IVD-206ENST00000487418 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
IVD-206ENST00000487418 MRC2Q9UBG0 1479 aa34.69■■■■□ 3.14
IVD-206ENST00000487418 THOC2Q8NI27 1593 aaKnown RBP34.58■■■■□ 3.13
IVD-206ENST00000487418 FGD5Q6ZNL6 1462 aa34.56■■■■□ 3.12
IVD-206ENST00000487418 WDR62O43379 1518 aa34.54■■■■□ 3.12
IVD-206ENST00000487418 POLA1P09884 1462 aaPredicted RBP34.48■■■■□ 3.11
IVD-206ENST00000487418 SOGA1O94964 1423 aa34.39■■■■□ 3.1
IVD-206ENST00000487418 RAD54L2Q9Y4B4 1467 aa34.37■■■■□ 3.09
IVD-206ENST00000487418 RUSC2Q8N2Y8 1516 aa34.32■■■■□ 3.08
IVD-206ENST00000487418 CUX2O14529 1486 aa34.32■■■■□ 3.08
IVD-206ENST00000487418 FAM9AQ8IZU1 332 aaPredicted RBP34.29■■■■□ 3.08
IVD-206ENST00000487418 TARBP1Q13395 1621 aaKnown RBP34.26■■■■□ 3.07
IVD-206ENST00000487418 ABCA10Q8WWZ4 1543 aa34.25■■■■□ 3.07
IVD-206ENST00000487418 WDR97A6NE52 1622 aa34.22■■■■□ 3.07
IVD-206ENST00000487418 EEA1Q15075 1411 aa34.18■■■■□ 3.06
IVD-206ENST00000487418 IFT140Q96RY7 1462 aa34.17■■■■□ 3.06
IVD-206ENST00000487418 KIF27Q86VH2 1401 aa34.17■■■■□ 3.06
IVD-206ENST00000487418 TDRD9Q8NDG6 1382 aaKnown RBP34.08■■■■□ 3.05
IVD-206ENST00000487418 CSRNP3Q8WYN3 585 aa34.08■■■■□ 3.05
IVD-206ENST00000487418 ABCA5Q8WWZ7 1642 aa34.04■■■■□ 3.04
IVD-206ENST00000487418 ZNF608Q9ULD9 1512 aaPredicted RBP34.02■■■■□ 3.04
IVD-206ENST00000487418 AQRO60306 1485 aaKnown RBP eCLIP33.98■■■■□ 3.035e-6■■■■□ 20.4
IVD-206ENST00000487418 GAPVD1Q14C86 1478 aa33.98■■■■□ 3.03
IVD-206ENST00000487418 IGF1RP08069 1367 aa33.96■■■■□ 3.03
IVD-206ENST00000487418 LOC105371045A0A1W2PR82 267 aa33.9■■■■□ 3.02
IVD-206ENST00000487418 EIF4G3O43432 1585 aaKnown RBP33.89■■■■□ 3.02
IVD-206ENST00000487418 PBRM1Q86U86 1689 aa33.85■■■■□ 3.01
IVD-206ENST00000487418 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
IVD-206ENST00000487418 EHMT2Q96KQ7 1210 aa33.81■■■■□ 3
IVD-206ENST00000487418 PRXQ9BXM0 1461 aa33.81■■■■□ 3
IVD-206ENST00000487418 KIF21BO75037 1637 aa33.8■■■■□ 3
IVD-206ENST00000487418 GRIN2BQ13224 1484 aa33.79■■■■□ 3
IVD-206ENST00000487418 CARMIL1Q5VZK9 1371 aa33.76■■■□□ 2.99
IVD-206ENST00000487418 CUL7Q14999 1698 aa33.74■■■□□ 2.99
IVD-206ENST00000487418 RAPGEF2Q9Y4G8 1499 aa33.71■■■□□ 2.99
IVD-206ENST00000487418 GOLGA3Q08378 1498 aa33.68■■■□□ 2.98
IVD-206ENST00000487418 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
IVD-206ENST00000487418 ADAMTS12P58397 1594 aa33.62■■■□□ 2.97
IVD-206ENST00000487418 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
IVD-206ENST00000487418 MAGI1Q96QZ7 1491 aaPredicted RBP33.58■■■□□ 2.97
IVD-206ENST00000487418 UBTFP17480 764 aaKnown RBP33.56■■■□□ 2.96
IVD-206ENST00000487418 TNIKQ9UKE5 1360 aa33.49■■■□□ 2.95
IVD-206ENST00000487418 SYNJ2O15056 1496 aa33.46■■■□□ 2.95
IVD-206ENST00000487418 CHMP7Q8WUX9 453 aaPredicted RBP33.39■■■□□ 2.94
IVD-206ENST00000487418 GRIN2AQ12879 1464 aa33.38■■■□□ 2.93
IVD-206ENST00000487418 FBLN2P98095 1184 aa33.35■■■□□ 2.93
IVD-206ENST00000487418 CHD1O14646 1710 aa33.3■■■□□ 2.92
IVD-206ENST00000487418 CTTNBP2Q8WZ74 1663 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms