RNA–Protein interactions for RNA: ENST00000519106.1

CLDN23-201, Transcript of claudin 23, humanhuman

APPRIS P1 BASIC

Gene CLDN23, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23-201ENST00000519106 NISCHQ9Y2I1 1504 aa47.81■■■■■ 5.24
CLDN23-201ENST00000519106 CCDC180Q9P1Z9 1646 aa41.75■■■■■ 4.27
CLDN23-201ENST00000519106 ZCCHC6Q5VYS8 1495 aaKnown RBP40.08■■■■■ 4.01
CLDN23-201ENST00000519106 ABCC9O60706 1549 aa39.87■■■■□ 3.97
CLDN23-201ENST00000519106 DCAF8L2P0C7V8 631 aa39.77■■■■□ 3.96
CLDN23-201ENST00000519106 DCAF1Q9Y4B6 1507 aa39.46■■■■□ 3.91
CLDN23-201ENST00000519106 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
CLDN23-201ENST00000519106 NACADO15069 1562 aa38.99■■■■□ 3.83
CLDN23-201ENST00000519106 SHROOM4Q9ULL8 1493 aa38.95■■■■□ 3.83
CLDN23-201ENST00000519106 RB1CC1Q8TDY2 1594 aa38.74■■■■□ 3.79
CLDN23-201ENST00000519106 SCRIBQ14160 1630 aa38.47■■■■□ 3.75
CLDN23-201ENST00000519106 UNC13AQ9UPW8 1703 aa37.96■■■■□ 3.67
CLDN23-201ENST00000519106 PABPN1Q86U42 306 aaKnown RBP eCLIP37.61■■■■□ 3.61
CLDN23-201ENST00000519106 BICRAQ9NZM4 1560 aa37.58■■■■□ 3.61
CLDN23-201ENST00000519106 SUPT5HO00267 1087 aaKnown RBP37.35■■■■□ 3.57
CLDN23-201ENST00000519106 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
CLDN23-201ENST00000519106 RSF1Q96T23 1441 aaPredicted RBP37.01■■■■□ 3.52
CLDN23-201ENST00000519106 MROH2BQ7Z745 1585 aa36.96■■■■□ 3.51
CLDN23-201ENST00000519106 BAZ1AQ9NRL2 1556 aaPredicted RBP36.93■■■■□ 3.5
CLDN23-201ENST00000519106 SMARCA4P51532 1647 aa36.81■■■■□ 3.48
CLDN23-201ENST00000519106 WIZO95785 1651 aa36.65■■■■□ 3.46
CLDN23-201ENST00000519106 EIF4G1Q04637 1599 aaKnown RBP36.48■■■■□ 3.43
CLDN23-201ENST00000519106 PEG3Q9GZU2 1588 aa36.32■■■■□ 3.41
CLDN23-201ENST00000519106 ATAD2BQ9ULI0 1458 aa36.29■■■■□ 3.4
CLDN23-201ENST00000519106 SMARCA2P51531 1590 aa36.23■■■■□ 3.39
CLDN23-201ENST00000519106 TOP2AP11388 1531 aaKnown RBP36.2■■■■□ 3.39
CLDN23-201ENST00000519106 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
CLDN23-201ENST00000519106 CC2D2AQ9P2K1 1620 aa36.04■■■■□ 3.36
CLDN23-201ENST00000519106 NCAPD3P42695 1498 aa36■■■■□ 3.35
CLDN23-201ENST00000519106 HMGXB3Q12766 1538 aa35.9■■■■□ 3.34
CLDN23-201ENST00000519106 CCDC88BA6NC98 1476 aa35.89■■■■□ 3.34
CLDN23-201ENST00000519106 CHIC1Q5VXU3 224 aa35.54■■■■□ 3.28
CLDN23-201ENST00000519106 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
CLDN23-201ENST00000519106 CFTRP13569 1480 aa35.14■■■■□ 3.22
CLDN23-201ENST00000519106 CADPSQ9ULU8 1353 aa35.1■■■■□ 3.21
CLDN23-201ENST00000519106 TRIM41Q8WV44 630 aa35.1■■■■□ 3.21
CLDN23-201ENST00000519106 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
CLDN23-201ENST00000519106 NESP48681 1621 aa34.92■■■■□ 3.18
CLDN23-201ENST00000519106 PRDM2Q13029 1718 aa34.89■■■■□ 3.18
CLDN23-201ENST00000519106 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
CLDN23-201ENST00000519106 LAMC3Q9Y6N6 1575 aa34.81■■■■□ 3.16
CLDN23-201ENST00000519106 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
CLDN23-201ENST00000519106 SYNJ1O43426 1573 aa34.71■■■■□ 3.15
CLDN23-201ENST00000519106 PDS5BQ9NTI5 1447 aa34.59■■■■□ 3.13
CLDN23-201ENST00000519106 CUX1P39880 1505 aa34.56■■■■□ 3.12
CLDN23-201ENST00000519106 TOP2BQ02880 1626 aa34.56■■■■□ 3.12
CLDN23-201ENST00000519106 CEP164Q9UPV0 1460 aa34.51■■■■□ 3.11
CLDN23-201ENST00000519106 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.11
CLDN23-201ENST00000519106 FAM9AQ8IZU1 332 aaPredicted RBP34.5■■■■□ 3.11
CLDN23-201ENST00000519106 KIF21AQ7Z4S6 1674 aa34.45■■■■□ 3.11
CLDN23-201ENST00000519106 SOGA1O94964 1423 aa34.36■■■■□ 3.09
CLDN23-201ENST00000519106 DNMBPQ6XZF7 1577 aa34.31■■■■□ 3.08
CLDN23-201ENST00000519106 TOPBP1Q92547 1522 aa34.29■■■■□ 3.08
CLDN23-201ENST00000519106 URB2Q14146 1524 aaKnown RBP34.29■■■■□ 3.08
CLDN23-201ENST00000519106 RUSC2Q8N2Y8 1516 aa34.25■■■■□ 3.07
CLDN23-201ENST00000519106 LOC105371045A0A1W2PR82 267 aa34.24■■■■□ 3.07
CLDN23-201ENST00000519106 FGD5Q6ZNL6 1462 aa34.24■■■■□ 3.07
CLDN23-201ENST00000519106 ERCC6Q03468 1493 aa34.21■■■■□ 3.07
CLDN23-201ENST00000519106 EEA1Q15075 1411 aa34.15■■■■□ 3.06
CLDN23-201ENST00000519106 MRC2Q9UBG0 1479 aa34.14■■■■□ 3.06
CLDN23-201ENST00000519106 POLA1P09884 1462 aaPredicted RBP34.11■■■■□ 3.05
CLDN23-201ENST00000519106 EHMT2Q96KQ7 1210 aa34.09■■■■□ 3.05
CLDN23-201ENST00000519106 CSRNP3Q8WYN3 585 aa34.08■■■■□ 3.05
CLDN23-201ENST00000519106 RAD54L2Q9Y4B4 1467 aa34.04■■■■□ 3.04
CLDN23-201ENST00000519106 KIF27Q86VH2 1401 aa33.99■■■■□ 3.03
CLDN23-201ENST00000519106 CUX2O14529 1486 aa33.98■■■■□ 3.03
CLDN23-201ENST00000519106 WDR62O43379 1518 aa33.96■■■■□ 3.03
CLDN23-201ENST00000519106 THOC2Q8NI27 1593 aaKnown RBP33.92■■■■□ 3.02
CLDN23-201ENST00000519106 ABCA10Q8WWZ4 1543 aa33.9■■■■□ 3.02
CLDN23-201ENST00000519106 WDR97A6NE52 1622 aa33.78■■■■□ 3
CLDN23-201ENST00000519106 TARBP1Q13395 1621 aaKnown RBP33.78■■■■□ 3
CLDN23-201ENST00000519106 TDRD9Q8NDG6 1382 aaKnown RBP33.76■■■□□ 2.99
CLDN23-201ENST00000519106 IGF1RP08069 1367 aa33.73■■■□□ 2.99
CLDN23-201ENST00000519106 KIF21BO75037 1637 aa33.72■■■□□ 2.99
CLDN23-201ENST00000519106 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
CLDN23-201ENST00000519106 IFT140Q96RY7 1462 aa33.68■■■□□ 2.98
CLDN23-201ENST00000519106 UBTFP17480 764 aaKnown RBP33.67■■■□□ 2.98
CLDN23-201ENST00000519106 PRXQ9BXM0 1461 aa33.67■■■□□ 2.98
CLDN23-201ENST00000519106 RAPGEF2Q9Y4G8 1499 aa33.66■■■□□ 2.98
CLDN23-201ENST00000519106 ABCA5Q8WWZ7 1642 aa33.63■■■□□ 2.97
CLDN23-201ENST00000519106 GAPVD1Q14C86 1478 aa33.63■■■□□ 2.97
CLDN23-201ENST00000519106 AQRO60306 1485 aaKnown RBP eCLIP33.58■■■□□ 2.97
CLDN23-201ENST00000519106 ZNF608Q9ULD9 1512 aaPredicted RBP33.57■■■□□ 2.96
CLDN23-201ENST00000519106 CARMIL1Q5VZK9 1371 aa33.56■■■□□ 2.96
CLDN23-201ENST00000519106 ERICH3Q5RHP9 1530 aa33.54■■■□□ 2.96
CLDN23-201ENST00000519106 TNIKQ9UKE5 1360 aa33.54■■■□□ 2.96
CLDN23-201ENST00000519106 CUL7Q14999 1698 aa33.44■■■□□ 2.94
CLDN23-201ENST00000519106 PBRM1Q86U86 1689 aa33.42■■■□□ 2.94
CLDN23-201ENST00000519106 EIF4G3O43432 1585 aaKnown RBP33.4■■■□□ 2.94
CLDN23-201ENST00000519106 GRIN2BQ13224 1484 aa33.39■■■□□ 2.94
CLDN23-201ENST00000519106 CEP162Q5TB80 1403 aa33.37■■■□□ 2.93
CLDN23-201ENST00000519106 RANGAP1P46060 587 aaPredicted RBP33.28■■■□□ 2.92
CLDN23-201ENST00000519106 FHAD1B1AJZ9 1412 aa33.24■■■□□ 2.91
CLDN23-201ENST00000519106 SNAPC4Q5SXM2 1469 aa33.22■■■□□ 2.91
CLDN23-201ENST00000519106 ADAMTS12P58397 1594 aa33.22■■■□□ 2.91
CLDN23-201ENST00000519106 CLIP1P30622 1438 aa33.18■■■□□ 2.9
CLDN23-201ENST00000519106 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
CLDN23-201ENST00000519106 CTTNBP2Q8WZ74 1663 aa33.03■■■□□ 2.88
CLDN23-201ENST00000519106 FBLN2P98095 1184 aa33.03■■■□□ 2.88
CLDN23-201ENST00000519106 CHMP7Q8WUX9 453 aaPredicted RBP33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms