Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.138e-11■■□□□ 13.9
LSM11P83369 RPL13-211ENST00000563270 554 ntTSL 413.54□□□□□ -0.248e-11■■□□□ 13.9
LSM11P83369 RPL13-207ENST00000484610 924 ntTSL 513.28□□□□□ -0.288e-11■■□□□ 13.9
LSM11P83369 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.22□□□□□ -0.298e-11■■□□□ 13.9
LSM11P83369 RPL13-210ENST00000562879 958 ntTSL 1 (best)13.18□□□□□ -0.38e-11■■□□□ 13.9
LSM11P83369 RPL13-213ENST00000565571 568 ntTSL 212.38□□□□□ -0.438e-11■■□□□ 13.9
LSM11P83369 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.628e-11■■□□□ 13.9
LSM11P83369 GPI-212ENST00000589985 1516 ntTSL 317.73■□□□□ 0.431e-12■■□□□ 13.9
LSM11P83369 PRKAR2B-202ENST00000393613 642 ntTSL 310.16□□□□□ -0.781e-12■■□□□ 13.9
LSM11P83369 PRKAR2B-203ENST00000488792 609 ntTSL 39.46□□□□□ -0.91e-12■■□□□ 13.9
LSM11P83369 DAZAP1-209ENST00000590419 508 ntTSL 312.67□□□□□ -0.383e-8■■□□□ 13.9
LSM11P83369 TFR2-212ENST00000476304 2421 ntTSL 516.14■□□□□ 0.173e-6■■□□□ 13.9
LSM11P83369 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.18■□□□□ 0.023e-6■■□□□ 13.9
LSM11P83369 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.23e-6■■□□□ 13.9
LSM11P83369 TFR2-206ENST00000465294 2763 ntTSL 212.84□□□□□ -0.353e-6■■□□□ 13.9
LSM11P83369 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.363e-6■■□□□ 13.9
LSM11P83369 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.013e-10■■□□□ 13.9
LSM11P83369 CDK18-211ENST00000489617 3190 ntTSL 1 (best)10.5□□□□□ -0.733e-10■■□□□ 13.9
LSM11P83369 CDK18-222ENST00000515494 3756 ntTSL 1 (best)9.86□□□□□ -0.833e-10■■□□□ 13.9
LSM11P83369 SLC35C2-212ENST00000493599 2510 ntTSL 213.16□□□□□ -0.32e-6■■□□□ 13.9
LSM11P83369 KAT2A-204ENST00000588759 404 ntTSL 58.55□□□□□ -1.044e-9■■□□□ 13.9
LSM11P83369 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.159e-12■■□□□ 13.9
LSM11P83369 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.47□□□□□ -0.419e-12■■□□□ 13.9
LSM11P83369 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.72■□□□□ 0.432e-6■■□□□ 13.8
LSM11P83369 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.32e-6■■□□□ 13.8
LSM11P83369 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.465e-7■■□□□ 13.8
LSM11P83369 RGL2-245ENST00000491168 2316 ntTSL 216.22■□□□□ 0.195e-7■■□□□ 13.8
LSM11P83369 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.15e-7■■□□□ 13.8
LSM11P83369 RGL2-243ENST00000483151 2772 ntTSL 214.17□□□□□ -0.145e-7■■□□□ 13.8
LSM11P83369 RGL2-238ENST00000437840 2687 ntTSL 1 (best)13.98□□□□□ -0.175e-7■■□□□ 13.8
LSM11P83369 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.058e-15■■□□□ 13.8
LSM11P83369 PTEN-204ENST00000487939 477 ntTSL 310.57□□□□□ -0.728e-15■■□□□ 13.8
LSM11P83369 PTEN-202ENST00000462694 383 ntTSL 210.2□□□□□ -0.788e-15■■□□□ 13.8
LSM11P83369 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.462e-6■■□□□ 13.8
LSM11P83369 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC10.6□□□□□ -0.712e-6■■□□□ 13.8
LSM11P83369 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.67□□□□□ -1.342e-6■■□□□ 13.8
LSM11P83369 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.45■□□□□ 0.221e-32■■□□□ 13.8
LSM11P83369 TERC-201ENST00000602385 541 ntBASIC15.42■□□□□ 0.061e-32■■□□□ 13.8
LSM11P83369 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.14e-9■■□□□ 13.8
LSM11P83369 LRRFIP1-212ENST00000483443 1069 ntTSL 312.25□□□□□ -0.454e-9■■□□□ 13.8
LSM11P83369 MIR939-201ENST00000401314 82 ntBASIC19.09■□□□□ 0.657e-13■■□□□ 13.8
LSM11P83369 SEPT9-227ENST00000590059 670 ntTSL 518.62■□□□□ 0.575e-6■■□□□ 13.8
LSM11P83369 SEPT9-219ENST00000588575 559 ntTSL 417.75■□□□□ 0.435e-6■■□□□ 13.8
LSM11P83369 SEPT9-215ENST00000586521 601 ntTSL 415.76■□□□□ 0.115e-6■■□□□ 13.8
LSM11P83369 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.73■□□□□ 0.115e-6■■□□□ 13.8
LSM11P83369 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.15e-6■■□□□ 13.8
LSM11P83369 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.33■□□□□ 0.045e-6■■□□□ 13.8
LSM11P83369 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.38□□□□□ -0.115e-6■■□□□ 13.8
LSM11P83369 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.175e-6■■□□□ 13.8
LSM11P83369 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.57□□□□□ -0.245e-6■■□□□ 13.8
LSM11P83369 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.435e-6■■□□□ 13.8
LSM11P83369 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.05□□□□□ -0.485e-6■■□□□ 13.8
LSM11P83369 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.595e-6■■□□□ 13.8
LSM11P83369 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC11.14□□□□□ -0.635e-6■■□□□ 13.8
LSM11P83369 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC10.87□□□□□ -0.675e-6■■□□□ 13.8
LSM11P83369 SEPT9-235ENST00000591020 582 ntTSL 49.8□□□□□ -0.845e-6■■□□□ 13.8
LSM11P83369 AL365205.1-201ENST00000456057 3947 ntTSL 215.49■□□□□ 0.071e-6■■□□□ 13.8
LSM11P83369 AL365205.1-203ENST00000335515 2871 ntTSL 213.21□□□□□ -0.31e-6■■□□□ 13.8
LSM11P83369 AL365205.1-202ENST00000487182 3043 ntTSL 212□□□□□ -0.491e-6■■□□□ 13.8
LSM11P83369 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.881e-12■■□□□ 13.8
LSM11P83369 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.191e-12■■□□□ 13.8
LSM11P83369 CCNL2-213ENST00000481223 2815 ntTSL 217.49■□□□□ 0.394e-9■■□□□ 13.8
LSM11P83369 CCNL2-204ENST00000418865 3082 ntTSL 1 (best)9.68□□□□□ -0.864e-9■■□□□ 13.8
LSM11P83369 COL9A3-206ENST00000466532 539 ntTSL 216.66■□□□□ 0.266e-10■■□□□ 13.7
LSM11P83369 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.443e-9■■□□□ 13.7
LSM11P83369 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.84■□□□□ 0.133e-9■■□□□ 13.7
LSM11P83369 CCNL2-215ENST00000482621 2059 ntTSL 214.27□□□□□ -0.133e-9■■□□□ 13.7
LSM11P83369 CCNL2-218ENST00000496007 4452 ntTSL 212.9□□□□□ -0.343e-9■■□□□ 13.7
LSM11P83369 CCNL2-214ENST00000482365 2620 ntTSL 212.52□□□□□ -0.43e-9■■□□□ 13.7
LSM11P83369 CCNL2-211ENST00000480479 2792 ntTSL 211.77□□□□□ -0.533e-9■■□□□ 13.7
LSM11P83369 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.71■■□□□ 1.391e-6■■□□□ 13.7
LSM11P83369 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.951e-6■■□□□ 13.7
LSM11P83369 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.72e-9■■□□□ 13.7
LSM11P83369 CDH24-203ENST00000485922 2006 ntTSL 219.32■□□□□ 0.681e-6■■□□□ 13.7
LSM11P83369 HMG20B-213ENST00000488973 2434 ntTSL 1 (best)18.35■□□□□ 0.531e-6■■□□□ 13.7
LSM11P83369 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.441e-6■■□□□ 13.7
LSM11P83369 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.71■□□□□ 0.431e-6■■□□□ 13.7
LSM11P83369 OGFOD2-213ENST00000540324 1828 ntTSL 1 (best)17.6■□□□□ 0.411e-6■■□□□ 13.7
LSM11P83369 HMBS-212ENST00000542044 1544 ntTSL 517.59■□□□□ 0.412e-9■■□□□ 13.7
LSM11P83369 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.39■□□□□ 0.372e-9■■□□□ 13.7
LSM11P83369 CLCN7-213ENST00000567836 647 ntTSL 217.23■□□□□ 0.351e-6■■□□□ 13.7
LSM11P83369 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.87■□□□□ 0.291e-6■■□□□ 13.7
LSM11P83369 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.261e-6■■□□□ 13.7
LSM11P83369 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.251e-6■■□□□ 13.7
LSM11P83369 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.61■□□□□ 0.252e-9■■□□□ 13.7
LSM11P83369 HMBS-226ENST00000640813 1283 ntTSL 516.13■□□□□ 0.172e-9■■□□□ 13.7
LSM11P83369 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.9■□□□□ 0.142e-9■■□□□ 13.7
LSM11P83369 HMG20B-216ENST00000585900 741 ntTSL 315.72■□□□□ 0.111e-6■■□□□ 13.7
LSM11P83369 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.09■□□□□ 0.012e-9■■□□□ 13.7
LSM11P83369 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.07■□□□□ 01e-6■■□□□ 13.7
LSM11P83369 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.58□□□□□ -0.081e-6■■□□□ 13.7
LSM11P83369 HMBS-224ENST00000546226 2112 ntTSL 214.34□□□□□ -0.112e-9■■□□□ 13.7
LSM11P83369 GSE1-214ENST00000574293 777 ntTSL 313.83□□□□□ -0.21e-6■■□□□ 13.7
LSM11P83369 HMBS-219ENST00000544182 1542 ntTSL 213.2□□□□□ -0.32e-9■■□□□ 13.7
LSM11P83369 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.49□□□□□ -0.412e-9■■□□□ 13.7
LSM11P83369 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC11.83□□□□□ -0.521e-6■■□□□ 13.7
LSM11P83369 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC11.39□□□□□ -0.592e-9■■□□□ 13.7
LSM11P83369 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.25□□□□□ -0.612e-9■■□□□ 13.7
LSM11P83369 HMBS-217ENST00000543543 1796 ntTSL 510.03□□□□□ -0.82e-9■■□□□ 13.7
LSM11P83369 HMBS-210ENST00000539045 845 ntTSL 28.77□□□□□ -1.012e-9■■□□□ 13.7
Retrieved 100 of 11,495 protein–RNA pairs in 77.3 ms