RNA–Protein interactions for RNA: ENST00000462694.1

PTEN-202, Transcript of phosphatase and tensin homolog, humanhuman

TSL 2

Gene PTEN, Length 383 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-202ENST00000462694 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
PTEN-202ENST00000462694 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
PTEN-202ENST00000462694 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
PTEN-202ENST00000462694 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
PTEN-202ENST00000462694 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
PTEN-202ENST00000462694 FOXD1Q16676 465 aa18.33■□□□□ 0.52
PTEN-202ENST00000462694 ADRA2BP18089 450 aa17.69■□□□□ 0.42
PTEN-202ENST00000462694 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
PTEN-202ENST00000462694 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
PTEN-202ENST00000462694 MSH5O43196 834 aa16.93■□□□□ 0.3
PTEN-202ENST00000462694 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
PTEN-202ENST00000462694 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
PTEN-202ENST00000462694 KCNA4P22459 653 aa16.1■□□□□ 0.17
PTEN-202ENST00000462694 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
PTEN-202ENST00000462694 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
PTEN-202ENST00000462694 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
PTEN-202ENST00000462694 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
PTEN-202ENST00000462694 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
PTEN-202ENST00000462694 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
PTEN-202ENST00000462694 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
PTEN-202ENST00000462694 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
PTEN-202ENST00000462694 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
PTEN-202ENST00000462694 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
PTEN-202ENST00000462694 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
PTEN-202ENST00000462694 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
PTEN-202ENST00000462694 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
PTEN-202ENST00000462694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.03
PTEN-202ENST00000462694 ZBTB22O15209 634 aa14.81□□□□□ -0.04
PTEN-202ENST00000462694 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
PTEN-202ENST00000462694 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
PTEN-202ENST00000462694 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
PTEN-202ENST00000462694 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
PTEN-202ENST00000462694 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
PTEN-202ENST00000462694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
PTEN-202ENST00000462694 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
PTEN-202ENST00000462694 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
PTEN-202ENST00000462694 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
PTEN-202ENST00000462694 APLP2Q06481 763 aa14.26□□□□□ -0.13
PTEN-202ENST00000462694 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
PTEN-202ENST00000462694 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
PTEN-202ENST00000462694 CAPN15O75808 1086 aa14.18□□□□□ -0.14
PTEN-202ENST00000462694 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
PTEN-202ENST00000462694 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
PTEN-202ENST00000462694 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
PTEN-202ENST00000462694 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
PTEN-202ENST00000462694 ABCB7O75027 752 aa13.9□□□□□ -0.18
PTEN-202ENST00000462694 POLA2Q14181 598 aa13.83□□□□□ -0.2
PTEN-202ENST00000462694 DSG3P32926 999 aa13.78□□□□□ -0.2
PTEN-202ENST00000462694 FBLN2P98095 1184 aa13.59□□□□□ -0.23
PTEN-202ENST00000462694 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
PTEN-202ENST00000462694 FKBP8Q14318 412 aa13.53□□□□□ -0.24
PTEN-202ENST00000462694 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
PTEN-202ENST00000462694 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
PTEN-202ENST00000462694 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
PTEN-202ENST00000462694 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
PTEN-202ENST00000462694 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
PTEN-202ENST00000462694 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
PTEN-202ENST00000462694 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
PTEN-202ENST00000462694 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
PTEN-202ENST00000462694 PROM2Q8N271 834 aa13.09□□□□□ -0.31
PTEN-202ENST00000462694 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTEN-202ENST00000462694 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
PTEN-202ENST00000462694 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
PTEN-202ENST00000462694 AKT1S1Q96B36 256 aa13□□□□□ -0.33
PTEN-202ENST00000462694 AMER1Q5JTC6 1135 aaPredicted RBP12.9□□□□□ -0.34
PTEN-202ENST00000462694 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
PTEN-202ENST00000462694 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
PTEN-202ENST00000462694 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
PTEN-202ENST00000462694 VASPP50552 380 aaPredicted RBP12.81□□□□□ -0.36
PTEN-202ENST00000462694 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
PTEN-202ENST00000462694 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
PTEN-202ENST00000462694 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
PTEN-202ENST00000462694 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
PTEN-202ENST00000462694 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
PTEN-202ENST00000462694 IFNLR1Q8IU57 520 aaPredicted RBP12.63□□□□□ -0.39
PTEN-202ENST00000462694 PLCD3Q8N3E9 789 aa12.63□□□□□ -0.39
PTEN-202ENST00000462694 MIER1Q8N108 512 aa12.62□□□□□ -0.39
PTEN-202ENST00000462694 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
PTEN-202ENST00000462694 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
PTEN-202ENST00000462694 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
PTEN-202ENST00000462694 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
PTEN-202ENST00000462694 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
PTEN-202ENST00000462694 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.41
PTEN-202ENST00000462694 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
PTEN-202ENST00000462694 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTEN-202ENST00000462694 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
PTEN-202ENST00000462694 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTEN-202ENST00000462694 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
PTEN-202ENST00000462694 PKD2Q13563 968 aa12.32□□□□□ -0.44
PTEN-202ENST00000462694 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
PTEN-202ENST00000462694 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
PTEN-202ENST00000462694 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
PTEN-202ENST00000462694 POTEHQ6S545 545 aa12.21□□□□□ -0.45
PTEN-202ENST00000462694 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
PTEN-202ENST00000462694 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
PTEN-202ENST00000462694 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
PTEN-202ENST00000462694 HAX1O00165 279 aa12.17□□□□□ -0.46
PTEN-202ENST00000462694 NUBP1P53384 320 aa12.17□□□□□ -0.46
PTEN-202ENST00000462694 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
PTEN-202ENST00000462694 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms