RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-222ENST00000515494 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
CDK18-222ENST00000515494 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
CDK18-222ENST00000515494 DCAF8L2P0C7V8 631 aa19.57■□□□□ 0.72
CDK18-222ENST00000515494 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
CDK18-222ENST00000515494 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.68
CDK18-222ENST00000515494 ABCC9O60706 1549 aa19.17■□□□□ 0.66
CDK18-222ENST00000515494 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.59
CDK18-222ENST00000515494 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
CDK18-222ENST00000515494 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
CDK18-222ENST00000515494 NACADO15069 1562 aa18.52■□□□□ 0.56
CDK18-222ENST00000515494 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
CDK18-222ENST00000515494 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
CDK18-222ENST00000515494 PABPN1Q86U42 306 aaKnown RBP eCLIP18.25■□□□□ 0.511e-6■■□□□ 13.6
CDK18-222ENST00000515494 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.48
CDK18-222ENST00000515494 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
CDK18-222ENST00000515494 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
CDK18-222ENST00000515494 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
CDK18-222ENST00000515494 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
CDK18-222ENST00000515494 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
CDK18-222ENST00000515494 WIZO95785 1651 aa17.75■□□□□ 0.43
CDK18-222ENST00000515494 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
CDK18-222ENST00000515494 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
CDK18-222ENST00000515494 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
CDK18-222ENST00000515494 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
CDK18-222ENST00000515494 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.38
CDK18-222ENST00000515494 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
CDK18-222ENST00000515494 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
CDK18-222ENST00000515494 LOC105371045A0A1W2PR82 267 aa17.36■□□□□ 0.37
CDK18-222ENST00000515494 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
CDK18-222ENST00000515494 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
CDK18-222ENST00000515494 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
CDK18-222ENST00000515494 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
CDK18-222ENST00000515494 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
CDK18-222ENST00000515494 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
CDK18-222ENST00000515494 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
CDK18-222ENST00000515494 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
CDK18-222ENST00000515494 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
CDK18-222ENST00000515494 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
CDK18-222ENST00000515494 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
CDK18-222ENST00000515494 PELP1Q8IZL8 1130 aaKnown RBP16.88■□□□□ 0.29
CDK18-222ENST00000515494 PCGF6Q9BYE7 350 aa16.87■□□□□ 0.29
CDK18-222ENST00000515494 SOGA1O94964 1423 aa16.84■□□□□ 0.29
CDK18-222ENST00000515494 NESP48681 1621 aa16.84■□□□□ 0.29
CDK18-222ENST00000515494 CADPSQ9ULU8 1353 aa16.83■□□□□ 0.29
CDK18-222ENST00000515494 CFTRP13569 1480 aa16.83■□□□□ 0.28
CDK18-222ENST00000515494 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
CDK18-222ENST00000515494 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
CDK18-222ENST00000515494 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
CDK18-222ENST00000515494 CUX1P39880 1505 aa16.68■□□□□ 0.26
CDK18-222ENST00000515494 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
CDK18-222ENST00000515494 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
CDK18-222ENST00000515494 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
CDK18-222ENST00000515494 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
CDK18-222ENST00000515494 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
CDK18-222ENST00000515494 TRIM26Q12899 539 aaPredicted RBP16.59■□□□□ 0.25
CDK18-222ENST00000515494 EEA1Q15075 1411 aa16.58■□□□□ 0.24
CDK18-222ENST00000515494 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
CDK18-222ENST00000515494 HRCP23327 699 aa16.55■□□□□ 0.24
CDK18-222ENST00000515494 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
CDK18-222ENST00000515494 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
CDK18-222ENST00000515494 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
CDK18-222ENST00000515494 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.24
CDK18-222ENST00000515494 CEP162Q5TB80 1403 aa16.52■□□□□ 0.23
CDK18-222ENST00000515494 PDS5BQ9NTI5 1447 aa16.52■□□□□ 0.23
CDK18-222ENST00000515494 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
CDK18-222ENST00000515494 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
CDK18-222ENST00000515494 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
CDK18-222ENST00000515494 CUX2O14529 1486 aa16.48■□□□□ 0.23
CDK18-222ENST00000515494 GOLGA3Q08378 1498 aa16.48■□□□□ 0.23
CDK18-222ENST00000515494 TOPBP1Q92547 1522 aa16.47■□□□□ 0.23
CDK18-222ENST00000515494 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
CDK18-222ENST00000515494 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
CDK18-222ENST00000515494 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
CDK18-222ENST00000515494 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
CDK18-222ENST00000515494 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
CDK18-222ENST00000515494 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
CDK18-222ENST00000515494 MYT1Q01538 1121 aa16.4■□□□□ 0.22
CDK18-222ENST00000515494 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
CDK18-222ENST00000515494 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
CDK18-222ENST00000515494 KIF21BO75037 1637 aa16.37■□□□□ 0.21
CDK18-222ENST00000515494 IGF1RP08069 1367 aa16.35■□□□□ 0.21
CDK18-222ENST00000515494 CLIP1P30622 1438 aa16.31■□□□□ 0.2
CDK18-222ENST00000515494 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
CDK18-222ENST00000515494 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
CDK18-222ENST00000515494 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
CDK18-222ENST00000515494 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
CDK18-222ENST00000515494 AQRO60306 1485 aaKnown RBP eCLIP16.23■□□□□ 0.191e-7■■■□□ 16.7
CDK18-222ENST00000515494 P3H3Q8IVL6 736 aa16.22■□□□□ 0.19
CDK18-222ENST00000515494 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
CDK18-222ENST00000515494 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
CDK18-222ENST00000515494 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
CDK18-222ENST00000515494 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
CDK18-222ENST00000515494 TARBP1Q13395 1621 aaKnown RBP16.14■□□□□ 0.17
CDK18-222ENST00000515494 WDR62O43379 1518 aa16.12■□□□□ 0.17
CDK18-222ENST00000515494 APLP2Q06481 763 aa16.12■□□□□ 0.17
CDK18-222ENST00000515494 FBLN2P98095 1184 aa16.11■□□□□ 0.17
CDK18-222ENST00000515494 WDR97A6NE52 1622 aa16.11■□□□□ 0.17
CDK18-222ENST00000515494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
CDK18-222ENST00000515494 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
CDK18-222ENST00000515494 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms