RNA–Protein interactions for RNA: ENST00000567836.2

CLCN7-213, Transcript of chloride voltage-gated channel 7, humanhuman

TSL 2

Gene CLCN7, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN7-213ENST00000567836 NISCHQ9Y2I1 1504 aa49.55■■■■■ 5.52
CLCN7-213ENST00000567836 CCDC180Q9P1Z9 1646 aa44.32■■■■■ 4.68
CLCN7-213ENST00000567836 ABCC9O60706 1549 aa43.71■■■■■ 4.59
CLCN7-213ENST00000567836 RB1CC1Q8TDY2 1594 aa41.92■■■■■ 4.3
CLCN7-213ENST00000567836 NACADO15069 1562 aa41.79■■■■■ 4.28
CLCN7-213ENST00000567836 MYO15BQ96JP2 1530 aa41.46■■■■■ 4.23
CLCN7-213ENST00000567836 DCAF8L2P0C7V8 631 aa41.42■■■■■ 4.22
CLCN7-213ENST00000567836 ZCCHC6Q5VYS8 1495 aaKnown RBP41.18■■■■■ 4.18
CLCN7-213ENST00000567836 DCAF1Q9Y4B6 1507 aa41.07■■■■■ 4.16
CLCN7-213ENST00000567836 UNC13AQ9UPW8 1703 aa40.92■■■■■ 4.14
CLCN7-213ENST00000567836 PABPN1Q86U42 306 aaKnown RBP eCLIP40.72■■■■■ 4.11
CLCN7-213ENST00000567836 BICRAQ9NZM4 1560 aa40.66■■■■■ 4.1
CLCN7-213ENST00000567836 DNAJC5BQ9UF47 199 aa40.59■■■■■ 4.09
CLCN7-213ENST00000567836 SHROOM4Q9ULL8 1493 aa40.32■■■■■ 4.05
CLCN7-213ENST00000567836 SCRIBQ14160 1630 aa40.26■■■■■ 4.04
CLCN7-213ENST00000567836 EIF4G1Q04637 1599 aaKnown RBP39.63■■■■□ 3.93
CLCN7-213ENST00000567836 CC2D2AQ9P2K1 1620 aa39.57■■■■□ 3.92
CLCN7-213ENST00000567836 CECR2Q9BXF3 1484 aa39.38■■■■□ 3.9
CLCN7-213ENST00000567836 NCAPD3P42695 1498 aa38.58■■■■□ 3.77
CLCN7-213ENST00000567836 SMARCA4P51532 1647 aa38.54■■■■□ 3.76
CLCN7-213ENST00000567836 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
CLCN7-213ENST00000567836 BAZ1AQ9NRL2 1556 aaPredicted RBP38.44■■■■□ 3.74
CLCN7-213ENST00000567836 SMARCA2P51531 1590 aa38.42■■■■□ 3.74
CLCN7-213ENST00000567836 HMGXB3Q12766 1538 aa38.33■■■■□ 3.73
CLCN7-213ENST00000567836 PEG3Q9GZU2 1588 aa38.26■■■■□ 3.72
CLCN7-213ENST00000567836 MROH2BQ7Z745 1585 aa38.13■■■■□ 3.69
CLCN7-213ENST00000567836 BAZ1BQ9UIG0 1483 aaKnown RBP38.1■■■■□ 3.69
CLCN7-213ENST00000567836 ERCC6Q03468 1493 aa37.73■■■■□ 3.63
CLCN7-213ENST00000567836 NESP48681 1621 aa37.68■■■■□ 3.62
CLCN7-213ENST00000567836 WIZO95785 1651 aa37.66■■■■□ 3.62
CLCN7-213ENST00000567836 CUX2O14529 1486 aa37.62■■■■□ 3.61
CLCN7-213ENST00000567836 LAMC3Q9Y6N6 1575 aa37.61■■■■□ 3.61
CLCN7-213ENST00000567836 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
CLCN7-213ENST00000567836 CADPSQ9ULU8 1353 aa37.39■■■■□ 3.58
CLCN7-213ENST00000567836 PDS5BQ9NTI5 1447 aa37.36■■■■□ 3.57
CLCN7-213ENST00000567836 TOP2AP11388 1531 aaKnown RBP37.3■■■■□ 3.56
CLCN7-213ENST00000567836 THOC2Q8NI27 1593 aaKnown RBP37.29■■■■□ 3.56
CLCN7-213ENST00000567836 KIF21AQ7Z4S6 1674 aa37.24■■■■□ 3.55
CLCN7-213ENST00000567836 CFTRP13569 1480 aa37.07■■■■□ 3.53
CLCN7-213ENST00000567836 DNAJC5Q9H3Z4 198 aa37.02■■■■□ 3.52
CLCN7-213ENST00000567836 MRC2Q9UBG0 1479 aa36.99■■■■□ 3.51
CLCN7-213ENST00000567836 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
CLCN7-213ENST00000567836 WDR62O43379 1518 aa36.92■■■■□ 3.5
CLCN7-213ENST00000567836 FANCD2Q9BXW9 1451 aa36.92■■■■□ 3.5
CLCN7-213ENST00000567836 CCDC88BA6NC98 1476 aa36.84■■■■□ 3.49
CLCN7-213ENST00000567836 PRDM2Q13029 1718 aa36.73■■■■□ 3.47
CLCN7-213ENST00000567836 URB2Q14146 1524 aaKnown RBP36.58■■■■□ 3.45
CLCN7-213ENST00000567836 ABCC8Q09428 1581 aa36.32■■■■□ 3.4
CLCN7-213ENST00000567836 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
CLCN7-213ENST00000567836 DNMBPQ6XZF7 1577 aa36.21■■■■□ 3.39
CLCN7-213ENST00000567836 IFT140Q96RY7 1462 aa36.21■■■■□ 3.39
CLCN7-213ENST00000567836 SUPT5HO00267 1087 aaKnown RBP36.05■■■■□ 3.36
CLCN7-213ENST00000567836 ZNF608Q9ULD9 1512 aaPredicted RBP36.03■■■■□ 3.36
CLCN7-213ENST00000567836 TARBP1Q13395 1621 aaKnown RBP35.94■■■■□ 3.34
CLCN7-213ENST00000567836 POLA1P09884 1462 aaPredicted RBP35.94■■■■□ 3.34
CLCN7-213ENST00000567836 OSCARQ8IYS5 282 aa35.92■■■■□ 3.34
CLCN7-213ENST00000567836 EIF4G3O43432 1585 aaKnown RBP35.88■■■■□ 3.33
CLCN7-213ENST00000567836 CUX1P39880 1505 aa35.8■■■■□ 3.32
CLCN7-213ENST00000567836 SOGA1O94964 1423 aa35.77■■■■□ 3.32
CLCN7-213ENST00000567836 FGD5Q6ZNL6 1462 aa35.76■■■■□ 3.32
CLCN7-213ENST00000567836 AQRO60306 1485 aaKnown RBP eCLIP35.75■■■■□ 3.312e-7■■■■□ 20.5
CLCN7-213ENST00000567836 RAD54L2Q9Y4B4 1467 aa35.73■■■■□ 3.31
CLCN7-213ENST00000567836 WDR97A6NE52 1622 aa35.72■■■■□ 3.31
CLCN7-213ENST00000567836 TDRD9Q8NDG6 1382 aaKnown RBP35.6■■■■□ 3.29
CLCN7-213ENST00000567836 CHD1O14646 1710 aa35.49■■■■□ 3.27
CLCN7-213ENST00000567836 ABCA10Q8WWZ4 1543 aa35.45■■■■□ 3.27
CLCN7-213ENST00000567836 GRIN2BQ13224 1484 aa35.44■■■■□ 3.26
CLCN7-213ENST00000567836 MAGI1Q96QZ7 1491 aaPredicted RBP35.43■■■■□ 3.26
CLCN7-213ENST00000567836 TRIM41Q8WV44 630 aa35.43■■■■□ 3.26
CLCN7-213ENST00000567836 SNAPC4Q5SXM2 1469 aa35.41■■■■□ 3.26
CLCN7-213ENST00000567836 BIVM-ERCC5R4GMW8 1640 aa35.4■■■■□ 3.26
CLCN7-213ENST00000567836 WRNQ14191 1432 aaPredicted RBP eCLIP35.4■■■■□ 3.262e-6■■■■□ 22.3
CLCN7-213ENST00000567836 TOP2BQ02880 1626 aa35.39■■■■□ 3.26
CLCN7-213ENST00000567836 RIMBP3CA6NJZ7 1639 aa35.37■■■■□ 3.25
CLCN7-213ENST00000567836 RIMBP3BA6NNM3 1639 aa35.37■■■■□ 3.25
CLCN7-213ENST00000567836 RIMBP3Q9UFD9 1639 aa35.37■■■■□ 3.25
CLCN7-213ENST00000567836 GAPVD1Q14C86 1478 aa35.36■■■■□ 3.25
CLCN7-213ENST00000567836 FBLN2P98095 1184 aa35.35■■■■□ 3.25
CLCN7-213ENST00000567836 ARHGEF11O15085 1522 aa35.33■■■■□ 3.25
CLCN7-213ENST00000567836 ABCA5Q8WWZ7 1642 aa35.33■■■■□ 3.25
CLCN7-213ENST00000567836 SYNJ1O43426 1573 aa35.31■■■■□ 3.24
CLCN7-213ENST00000567836 PBRM1Q86U86 1689 aa35.29■■■■□ 3.24
CLCN7-213ENST00000567836 SYNJ2O15056 1496 aa35.28■■■■□ 3.24
CLCN7-213ENST00000567836 CHMP7Q8WUX9 453 aaPredicted RBP35.25■■■■□ 3.23
CLCN7-213ENST00000567836 CLASP1Q7Z460 1538 aa35.17■■■■□ 3.22
CLCN7-213ENST00000567836 ERICH3Q5RHP9 1530 aa35.02■■■■□ 3.2
CLCN7-213ENST00000567836 ADAMTS12P58397 1594 aa35.01■■■■□ 3.2
CLCN7-213ENST00000567836 ARAP1Q96P48 1450 aa35■■■■□ 3.19
CLCN7-213ENST00000567836 GRIN2AQ12879 1464 aa34.97■■■■□ 3.19
CLCN7-213ENST00000567836 CYB5RLQ6IPT4 315 aa34.97■■■■□ 3.19
CLCN7-213ENST00000567836 FHAD1B1AJZ9 1412 aa34.96■■■■□ 3.19
CLCN7-213ENST00000567836 NUP160Q12769 1436 aa34.88■■■■□ 3.17
CLCN7-213ENST00000567836 CEP170Q5SW79 1584 aa34.8■■■■□ 3.16
CLCN7-213ENST00000567836 KIF27Q86VH2 1401 aa34.72■■■■□ 3.15
CLCN7-213ENST00000567836 SHROOM2Q13796 1616 aa34.67■■■■□ 3.14
CLCN7-213ENST00000567836 IGF1RP08069 1367 aa34.64■■■■□ 3.14
CLCN7-213ENST00000567836 CUL7Q14999 1698 aa34.58■■■■□ 3.13
CLCN7-213ENST00000567836 ERCC6L2Q5T890 1561 aa34.57■■■■□ 3.12
CLCN7-213ENST00000567836 RUSC2Q8N2Y8 1516 aa34.51■■■■□ 3.12
CLCN7-213ENST00000567836 JPH4Q96JJ6 628 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms