RNA–Protein interactions for RNA: ENST00000542044.5

HMBS-212, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 5

Gene HMBS, Length 1,544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-212ENST00000542044 NISCHQ9Y2I1 1504 aa45.87■■■■■ 4.93
HMBS-212ENST00000542044 CCDC180Q9P1Z9 1646 aa40.42■■■■■ 4.06
HMBS-212ENST00000542044 ABCC9O60706 1549 aa38.88■■■■□ 3.81
HMBS-212ENST00000542044 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
HMBS-212ENST00000542044 DCAF8L2P0C7V8 631 aa38.16■■■■□ 3.7
HMBS-212ENST00000542044 DCAF1Q9Y4B6 1507 aa37.96■■■■□ 3.67
HMBS-212ENST00000542044 NACADO15069 1562 aa37.85■■■■□ 3.65
HMBS-212ENST00000542044 MYO15BQ96JP2 1530 aa37.83■■■■□ 3.65
HMBS-212ENST00000542044 RB1CC1Q8TDY2 1594 aa37.71■■■■□ 3.63
HMBS-212ENST00000542044 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
HMBS-212ENST00000542044 UNC13AQ9UPW8 1703 aa36.82■■■■□ 3.49
HMBS-212ENST00000542044 SHROOM4Q9ULL8 1493 aa36.79■■■■□ 3.48
HMBS-212ENST00000542044 BICRAQ9NZM4 1560 aa36.49■■■■□ 3.43
HMBS-212ENST00000542044 PABPN1Q86U42 306 aaKnown RBP eCLIP36.49■■■■□ 3.43
HMBS-212ENST00000542044 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
HMBS-212ENST00000542044 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.28
HMBS-212ENST00000542044 EIF4G1Q04637 1599 aaKnown RBP35.5■■■■□ 3.27
HMBS-212ENST00000542044 SMARCA4P51532 1647 aa35.42■■■■□ 3.26
HMBS-212ENST00000542044 MROH2BQ7Z745 1585 aa35.36■■■■□ 3.25
HMBS-212ENST00000542044 RSF1Q96T23 1441 aaPredicted RBP35.24■■■■□ 3.23
HMBS-212ENST00000542044 CC2D2AQ9P2K1 1620 aa35.17■■■■□ 3.22
HMBS-212ENST00000542044 SMARCA2P51531 1590 aa35.05■■■■□ 3.2
HMBS-212ENST00000542044 ATAD2BQ9ULI0 1458 aa35.05■■■■□ 3.2
HMBS-212ENST00000542044 SUPT5HO00267 1087 aaKnown RBP35.04■■■■□ 3.2
HMBS-212ENST00000542044 WIZO95785 1651 aa35.03■■■■□ 3.2
HMBS-212ENST00000542044 PEG3Q9GZU2 1588 aa35.03■■■■□ 3.2
HMBS-212ENST00000542044 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
HMBS-212ENST00000542044 NCAPD3P42695 1498 aa34.9■■■■□ 3.18
HMBS-212ENST00000542044 BAZ1BQ9UIG0 1483 aaKnown RBP34.83■■■■□ 3.17
HMBS-212ENST00000542044 HMGXB3Q12766 1538 aa34.8■■■■□ 3.16
HMBS-212ENST00000542044 TOP2AP11388 1531 aaKnown RBP34.7■■■■□ 3.15
HMBS-212ENST00000542044 CCDC88BA6NC98 1476 aa34.31■■■■□ 3.08
HMBS-212ENST00000542044 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
HMBS-212ENST00000542044 CFTRP13569 1480 aa33.89■■■■□ 3.02
HMBS-212ENST00000542044 LAMC3Q9Y6N6 1575 aa33.87■■■■□ 3.01
HMBS-212ENST00000542044 NESP48681 1621 aa33.85■■■■□ 3.01
HMBS-212ENST00000542044 PRDM2Q13029 1718 aa33.69■■■□□ 2.98
HMBS-212ENST00000542044 PDS5BQ9NTI5 1447 aa33.66■■■□□ 2.98
HMBS-212ENST00000542044 FANCD2Q9BXW9 1451 aa33.57■■■□□ 2.96
HMBS-212ENST00000542044 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
HMBS-212ENST00000542044 KIF21AQ7Z4S6 1674 aa33.46■■■□□ 2.95
HMBS-212ENST00000542044 CEP164Q9UPV0 1460 aa33.46■■■□□ 2.95
HMBS-212ENST00000542044 ABCC8Q09428 1581 aa33.29■■■□□ 2.92
HMBS-212ENST00000542044 MRC2Q9UBG0 1479 aa33.24■■■□□ 2.91
HMBS-212ENST00000542044 WRNQ14191 1432 aaPredicted RBP eCLIP33.24■■■□□ 2.91
HMBS-212ENST00000542044 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
HMBS-212ENST00000542044 THOC2Q8NI27 1593 aaKnown RBP33.14■■■□□ 2.9
HMBS-212ENST00000542044 CUX1P39880 1505 aa33.13■■■□□ 2.89
HMBS-212ENST00000542044 DNMBPQ6XZF7 1577 aa33.13■■■□□ 2.89
HMBS-212ENST00000542044 TOPBP1Q92547 1522 aa33.1■■■□□ 2.89
HMBS-212ENST00000542044 CHIC1Q5VXU3 224 aa33.1■■■□□ 2.89
HMBS-212ENST00000542044 SYNJ1O43426 1573 aa33.08■■■□□ 2.89
HMBS-212ENST00000542044 WDR62O43379 1518 aa33.07■■■□□ 2.88
HMBS-212ENST00000542044 TRIM41Q8WV44 630 aa33.05■■■□□ 2.88
HMBS-212ENST00000542044 TOP2BQ02880 1626 aa33.05■■■□□ 2.88
HMBS-212ENST00000542044 BIVM-ERCC5R4GMW8 1640 aa33.03■■■□□ 2.88
HMBS-212ENST00000542044 FGD5Q6ZNL6 1462 aa32.92■■■□□ 2.86
HMBS-212ENST00000542044 POLA1P09884 1462 aaPredicted RBP32.88■■■□□ 2.85
HMBS-212ENST00000542044 CUX2O14529 1486 aa32.79■■■□□ 2.84
HMBS-212ENST00000542044 SOGA1O94964 1423 aa32.79■■■□□ 2.84
HMBS-212ENST00000542044 RAD54L2Q9Y4B4 1467 aa32.74■■■□□ 2.83
HMBS-212ENST00000542044 IFT140Q96RY7 1462 aa32.72■■■□□ 2.83
HMBS-212ENST00000542044 TARBP1Q13395 1621 aaKnown RBP32.66■■■□□ 2.82
HMBS-212ENST00000542044 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
HMBS-212ENST00000542044 WDR97A6NE52 1622 aa32.56■■■□□ 2.8
HMBS-212ENST00000542044 TDRD9Q8NDG6 1382 aaKnown RBP32.51■■■□□ 2.79
HMBS-212ENST00000542044 KIF27Q86VH2 1401 aa32.5■■■□□ 2.79
HMBS-212ENST00000542044 ZNF608Q9ULD9 1512 aaPredicted RBP32.49■■■□□ 2.79
HMBS-212ENST00000542044 AQRO60306 1485 aaKnown RBP eCLIP32.43■■■□□ 2.788e-8■■■■■ 27.7
HMBS-212ENST00000542044 GAPVD1Q14C86 1478 aa32.41■■■□□ 2.78
HMBS-212ENST00000542044 RUSC2Q8N2Y8 1516 aa32.41■■■□□ 2.78
HMBS-212ENST00000542044 ABCA5Q8WWZ7 1642 aa32.41■■■□□ 2.78
HMBS-212ENST00000542044 EIF4G3O43432 1585 aaKnown RBP32.39■■■□□ 2.78
HMBS-212ENST00000542044 EEA1Q15075 1411 aa32.38■■■□□ 2.77
HMBS-212ENST00000542044 FAM9AQ8IZU1 332 aaPredicted RBP32.36■■■□□ 2.77
HMBS-212ENST00000542044 GRIN2BQ13224 1484 aa32.3■■■□□ 2.76
HMBS-212ENST00000542044 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
HMBS-212ENST00000542044 ERICH3Q5RHP9 1530 aa32.25■■■□□ 2.75
HMBS-212ENST00000542044 IGF1RP08069 1367 aa32.25■■■□□ 2.75
HMBS-212ENST00000542044 CSRNP3Q8WYN3 585 aa32.25■■■□□ 2.75
HMBS-212ENST00000542044 SNAPC4Q5SXM2 1469 aa32.15■■■□□ 2.74
HMBS-212ENST00000542044 MAGI1Q96QZ7 1491 aaPredicted RBP32.12■■■□□ 2.73
HMBS-212ENST00000542044 CUL7Q14999 1698 aa32.11■■■□□ 2.73
HMBS-212ENST00000542044 CARMIL1Q5VZK9 1371 aa32.1■■■□□ 2.73
HMBS-212ENST00000542044 FHAD1B1AJZ9 1412 aa32.06■■■□□ 2.72
HMBS-212ENST00000542044 ADAMTS12P58397 1594 aa32.05■■■□□ 2.72
HMBS-212ENST00000542044 PRXQ9BXM0 1461 aa32.02■■■□□ 2.72
HMBS-212ENST00000542044 SYNJ2O15056 1496 aa31.99■■■□□ 2.71
HMBS-212ENST00000542044 RAPGEF2Q9Y4G8 1499 aa31.99■■■□□ 2.71
HMBS-212ENST00000542044 FBLN2P98095 1184 aa31.98■■■□□ 2.71
HMBS-212ENST00000542044 CHMP7Q8WUX9 453 aaPredicted RBP31.98■■■□□ 2.71
HMBS-212ENST00000542044 KIF21BO75037 1637 aa31.95■■■□□ 2.71
HMBS-212ENST00000542044 EHMT2Q96KQ7 1210 aa31.9■■■□□ 2.7
HMBS-212ENST00000542044 GRIN2AQ12879 1464 aa31.87■■■□□ 2.69
HMBS-212ENST00000542044 GOLGA3Q08378 1498 aa31.86■■■□□ 2.69
HMBS-212ENST00000542044 CHD1O14646 1710 aa31.84■■■□□ 2.69
HMBS-212ENST00000542044 UBTFP17480 764 aaKnown RBP31.79■■■□□ 2.68
HMBS-212ENST00000542044 LOC105371045A0A1W2PR82 267 aa31.77■■■□□ 2.68
HMBS-212ENST00000542044 NUP160Q12769 1436 aa31.68■■■□□ 2.66
HMBS-212ENST00000542044 CEP170Q5SW79 1584 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms