RNA–Protein interactions for RNA: ENST00000485922.2

CDH24-203, Transcript of cadherin 24, humanhuman

TSL 2

Gene CDH24, Length 2,006 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-203ENST00000485922 NISCHQ9Y2I1 1504 aa44.3■■■■■ 4.68
CDH24-203ENST00000485922 CCDC180Q9P1Z9 1646 aa38.15■■■■□ 3.7
CDH24-203ENST00000485922 ZCCHC6Q5VYS8 1495 aaKnown RBP37.43■■■■□ 3.58
CDH24-203ENST00000485922 SHROOM4Q9ULL8 1493 aa36.83■■■■□ 3.49
CDH24-203ENST00000485922 DCAF1Q9Y4B6 1507 aa36.66■■■■□ 3.46
CDH24-203ENST00000485922 ABCC9O60706 1549 aa36.24■■■■□ 3.39
CDH24-203ENST00000485922 DCAF8L2P0C7V8 631 aa36.23■■■■□ 3.39
CDH24-203ENST00000485922 SUPT5HO00267 1087 aaKnown RBP35.97■■■■□ 3.35
CDH24-203ENST00000485922 MYO15BQ96JP2 1530 aa35.84■■■■□ 3.33
CDH24-203ENST00000485922 NACADO15069 1562 aa35.39■■■■□ 3.26
CDH24-203ENST00000485922 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
CDH24-203ENST00000485922 RB1CC1Q8TDY2 1594 aa35.16■■■■□ 3.22
CDH24-203ENST00000485922 CHIC1Q5VXU3 224 aa35■■■■□ 3.19
CDH24-203ENST00000485922 RSF1Q96T23 1441 aaPredicted RBP34.77■■■■□ 3.16
CDH24-203ENST00000485922 UNC13AQ9UPW8 1703 aa34.51■■■■□ 3.12
CDH24-203ENST00000485922 CECR2Q9BXF3 1484 aa34.32■■■■□ 3.08
CDH24-203ENST00000485922 MROH2BQ7Z745 1585 aa34.25■■■■□ 3.07
CDH24-203ENST00000485922 BICRAQ9NZM4 1560 aa34.2■■■■□ 3.07
CDH24-203ENST00000485922 PABPN1Q86U42 306 aaKnown RBP eCLIP34.17■■■■□ 3.06
CDH24-203ENST00000485922 BAZ1AQ9NRL2 1556 aaPredicted RBP34.13■■■■□ 3.05
CDH24-203ENST00000485922 WIZO95785 1651 aa34.03■■■■□ 3.04
CDH24-203ENST00000485922 SMARCA4P51532 1647 aa33.84■■■■□ 3.01
CDH24-203ENST00000485922 TRIM41Q8WV44 630 aa33.77■■■■□ 3
CDH24-203ENST00000485922 TOP2AP11388 1531 aaKnown RBP33.72■■■□□ 2.99
CDH24-203ENST00000485922 LOC105371045A0A1W2PR82 267 aa33.67■■■□□ 2.98
CDH24-203ENST00000485922 EIF4G1Q04637 1599 aaKnown RBP33.58■■■□□ 2.97
CDH24-203ENST00000485922 SMARCA2P51531 1590 aa33.43■■■□□ 2.94
CDH24-203ENST00000485922 PEG3Q9GZU2 1588 aa33.4■■■□□ 2.94
CDH24-203ENST00000485922 CCDC88BA6NC98 1476 aa33.39■■■□□ 2.94
CDH24-203ENST00000485922 PCGF6Q9BYE7 350 aa33.26■■■□□ 2.91
CDH24-203ENST00000485922 HRCP23327 699 aa33.18■■■□□ 2.9
CDH24-203ENST00000485922 FAM9AQ8IZU1 332 aaPredicted RBP33.14■■■□□ 2.9
CDH24-203ENST00000485922 TRIM26Q12899 539 aaPredicted RBP33.04■■■□□ 2.88
CDH24-203ENST00000485922 ATAD2BQ9ULI0 1458 aa33.02■■■□□ 2.88
CDH24-203ENST00000485922 ABCC8Q09428 1581 aa33■■■□□ 2.87
CDH24-203ENST00000485922 BAZ1BQ9UIG0 1483 aaKnown RBP32.9■■■□□ 2.86
CDH24-203ENST00000485922 EEA1Q15075 1411 aa32.82■■■□□ 2.84
CDH24-203ENST00000485922 CC2D2AQ9P2K1 1620 aa32.75■■■□□ 2.83
CDH24-203ENST00000485922 NCAPD3P42695 1498 aa32.71■■■□□ 2.83
CDH24-203ENST00000485922 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.835e-6■■■■■ 29.2
CDH24-203ENST00000485922 HMGXB3Q12766 1538 aa32.62■■■□□ 2.81
CDH24-203ENST00000485922 EHMT2Q96KQ7 1210 aa32.61■■■□□ 2.81
CDH24-203ENST00000485922 SOGA1O94964 1423 aa32.61■■■□□ 2.81
CDH24-203ENST00000485922 SYNJ1O43426 1573 aa32.5■■■□□ 2.79
CDH24-203ENST00000485922 CSRNP3Q8WYN3 585 aa32.5■■■□□ 2.79
CDH24-203ENST00000485922 TNIKQ9UKE5 1360 aa32.49■■■□□ 2.79
CDH24-203ENST00000485922 RUSC2Q8N2Y8 1516 aa32.41■■■□□ 2.78
CDH24-203ENST00000485922 GOLGA3Q08378 1498 aa32.39■■■□□ 2.78
CDH24-203ENST00000485922 CEP162Q5TB80 1403 aa32.38■■■□□ 2.77
CDH24-203ENST00000485922 TOP2BQ02880 1626 aa32.32■■■□□ 2.76
CDH24-203ENST00000485922 KIF21BO75037 1637 aa32.31■■■□□ 2.76
CDH24-203ENST00000485922 ZEB1P37275 1124 aaPredicted RBP32.31■■■□□ 2.76
CDH24-203ENST00000485922 DNAJC5BQ9UF47 199 aa32.31■■■□□ 2.76
CDH24-203ENST00000485922 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
CDH24-203ENST00000485922 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.76
CDH24-203ENST00000485922 UBTFP17480 764 aaKnown RBP32.17■■■□□ 2.74
CDH24-203ENST00000485922 PPARGC1BQ86YN6 1023 aaKnown RBP32.17■■■□□ 2.74
CDH24-203ENST00000485922 CFTRP13569 1480 aa32.14■■■□□ 2.74
CDH24-203ENST00000485922 PRDM2Q13029 1718 aa32.04■■■□□ 2.72
CDH24-203ENST00000485922 CUX1P39880 1505 aa31.96■■■□□ 2.71
CDH24-203ENST00000485922 ERICH3Q5RHP9 1530 aa31.91■■■□□ 2.7
CDH24-203ENST00000485922 RAPGEF2Q9Y4G8 1499 aa31.91■■■□□ 2.7
CDH24-203ENST00000485922 CLIP1P30622 1438 aa31.9■■■□□ 2.7
CDH24-203ENST00000485922 CADPSQ9ULU8 1353 aa31.87■■■□□ 2.69
CDH24-203ENST00000485922 PRXQ9BXM0 1461 aa31.83■■■□□ 2.69
CDH24-203ENST00000485922 KIF27Q86VH2 1401 aa31.8■■■□□ 2.68
CDH24-203ENST00000485922 VPS8Q8N3P4 1428 aa31.78■■■□□ 2.68
CDH24-203ENST00000485922 NESP48681 1621 aa31.76■■■□□ 2.67
CDH24-203ENST00000485922 LAMC3Q9Y6N6 1575 aa31.61■■■□□ 2.65
CDH24-203ENST00000485922 CCER1Q8TC90 406 aaPredicted RBP31.54■■■□□ 2.64
CDH24-203ENST00000485922 FANCD2Q9BXW9 1451 aa31.52■■■□□ 2.64
CDH24-203ENST00000485922 TTBK1Q5TCY1 1321 aaPredicted RBP31.51■■■□□ 2.63
CDH24-203ENST00000485922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.51■■■□□ 2.63
CDH24-203ENST00000485922 APLP2Q06481 763 aa31.51■■■□□ 2.63
CDH24-203ENST00000485922 CUX2O14529 1486 aa31.45■■■□□ 2.63
CDH24-203ENST00000485922 FGD5Q6ZNL6 1462 aa31.45■■■□□ 2.63
CDH24-203ENST00000485922 ARAP1Q96P48 1450 aa31.44■■■□□ 2.62
CDH24-203ENST00000485922 IGF1RP08069 1367 aa31.39■■■□□ 2.62
CDH24-203ENST00000485922 PDS5BQ9NTI5 1447 aa31.38■■■□□ 2.61
CDH24-203ENST00000485922 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
CDH24-203ENST00000485922 KIF21AQ7Z4S6 1674 aa31.32■■■□□ 2.6
CDH24-203ENST00000485922 RANGAP1P46060 587 aaPredicted RBP31.29■■■□□ 2.6
CDH24-203ENST00000485922 CARMIL1Q5VZK9 1371 aa31.26■■■□□ 2.59
CDH24-203ENST00000485922 ARHGAP35Q9NRY4 1499 aa31.25■■■□□ 2.59
CDH24-203ENST00000485922 TOPBP1Q92547 1522 aa31.23■■■□□ 2.59
CDH24-203ENST00000485922 ABCA10Q8WWZ4 1543 aa31.23■■■□□ 2.59
CDH24-203ENST00000485922 URB2Q14146 1524 aaKnown RBP31.18■■■□□ 2.58
CDH24-203ENST00000485922 POLA1P09884 1462 aaPredicted RBP31.16■■■□□ 2.58
CDH24-203ENST00000485922 CUL7Q14999 1698 aa31.08■■■□□ 2.57
CDH24-203ENST00000485922 MAP3K1Q13233 1512 aa31.07■■■□□ 2.56
CDH24-203ENST00000485922 HNRNPUL2Q1KMD3 747 aaKnown RBP31.07■■■□□ 2.56
CDH24-203ENST00000485922 RAD54L2Q9Y4B4 1467 aa31.04■■■□□ 2.56
CDH24-203ENST00000485922 ERCC6Q03468 1493 aa31.03■■■□□ 2.56
CDH24-203ENST00000485922 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
CDH24-203ENST00000485922 WDR97A6NE52 1622 aa31.01■■■□□ 2.55
CDH24-203ENST00000485922 RRBP1Q9P2E9 1410 aaKnown RBP31.01■■■□□ 2.55
CDH24-203ENST00000485922 KANK4Q5T7N3 995 aaPredicted RBP30.99■■■□□ 2.55
CDH24-203ENST00000485922 FHAD1B1AJZ9 1412 aa30.95■■■□□ 2.54
CDH24-203ENST00000485922 TIAM1Q13009 1591 aa30.91■■■□□ 2.54
CDH24-203ENST00000485922 EFCAB5A4FU69 1503 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms