RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
LRRFIP1-212ENST00000483443 ABCC9O60706 1549 aa29.17■■■□□ 2.26
LRRFIP1-212ENST00000483443 AEBP2Q6ZN18 517 aaPredicted RBP29.13■■■□□ 2.25
LRRFIP1-212ENST00000483443 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
LRRFIP1-212ENST00000483443 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
LRRFIP1-212ENST00000483443 NACADO15069 1562 aa27.52■■■□□ 2
LRRFIP1-212ENST00000483443 DNAJC5BQ9UF47 199 aa27.37■■□□□ 1.97
LRRFIP1-212ENST00000483443 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
LRRFIP1-212ENST00000483443 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
LRRFIP1-212ENST00000483443 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
LRRFIP1-212ENST00000483443 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
LRRFIP1-212ENST00000483443 UNC13AQ9UPW8 1703 aa26.99■■□□□ 1.91
LRRFIP1-212ENST00000483443 BICRAQ9NZM4 1560 aa26.85■■□□□ 1.89
LRRFIP1-212ENST00000483443 ZCCHC6Q5VYS8 1495 aaKnown RBP26.75■■□□□ 1.87
LRRFIP1-212ENST00000483443 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.87
LRRFIP1-212ENST00000483443 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
LRRFIP1-212ENST00000483443 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
LRRFIP1-212ENST00000483443 CC2D2AQ9P2K1 1620 aa26.33■■□□□ 1.81
LRRFIP1-212ENST00000483443 CECR2Q9BXF3 1484 aa26.32■■□□□ 1.8
LRRFIP1-212ENST00000483443 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
LRRFIP1-212ENST00000483443 NCAPD3P42695 1498 aa25.39■■□□□ 1.65
LRRFIP1-212ENST00000483443 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
LRRFIP1-212ENST00000483443 ERCC6Q03468 1493 aa25.28■■□□□ 1.64
LRRFIP1-212ENST00000483443 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
LRRFIP1-212ENST00000483443 CUX2O14529 1486 aa25.26■■□□□ 1.63
LRRFIP1-212ENST00000483443 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
LRRFIP1-212ENST00000483443 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
LRRFIP1-212ENST00000483443 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
LRRFIP1-212ENST00000483443 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
LRRFIP1-212ENST00000483443 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
LRRFIP1-212ENST00000483443 NESP48681 1621 aa24.99■■□□□ 1.59
LRRFIP1-212ENST00000483443 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
LRRFIP1-212ENST00000483443 LAMC3Q9Y6N6 1575 aa24.87■■□□□ 1.57
LRRFIP1-212ENST00000483443 MROH2BQ7Z745 1585 aa24.86■■□□□ 1.57
LRRFIP1-212ENST00000483443 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
LRRFIP1-212ENST00000483443 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
LRRFIP1-212ENST00000483443 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
LRRFIP1-212ENST00000483443 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
LRRFIP1-212ENST00000483443 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
LRRFIP1-212ENST00000483443 WIZO95785 1651 aa24.54■■□□□ 1.52
LRRFIP1-212ENST00000483443 MRC2Q9UBG0 1479 aa24.52■■□□□ 1.52
LRRFIP1-212ENST00000483443 WDR62O43379 1518 aa24.45■■□□□ 1.5
LRRFIP1-212ENST00000483443 PHF23Q9BUL5 403 aaPredicted RBP24.42■■□□□ 1.5
LRRFIP1-212ENST00000483443 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
LRRFIP1-212ENST00000483443 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
LRRFIP1-212ENST00000483443 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
LRRFIP1-212ENST00000483443 CFTRP13569 1480 aa24.31■■□□□ 1.48
LRRFIP1-212ENST00000483443 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
LRRFIP1-212ENST00000483443 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
LRRFIP1-212ENST00000483443 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
LRRFIP1-212ENST00000483443 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
LRRFIP1-212ENST00000483443 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
LRRFIP1-212ENST00000483443 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
LRRFIP1-212ENST00000483443 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
LRRFIP1-212ENST00000483443 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
LRRFIP1-212ENST00000483443 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
LRRFIP1-212ENST00000483443 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
LRRFIP1-212ENST00000483443 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
LRRFIP1-212ENST00000483443 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
LRRFIP1-212ENST00000483443 RIMBP3CA6NJZ7 1639 aa23.72■■□□□ 1.39
LRRFIP1-212ENST00000483443 RIMBP3BA6NNM3 1639 aa23.72■■□□□ 1.39
LRRFIP1-212ENST00000483443 RIMBP3Q9UFD9 1639 aa23.72■■□□□ 1.39
LRRFIP1-212ENST00000483443 ARHGEF11O15085 1522 aa23.66■■□□□ 1.38
LRRFIP1-212ENST00000483443 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
LRRFIP1-212ENST00000483443 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.37
LRRFIP1-212ENST00000483443 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
LRRFIP1-212ENST00000483443 FBLN2P98095 1184 aa23.55■■□□□ 1.36
LRRFIP1-212ENST00000483443 CHD1O14646 1710 aa23.53■■□□□ 1.36
LRRFIP1-212ENST00000483443 SOGA1O94964 1423 aa23.5■■□□□ 1.35
LRRFIP1-212ENST00000483443 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
LRRFIP1-212ENST00000483443 CYB5RLQ6IPT4 315 aa23.49■■□□□ 1.35
LRRFIP1-212ENST00000483443 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
LRRFIP1-212ENST00000483443 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
LRRFIP1-212ENST00000483443 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
LRRFIP1-212ENST00000483443 SNAPC4Q5SXM2 1469 aa23.41■■□□□ 1.34
LRRFIP1-212ENST00000483443 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
LRRFIP1-212ENST00000483443 CUX1P39880 1505 aa23.38■■□□□ 1.33
LRRFIP1-212ENST00000483443 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
LRRFIP1-212ENST00000483443 CHMP7Q8WUX9 453 aaPredicted RBP23.36■■□□□ 1.33
LRRFIP1-212ENST00000483443 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
LRRFIP1-212ENST00000483443 SYNJ1O43426 1573 aa23.33■■□□□ 1.33
LRRFIP1-212ENST00000483443 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
LRRFIP1-212ENST00000483443 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
LRRFIP1-212ENST00000483443 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
LRRFIP1-212ENST00000483443 FOXD1Q16676 465 aa23.25■■□□□ 1.31
LRRFIP1-212ENST00000483443 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
LRRFIP1-212ENST00000483443 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
LRRFIP1-212ENST00000483443 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
LRRFIP1-212ENST00000483443 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
LRRFIP1-212ENST00000483443 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
LRRFIP1-212ENST00000483443 WRNQ14191 1432 aaPredicted RBP eCLIP23.1■■□□□ 1.29
LRRFIP1-212ENST00000483443 GRIN2AQ12879 1464 aa23.03■■□□□ 1.28
LRRFIP1-212ENST00000483443 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
LRRFIP1-212ENST00000483443 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
LRRFIP1-212ENST00000483443 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
LRRFIP1-212ENST00000483443 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.26
LRRFIP1-212ENST00000483443 NUP160Q12769 1436 aa22.94■■□□□ 1.26
LRRFIP1-212ENST00000483443 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
LRRFIP1-212ENST00000483443 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
LRRFIP1-212ENST00000483443 ERCC6L2Q5T890 1561 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms